KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:15 2014 Check: 00 .. Name: ENSP00000029410/1-327 Len: 358 Check: 2645 Weight: 1.00 Name: ENSBTAP00000002315/1-327 Len: 358 Check: 1162 Weight: 1.00 Name: ENSTTRP00000014922/1-325 Len: 358 Check: 4477 Weight: 1.00 Name: bmy_13654T0/1-358 Len: 358 Check: 1136 Weight: 1.00 Name: BACU002889/1-271 Len: 358 Check: 507 Weight: 1.00 // 1 50 ENSP00000029410/1-327 ---------- ---------- ---------- -MFPSRRKAA QLPWEDGRSG ENSBTAP00000002315/1-327 ---------- ---------- ---------- -MFPSRRKAA QLPWEDGRSR ENSTTRP00000014922/1-325 ---------- ---------- ---------- -MFPSRRKTA QLPWEDGXXX bmy_13654T0/1-358 AGREAEAPRR PGRPGRPGWE LEPHEPPPPP TMFPSRRKTA QLPWEDGRSR BACU002889/1-271 ---------- ---------- ---------- ---------- -MAW------ 51 100 ENSP00000029410/1-327 LLSGGLPRKC SVFHLFVACL SLGFFSLLWL QLSCSGDVAR AVRGQGQETS ENSBTAP00000002315/1-327 LIPSGLPRKC SVFHLFVACL LLGFLSLLWL QLSCSGDVAR TARGQGQETP ENSTTRP00000014922/1-325 XXXXXXXXXX XXXXXXXXXX XXXXXSLLWL QLSCSGDVDR A--GQGQETP bmy_13654T0/1-358 LIPSGLPRKC SVFHLFVACL LLGFLSLLWL QLSCSGDMAR AARGQGQETP BACU002889/1-271 ---------- ---------- ---------- ---------- AARGQGQETP 101 150 ENSP00000029410/1-327 GPPRACPPEP PPEHWEEDAS WGPHRLAVLV PFRERFEELL VFVPHMRRFL ENSBTAP00000002315/1-327 GPLRACPPEP PREHWEEDES WGPHRLAVLV PFRERFEELL VFVPHMHRFL ENSTTRP00000014922/1-325 GPSRACPPEP PPEHWEEDES WGPHRLAVLV PFRERFEELL VFVPHMHRFL bmy_13654T0/1-358 GPSRACPPEP PPEHWEEDES WGPHRLAVLV PFRERFEELL VFVPHMHRFL BACU002889/1-271 GPSRACPPEP PPEHWEEDES WGPHRLAVLV PFRERFEELL VFVPHMHRFL 151 200 ENSP00000029410/1-327 SRKKIRHHIY VLNQVDHFRF NRAALINVGF LESSNSTDYI AMHDVDLLPL ENSBTAP00000002315/1-327 SKKKIQHHIY VLNQVDHFRF NRAALINAGF LESGNSTDYI AMHDVDLLPL ENSTTRP00000014922/1-325 SRKKIQHHIY VLNQVDHFRF NRAALINAGF LESSNSTDYI AMHDVDLLPL bmy_13654T0/1-358 SRKKIQHHIY VLNQVDHFRF NRAALINAGF LESSNSTDYI AMHDVDLLPL BACU002889/1-271 SRKKIQHHIY VLNQVDHFRF NRAALINAGF LESSNSTDYI AMHDVDLLPL 201 250 ENSP00000029410/1-327 NEELDYGFPE AGPFHVASPE LHPLYHYKTY VGGILLLSKQ HYRLCNGMSN ENSBTAP00000002315/1-327 NEELDYGFPE AGPFHVASPE LHPLYHYKTY VGGILLLSKQ HYQLCNGMSN ENSTTRP00000014922/1-325 NEELDYGFPE TGPFHVASPE LHPLYHYKTY VGGILLLSKQ HYQLCNGMSN bmy_13654T0/1-358 NEELDYGFPE TGPFHVASPE LHPLYHYKTY VGGILLLSKQ HYQLCNGMSN BACU002889/1-271 NEELDYGFPE TGPFHVASPE LHPLYHYKTY VGGILLLSKQ HYQLCNGMSN 251 300 ENSP00000029410/1-327 RFWGWGREDD EFYRRIKGAG LQLFRPSGIT TGYKTFRHLH DPAWRKRDQK ENSBTAP00000002315/1-327 RFWGWGREDD EFYRRIKGAG LQLFRPSGIT TGYKTFRHLH DPAWRKRDQK ENSTTRP00000014922/1-325 RFWGWGREDD EFYRRIKGAG LQLFRPSGIT TGYKTFRHLH DPAWRKRDQK bmy_13654T0/1-358 RFWGWGREDD EFYRRIKGAR LQLFRPSGIT TGYKTFRHLH DPAWRKRDQK BACU002889/1-271 RFWGWGREDD EFYRRIKGAG LQLFRPSGIT TGYKTFRHLH DPAWRKRDQK 301 350 ENSP00000029410/1-327 RIAAQKQEQF KVDREGGLNT VKYHVASRTA LSVGGAPCTV LNIMLDCDKT ENSBTAP00000002315/1-327 RIAAQKQEQF KVDREGGLST VKYRVDSRTA LSVGGAPCTV LNILLDCDKA ENSTTRP00000014922/1-325 RIAAQKQEQF RVDREGGLST VKYRVDSRTA LSVGGAPCTV LNIMLDCDKA bmy_13654T0/1-358 RIAAQKQEQF RVDREGGLST VKYRVDSRTA LSVGGAPCTV LNIMLDCDKA BACU002889/1-271 RIAAQKQEQF RVDREGGLST VKYRVDSRTA LSVGGAPCTV LNIMLDCDKA 351 400 ENSP00000029410/1-327 ATPWCTFS ENSBTAP00000002315/1-327 ATPWCTFS ENSTTRP00000014922/1-325 ATPWCTFS bmy_13654T0/1-358 ATPWCTFS BACU002889/1-271 ATPWCTFS