KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:13 2014 Check: 00 .. Name: ENSP00000332823/1-139 Len: 157 Check: 8104 Weight: 1.00 Name: ENSBTAP00000002311/1-140 Len: 157 Check: 820 Weight: 1.00 Name: ENSTTRP00000007262/1-140 Len: 157 Check: 1722 Weight: 1.00 Name: bmy_02654T0/1-120 Len: 157 Check: 6162 Weight: 1.00 Name: BACU019343/1-157 Len: 157 Check: 7555 Weight: 1.00 // 1 50 ENSP00000332823/1-139 MTHSLVCPET VSRVSSVLNR NTRQFGKKHL FDQDEETCWN SDQGPSQWVT ENSBTAP00000002311/1-140 MAHSLVCPET VSRVSSVLNR NTRQFGKKHL FDQDEETCWN SDQGPSQWVT ENSTTRP00000007262/1-140 MTHSLVCPET VSRVSSVLNR NTRQFGKKHL FDQDEETCWN SDQGPSQWVI bmy_02654T0/1-120 MTHSLVCPET VSRVSSVLNR NTRQFGKKHL FDQDEETCWN SDQGPSQWVI BACU019343/1-157 MTHSLVCPET VSRVSSVLNR NTRQFGKKHL FDQDEETCWN SDQGPSQWVI 51 100 ENSP00000332823/1-139 LEFPQLIRVS QLQIQFQGGF SSRRGCLEGS QGTQALHKIV DFYPEDNNSL ENSBTAP00000002311/1-140 LEFPQCICVS QLQIQFQGGF SSRQGRLEGS LGSEALSKIV DFYPEDNNSL ENSTTRP00000007262/1-140 LEFPQRICVS QLQIQFQGGF SSRQGRLEGS QGSEALSKIV DFYPEDNNSL bmy_02654T0/1-120 LEFPQRICVS QLQIQFQGGF SSRQGRLEGS QGSEALSKI- ---------- BACU019343/1-157 LEFPQRICVS QLQIQFQGGF SSRQGRLEGS QGSEALSKIV DFYPEDNNSL 101 150 ENSP00000332823/1-139 Q--------- --------TF PIPAAEVDRL KVTFEDATDF FGRVVIYHLR ENSBTAP00000002311/1-140 Q--------- --------TF PVPPAEVDRL KVTFEDTTDF FGRVVIYHLR ENSTTRP00000007262/1-140 Q--------- --------TF PVPSAEVDRL KVTFEDTTDF FGRVVIYHLR bmy_02654T0/1-120 ---------- ---------- ------VDRL KVTFEDATDF FGRVVIYHLR BACU019343/1-157 QISCPSLWAS VSLDCPAYTF PVPSAEVDRL KVTFEDATDF FGRVVIYHLR 151 200 ENSP00000332823/1-139 VLGEKV- ENSBTAP00000002311/1-140 VLGKKKE ENSTTRP00000007262/1-140 VLGEKKV bmy_02654T0/1-120 VLGEKKV BACU019343/1-157 VLGEKKV