KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:17:12 2014 Check: 00 .. Name: ENSTTRP00000008006/1-608 Len: 611 Check: 4935 Weight: 1.00 Name: bmy_08078T0/1-508 Len: 611 Check: 6765 Weight: 1.00 Name: ENSP00000315931/1-611 Len: 611 Check: 1382 Weight: 1.00 Name: ENSBTAP00000002300/1-611 Len: 611 Check: 1559 Weight: 1.00 // 1 50 ENSTTRP00000008006/1-608 MSVQVVSAAA AAKVPEVELK DLSPSEAEPQ LGLSTAAVSA MAPPAGGGDP bmy_08078T0/1-508 ---------- ---------- ---------- ---------- ---------- ENSP00000315931/1-611 MSVQVVSAAA AAKVPEVELK DLSPSEAESQ LGLSTAAVGA MAPPAGGGDP ENSBTAP00000002300/1-611 MSVQVVSAAA AAKVPEVELK DLSPSEAEPQ LGLSTAAVSA MAPPAGGGDP 51 100 ENSTTRP00000008006/1-608 EAPAPVAERP PAPGPGSGPA AALSPAAGKV PQASAMKRSD PHHQHQRHRD bmy_08078T0/1-508 ---------- ---------- ---------- ---------- ---------- ENSP00000315931/1-611 EAPAPAAERP PVPGPGSGPA AALSPAAGKV PQASAMKRSD PHHQHQRHRD ENSBTAP00000002300/1-611 EAPAPAAERP PAPGPGSGPA AALSPAAGKV PQASAMKRSD PHHQHQRHRD 101 150 ENSTTRP00000008006/1-608 GGEALVSPDG TVTEAPRTVK KQIQFADQKQ EFNKRPTKIG RRSLSRSISQ bmy_08078T0/1-508 ---MLSNKKK YIVNGNSGIK AQIQFADQKQ EFNKRPTKIG RRSLSRSISQ ENSP00000315931/1-611 GGEALVSPDG TVTEAPRTVK KQIQFADQKQ EFNKRPTKIG RRSLSRSISQ ENSBTAP00000002300/1-611 GGEALVSPDG TVTEAPRTVK KQIQFADQKQ EFNKRPTKIG RRSLSRSISQ 151 200 ENSTTRP00000008006/1-608 SSTDSYSSAA SYTDSSDDET SPRDKQQKNS KGSSDFCVKN IKQAEFGRRE bmy_08078T0/1-508 SSTDSYSSAA SYTDSSDDET SPRDKQQKNS KGSSDFCVKN IKQAEFGRRE ENSP00000315931/1-611 SSTDSYSSAA SYTDSSDDET SPRDKQQKNS KGSSDFCVKN IKQAEFGRRE ENSBTAP00000002300/1-611 SSTDSYSSAA SYTDSSDDET SPRDKQQKNS KGNSDFCVKN IKQAEFGRRE 201 250 ENSTTRP00000008006/1-608 IEIAEQEMPA LMALRKRAQG EKPLAGAKIV GCTHITAQTA VLMETLGALG bmy_08078T0/1-508 IEIAEQEMPA LMALRKRAQG EKPLAGAKIV GCTHITAQTA VLMETLGALG ENSP00000315931/1-611 IEIAEQEMPA LMALRKRAQG EKPLAGAKIV GCTHITAQTA VLMETLGALG ENSBTAP00000002300/1-611 IEIAEQEMPA LMALRKRAQG EKPLAGAKIV GCTHITAQTA VLMETLGALG 251 300 ENSTTRP00000008006/1-608 AQCRWAACNI YSTLNEVAAA LAENGFPVFA WKGESEDDFW WCIDRCVNVE bmy_08078T0/1-508 AQCRWAACNI YSTLNEVAAA LAENGFPVFA WKGESEDDFW WCIDRCVNVE ENSP00000315931/1-611 AQCRWAACNI YSTLNEVAAA LAESGFPVFA WKGESEDDFW WCIDRCVNVE ENSBTAP00000002300/1-611 AQCRWAACNI YSTLNEVAAA LAESGFPVFA WKGESEDDFW WCIDRCVNVE 301 350 ENSTTRP00000008006/1-608 GWQPNMILDD GGDLTHWIYK KYPNMFKKIK GIVEESVTGV HRLYQLSKAG bmy_08078T0/1-508 GWQPNMILDD GGDLTHWIYK KYPNMFKKIK GIVEESVTGV HRLYQLSKAG ENSP00000315931/1-611 GWQPNMILDD GGDLTHWIYK KYPNMFKKIK GIVEESVTGV HRLYQLSKAG ENSBTAP00000002300/1-611 GWQPNMILDD GGDLTHWIYK KYPNMFKKIK GIVEESVTGV HRLYQLSKAG 351 400 ENSTTRP00000008006/1-608 KLCVPAMNVN DSVTKQKFDN LYCCRESILD GLKRTTDMMF GGKQVVVCGY bmy_08078T0/1-508 KLCVPAMNVN DSVTKQKFDN LYCCRESILD GLKRTTDMMF GGKQVVVCGY ENSP00000315931/1-611 KLCVPAMNVN DSVTKQKFDN LYCCRESILD GLKRTTDMMF GGKQVVVCGY ENSBTAP00000002300/1-611 KLCVPAMNVN DSVTKQKFDN LYCCRESILD GLKRTTDMMF GGKQVVVCGY 401 450 ENSTTRP00000008006/1-608 GEVGKGCCAA LKAMGSIVYV TEIDPICALQ AXXXXXXXXX XXXXXXXXXX bmy_08078T0/1-508 GEVGKGCCAA LKAMGSIVYV TEIDPICALQ ACMDGFRLVK LNEVIRQVDI ENSP00000315931/1-611 GEVGKGCCAA LKAMGSIVYV TEIDPICALQ ACMDGFRLVK LNEVIRQVDI ENSBTAP00000002300/1-611 GEVGKGCCAA LKAMGSIVYV TEIDPICALQ ACMDGFRLVK LNEVIRQVDI 451 500 ENSTTRP00000008006/1-608 XXXXXXNKNV VTREHLDRMK NSCIVCNMGH SNTEIDVASL RTPELTWERV bmy_08078T0/1-508 VITCTGNKNV VTREHLDRMK NSCIVCNMGH SNTEIDVASL RTPELTWERV ENSP00000315931/1-611 VITCTGNKNV VTREHLDRMK NSCIVCNMGH SNTEIDVASL RTPELTWERV ENSBTAP00000002300/1-611 VITCTGNKNV VTREHLDRMK NSCIVCNMGH SNTEIDVASL RTPELTWERV 501 550 ENSTTRP00000008006/1-608 RSQVDHVIWP DGKRIVLLAE GRLLNLSCST VPTFVLSITA TTQ-LCLI-L bmy_08078T0/1-508 RSQVDHVIWP DGKRIVLLAE GRLLNLSCST VPTFVLSITA TTQALALIEL ENSP00000315931/1-611 RSQVDHVIWP DGKRIVLLAE GRLLNLSCST VPTFVLSITA TTQALALIEL ENSBTAP00000002300/1-611 RSQVDHVIWP DGKRIILLAE GRLLNLSCST VPTFVLSITA TTQALALIEL 551 600 ENSTTRP00000008006/1-608 Y-APEXXXXX XXXXXXXXXX EYVASLHLPT FDAHLTELTD EQAKYLGLNK bmy_08078T0/1-508 YNAPEGRYKQ DVYLLPKKMD EYVASLHLPT FDAHLTELTD EQAKYLGLNK ENSP00000315931/1-611 YNAPEGRYKQ DVYLLPKKMD EYVASLHLPT FDAHLTELTD EQAKYLGLNK ENSBTAP00000002300/1-611 YNAPEGRYKQ DVYLLPKKMD EYVASLHLPT FDAHLTELTD EQAKYLGLNK 601 650 ENSTTRP00000008006/1-608 NGPFKPNYYR Y bmy_08078T0/1-508 NGPFKPNYYR Y ENSP00000315931/1-611 NGPFKPNYYR Y ENSBTAP00000002300/1-611 NGPFKPNYYR Y