KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:13 2014 Check: 00 .. Name: bmy_02653T0/1-334 Len: 353 Check: 2059 Weight: 1.00 Name: ENSP00000305071/1-260 Len: 353 Check: 1917 Weight: 1.00 Name: BACU016635/1-260 Len: 353 Check: 3400 Weight: 1.00 Name: ENSTTRP00000007257/1-260 Len: 353 Check: 4426 Weight: 1.00 Name: ENSBTAP00000002309/1-260 Len: 353 Check: 2774 Weight: 1.00 // 1 50 bmy_02653T0/1-334 LKGQKQLLQL QPFRTFGGRG RAGAVEALCG VGSGRVSSCS LSRQKKPGCR ENSP00000305071/1-260 ---------- ---------- ---------- ---------- ---------- BACU016635/1-260 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000007257/1-260 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002309/1-260 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_02653T0/1-334 GSRLHFATHY INWKRKVCEL GPQVWGDPGL RRGVTEEARW SFPMEPTQPA ENSP00000305071/1-260 ---------- ---------- ---------- ---------- ---MELTQPA BACU016635/1-260 ---------- ---------- ---------- ---------- ---MEPTQPA ENSTTRP00000007257/1-260 ---------- ---------- ---------- ---------- ---MEPTQPA ENSBTAP00000002309/1-260 ---------- ---------- ---------- ---------- ---MEHTQPA 101 150 bmy_02653T0/1-334 EDLSLTQQPS TPEFGDPEDP RGEAPDGSDT VVLSLFPCTP EPGNPEPDAG ENSP00000305071/1-260 EDLIQTQQTP ASELGDPEDP GEEAADGSDT VVLSLFPCTP EPVNPEPDAS BACU016635/1-260 EDLSLTQQPS TPEFGDPEDP RGEAPDGSDT VVLSLFPCTP EPGNPEPDAG ENSTTRP00000007257/1-260 EDLSLTQQPS TPEFGDPEDP RGEAPDGSDT VVLSLFPCTP EPGNPEPDSG ENSBTAP00000002309/1-260 EDLSLTQQPL TPEFGDPEDP RDEAPDGSDT VVLSLFPCTP EPGNPESDAG 151 200 bmy_02653T0/1-334 TSSPQAGSSL KHSTTLTNRQ RGNEVSALPA TLDSLSIHQL AAQGELSQLK ENSP00000305071/1-260 VSSPQAGSSL KHSTTLTNRQ RGNEVSALPA TLDSLSIHQL AAQGELDQLK BACU016635/1-260 TSSPQAGSSL KHSTTLTNRQ RGNEVSALPA TLDSLSIHQL AAQGELSQLK ENSTTRP00000007257/1-260 TSSPQAGSSL KHSTTLTNRQ RGNEVSALPA TLDSLSIHQL AAQGELSQLK ENSBTAP00000002309/1-260 SSSPQAGNSL KHSTTLTNRQ RGNEVSALPA TLDSLSIHQL AAQGELSQLK 201 250 bmy_02653T0/1-334 EHLRKGDNLI NKPDERGFTP LIWASAFGEI ETVRFLLEWG ADPHILAKER ENSP00000305071/1-260 EHLRKGDNLV NKPDERGFTP LIWASAFGEI ETVRFLLEWG ADPHILAKER BACU016635/1-260 EHLRKGDNLI NKPDERGFTP LIWASAFGEI ETVRFLLEWG ADPHILAKER ENSTTRP00000007257/1-260 EHLRKGDNLI NKPDERGFTP LIWASAFGEI ETVRFLLEWG ADPHILAKER ENSBTAP00000002309/1-260 EHLRKGDNLI NKPDERGFTP LIWASAFGEI ETVRFLLEWG ADPHILAKER 251 300 bmy_02653T0/1-334 ESALSLASTG GYTDI----- ---------- -NGGTPLLYA VRGNHVKCVE ENSP00000305071/1-260 ESALSLASTG GYTDIVGLLL ERDVDINIYD WNGGTPLLYA VRGNHVKCVE BACU016635/1-260 ESALSLASTG GYTDIVGLLL ERDVDINIYD WNGGTPLLYA VRGNHVKCVE ENSTTRP00000007257/1-260 ESALSLASTG GYTDIVGLLL ERDVDINIYD WNGGTPLLYA VRGNHVKCVE ENSBTAP00000002309/1-260 ESALSLASTG GYTDIVGLLL ERDVDINIYD WNGGTPLLYA VRGNHVKCVE 301 350 bmy_02653T0/1-334 ALLARGADLT TEADSGYTPM DLAVALGYRK GQPEAHGASD RGHNGGTCRH ENSP00000305071/1-260 ALLARGADLT TEADSGYTPM DLAVALGYRK VQQVIENHIL KLFQSNLVPA BACU016635/1-260 ALLARGADLT TEADSGYTPM DLAVALGYRK VQQVIENHIL KLFQSNLVPA ENSTTRP00000007257/1-260 ALLARGADLT TEADSGYTPM DLAVALGYRK VQQVIENHIL KLFQSNLVPA ENSBTAP00000002309/1-260 ALLARGADLT TEADSGYTPM DLAVALGYRK VQQVIENHIL KLFQSNLVPA 351 400 bmy_02653T0/1-334 --- ENSP00000305071/1-260 DPE BACU016635/1-260 TPE ENSTTRP00000007257/1-260 TPE ENSBTAP00000002309/1-260 DPE