KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:16 2014 Check: 00 .. Name: ENSTTRP00000012649/1-511 Len: 701 Check: 8745 Weight: 1.00 Name: BACU004911/1-659 Len: 701 Check: 3359 Weight: 1.00 Name: ENSP00000369465/1-528 Len: 701 Check: 8512 Weight: 1.00 Name: bmy_01260T0/1-473 Len: 701 Check: 450 Weight: 1.00 Name: ENSBTAP00000002316/1-512 Len: 701 Check: 5850 Weight: 1.00 // 1 50 ENSTTRP00000012649/1-511 MATRVEEASR GRGGGAEEAV EAGRGGRRRS PRQKFVIGTM EEAGMCGLGV BACU004911/1-659 ---------- ---------- ---------- ----FVIGTM EEAGMCGLGV ENSP00000369465/1-528 MATRVEEAAR GRGGGAEEAT EAGRGGRRRS PRQKFEIGTM EEAGICGLGV bmy_01260T0/1-473 ---------- ---------- ---------- ---------M EEAGMCGLGV ENSBTAP00000002316/1-512 MATRVEEAAR GRGGGAEEAV EAGRGGRRRS PRQKFVIGTM EEAGMCGLGV 51 100 ENSTTRP00000012649/1-511 KTDMLHNSQS NDILQHQGSH CGGTSNKHSL EEDAHSDFIT KGRSLVSPEY BACU004911/1-659 KTDMLHNSQS NDILQHQGSH CGGTSNKHSL EEDAHSDFIT KGRSLVSPAY ENSP00000369465/1-528 KADMLCNSQS NDILQHQGSN CGGTSNKHSL EEDEGSDFIT ENRNLVSPAY bmy_01260T0/1-473 KTDMLHNSQS NDILQHQGSH CGGTSNKHSL EEDAHSDFIT KGRSLVSPAY ENSBTAP00000002316/1-512 KADMLHNSQS NDILQHQDSH CGSTSNKHSL EEDARSDFIT KGRSLVSPAY 101 150 ENSTTRP00000012649/1-511 CTRESREEIP GREARTDPPD GQQDSECDRN KDKTLGKEVL LLMQALNTLS BACU004911/1-659 CTQESREEFP GREARTDPPD GQQDSECDRN KDKTLGKEVL LLMQALNTLS ENSP00000369465/1-528 CTQESREEIP GGEARTDPPD GQQDSECNRN KEKTLGKEVL LLMQALNTLS bmy_01260T0/1-473 CTQESREEIP GREARTDPPD GQQDSECDRN KDKTLGKEVL LLMQALNTLS ENSBTAP00000002316/1-512 CTRESREEIP GREARTDPPD GQQDSECSRS KDKALGKEVL LLMQALNTLS 151 200 ENSTTRP00000012649/1-511 TPEEKLAALC KKYADLLEES RNVQKQMKIL QKKQAQIVKE KVHLQSEHSK BACU004911/1-659 TPEEKLAALC KKYADLLEES RNVQKQMKIL QKKQAQIVKE KVHLQSEHSK ENSP00000369465/1-528 TPEEKLAALC KKYADLLEES RSVQKQMKIL QKKQAQIVKE KVHLQSEHSK bmy_01260T0/1-473 TPEEKLAALC KKYADLLEES RNVQKQMKIL QKKQAQIVKE KVHLQSEHSK ENSBTAP00000002316/1-512 TPEEKLAALC KKYADLLEES RNVQKQMKIL QKKQAQIMKE KVHLQSEHSK 201 250 ENSTTRP00000012649/1-511 AILARSKLES LCRELQRHNK TLKXXXXXXX XXXXXXXXXX XXXXXXXXXX BACU004911/1-659 AILARSKLES LCRELQRHNK TLKEENMQQA REEEERRKEA TAHFQITLNE ENSP00000369465/1-528 AILARSKLES LCRELQRHNK TLKEENMQQA REEEERRKEA TAHFQITLNE bmy_01260T0/1-473 AILARSKLES LCRELQRHNK TLKEENMQQA REEEERRKEA TAHFQITLNE ENSBTAP00000002316/1-512 AILARSKLES LCRELQRHNK TLKEENMQQA REEEERRKEA TAHFQITLNE 251 300 ENSTTRP00000012649/1-511 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXHI DKVFKHKELQ BACU004911/1-659 IQAQLEQHDI HNAKLRQENV ELGEKLKKLI EQYALREEHI DKVFKHKELQ ENSP00000369465/1-528 IQAQLEQHDI HNAKLRQENI ELGEKLKKLI EQYALREEHI DKVFKHKELQ bmy_01260T0/1-473 IQAQLEQHDI HNAKLRQENV ELGEKLKKLI EQYALREEHI DKVFKHKELQ ENSBTAP00000002316/1-512 IQAQLEQHDM HNAKLRQENI ELGEKLKKLI EQYALREEHI DKVFKHKELQ 301 350 ENSTTRP00000012649/1-511 QQLVDAKLQQ TTQLIKEADE KHQREREFLL KEATESRHKY EQMKQQEVQL BACU004911/1-659 QQLVDAKLQQ TTQLIKEADE KHQREREFLL KEATESRHKY EQMKQQEVQL ENSP00000369465/1-528 QQLVDAKLQQ TTQLIKEADE KHQREREFLL KEATESRHKY EQMKQQEVQL bmy_01260T0/1-473 QQLVDAKLQQ TTQLIKEADE KHQREREFLL KEATESRHKY EQMKQQEVQL ENSBTAP00000002316/1-512 QQLVDAKLQQ TTQLIKEADE KHQREREFLL KEATESRHKY EQMKQQEIQL 351 400 ENSTTRP00000012649/1-511 KQQLSLYMDK FEEFQTTMAK SNELFTTFRQ EMEKMTKKIK KLEKETIIWR BACU004911/1-659 KQQLSLYMDK FEEFQTTMAK SNELFTTFRQ EMEKLSLYMD KFEE----FQ ENSP00000369465/1-528 KQQLSLYMDK FEEFQTTMAK SNELFTTFRQ EMEKMTKKIK KLEKETIIWR bmy_01260T0/1-473 KQQLSLYMDK FEEFQTTMAK SNELFTTFRQ EMEKMTKKIK KLEKETIIWR ENSBTAP00000002316/1-512 KQQLSLYMDK FEEFQTTMAK SNELFTTFRQ EMEKMTKKIK KLEKETIVWR 401 450 ENSTTRP00000012649/1-511 TKWENNNK-- -ALLQMAEEK TVRDKEYKAF HIKLERLEKL CRALQTERNE BACU004911/1-659 TTMAKSNELF TTFRQEMEKK TVRDKEYKAF HIKLEQLEKL CRALQTERNE ENSP00000369465/1-528 TKWENNNK-- -ALLQMAEEK TVRDKEYKAL QIKLERLEKL CRALQTERNE bmy_01260T0/1-473 TKWENNNK-- -ALLQMAEEK TVRDKEYKAF HIKLERLEKL CRALQTERNE ENSBTAP00000002316/1-512 TKWENNNK-- -ALLQMAEEK TVRDKEYKAF QIKLERLEKL CRALQTERNE 451 500 ENSTTRP00000012649/1-511 LSEKVEVLKE QV-----GRA AGGGPAPPRA QPCAAPASAE EPSAAWQSTA BACU004911/1-659 LSEKVEVLKE QVS----GRS AGGGPAPXXX XXXXXXXXXX XXXXXXXXXX ENSP00000369465/1-528 LNEKVEVLKE QVSIKAAIKA ANRDLATPVM QPCTALDSHK ELNTSSKRAL bmy_01260T0/1-473 LSEKVEVLKE QVS----GRA AGGGPAPPGA QPCAAPASAE EPSAAWQSTA ENSBTAP00000002316/1-512 LNEKVEVLKE QVS----GRA AGGGPAPPEA QPCATSAPPE ESGATWQSAA 501 550 ENSTTRP00000012649/1-511 RVSPEAE--- ---------S LGAGPSIESV D--------- ---------- BACU004911/1-659 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000369465/1-528 GAHLEAEPKS QRSAVQKPPS TGSAPAIESV D--------- ---------- bmy_01260T0/1-473 RVSPEAE--- ---------S PGAGPSIESV D--------- ---------- ENSBTAP00000002316/1-512 RVIPEAG--- ---------S LGAGPGIESV D--------- ---------- 551 600 ENSTTRP00000012649/1-511 ---------- ---------- ---------- ---------- ---------- BACU004911/1-659 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000369465/1-528 ---------- ---------- ---------- ---------- ---------- bmy_01260T0/1-473 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002316/1-512 ---------- ---------- ---------- ---------- ---------- 601 650 ENSTTRP00000012649/1-511 ---------- ---------- ---------- ---------- ---------- BACU004911/1-659 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000369465/1-528 ---------- ---------- ---------- ---------- ---------- bmy_01260T0/1-473 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002316/1-512 ---------- ---------- ---------- ---------- ---------- 651 700 ENSTTRP00000012649/1-511 ---------- ---------- ---------- ---------- ---------- BACU004911/1-659 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXIL ENSP00000369465/1-528 ---------- ---------- ---------- ---------- ---------- bmy_01260T0/1-473 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002316/1-512 ---------- ---------- ---------- ---------- ---------- 701 750 ENSTTRP00000012649/1-511 - BACU004911/1-659 V ENSP00000369465/1-528 - bmy_01260T0/1-473 - ENSBTAP00000002316/1-512 -