KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:17 2014 Check: 00 .. Name: ENSP00000467107/1-566 Len: 596 Check: 2636 Weight: 1.00 Name: ENSBTAP00000002325/1-562 Len: 596 Check: 4323 Weight: 1.00 Name: bmy_16328T0/1-566 Len: 596 Check: 1458 Weight: 1.00 Name: BACU008332/1-563 Len: 596 Check: 3384 Weight: 1.00 Name: ENSTTRP00000011177/1-444 Len: 596 Check: 6001 Weight: 1.00 // 1 50 ENSP00000467107/1-566 -MAQPEDKAP EVPTEGVRLV PPQVNKADRT PLGVLSTLEP LTRLQRTWGV ENSBTAP00000002325/1-562 MTAQPEDKAS PGPTDQERLI PSQANGAGET PLRVLGTPES LLRLQRTWGV bmy_16328T0/1-566 ---------- --------LI PSQANGAGET PLRVLGTPEP LLRLQRTWGV BACU008332/1-563 -MVQPEDKAS AGPTDGERLI PSQANGAGET PLRVLGTPEP LLRLQRTWGV ENSTTRP00000011177/1-444 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000467107/1-566 WHVPELDTQD AEALVGL--- ---------- -WPLGSFLVT GRDPSQALVL ENSBTAP00000002325/1-562 WQIPELDAHS AKALLDL--- ---------- -WPPGSFLVI GHHPRQVLVL bmy_16328T0/1-566 WQIPELDAQD AKALLELTGE ERVPGKRRLL PLKLSNSFLL ALSPQSRRMV BACU008332/1-563 WQIPELDAQD AKALLEL--- ---------- -WPPGSFLVI GHDPRQVLVL ENSTTRP00000011177/1-444 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000467107/1-566 RSGP---LPG EVNTYQIQKI PRGV-SLESS NLCMPDLPHL LAFLSASRD- ENSBTAP00000002325/1-562 KTGS---SPG EVNTYQIQKL PGGV-CLESS KLCMPDLPHL LAFLSASRD- bmy_16328T0/1-566 LEGPNYRVRG RIR-LGFEKV GGGVWCSTPG PECARDL--- -----GARDQ BACU008332/1-563 RTGP---SPG EINTYQIQKL PGGV-SLESS NLCMSDLPHL LAFLSASRD- ENSTTRP00000011177/1-444 ---------- ---------- ---------- ---MSDLPHL LAFLSASRD- 151 200 ENSP00000467107/1-566 --VLPRTLL- LPPPTLGPRD EHT------- DPVQIGRVQQ DTPGKVLSIV ENSBTAP00000002325/1-562 --ILPRTLL- LPPPTLGPED QNT------- DPLQIGSIQL STSRRVLFLV bmy_16328T0/1-566 ASVLPVTKLD TKSPRLAPWT PGTPHFCWPP DPLRIGSIQL NTSGRVYFAV BACU008332/1-563 --VLPRTLL- LPPPTLGPGD QNT------- GPLQTGSIQL NTSGRVYFAV ENSTTRP00000011177/1-444 --VLPRTLL- LPPPTLGPGD QNT------- DPLQIGSIQL NTSGRVFFVV 201 250 ENSP00000467107/1-566 NQLYLETHRG WGREQTPQET EPEAAQRHDP APRNPAPHGV SWVKGPLSPE ENSBTAP00000002325/1-562 NNLYLETHRG WGMEQTLPET TPETAERHGP APRNPAPHRV SWVEGPLSPE bmy_16328T0/1-566 NKLYLETHRG WEMEQMPPET TPETAERHGP APRNPAPHQV SWVEGPLSPE BACU008332/1-563 NKLYLETHRG WEMEQTPPET TPETADRHGP APRNPAPHQV SWVEGPLSPE ENSTTRP00000011177/1-444 NKLYLETHRG WEMEQTPPET TPETAERHGP APRTPAPHQV SWVEGPLSPE 251 300 ENSP00000467107/1-566 VDHPGPALAS LLEEEEEDLE GKEEGREDDP EEEGPEDVLT IHVQSLVRAR ENSBTAP00000002325/1-562 EHHLRPALAS LVEEKEDEEE --EDDKD--- DEEGPEDMLT QHVRALARAR bmy_16328T0/1-566 VHHPRPALAS PVEEKEEEEK EKDDYKD--- EEEGAEDALT QHIRALARAR BACU008332/1-563 VHHPRPALAS PVEEKEEEEK EKDDYKD--- EEEGAEDALT QHIRALARAR ENSTTRP00000011177/1-444 VHHPRPALAS LVEEKKE--- --DDYKD--- EEEGAEDALT RHIRALARAR 301 350 ENSP00000467107/1-566 SSYVARQYRS LRVRIASDSG GPHGSGDPAT ELLQDVRHLL TDLQDHLAKD ENSBTAP00000002325/1-562 SSYVAKQFRS FRARLTSGAG GPHRPGDPAT ELLQDVRHLL TDLQDHLAKD bmy_16328T0/1-566 SSYVARQFRG FRVRLVSEAE GPHRPGDPAT ELLQDMRHLL ADLQDRLAKD BACU008332/1-563 SSYVARQFRG FRVRLASEAE GPHRPGDPAT ELLQDMRHLL ADLQDRLAKD ENSTTRP00000011177/1-444 SSYVARQFRG FRVRLTSEAE GPHRPGDPAT ELLQDMRHLL ADLQDHLAKD 351 400 ENSP00000467107/1-566 SYIRAVFGSR GPGLPKKDED PGPALETAVC QAVLAPLKPA LWTRLRTLRA ENSBTAP00000002325/1-562 PDVRAVFASR GPGAPQKEEE LGPAVEAALY RAVLAPLKPA LWMRLRTLRA bmy_16328T0/1-566 PDVRAVFESR APGAPQKDED LGPAVEAALC RAVLAPLKPA LWTRLRTLRA BACU008332/1-563 PDVRAVFESR APGAPQKHED LGPAVEAALY RAVLAPLKPA LWTRLRTLRA ENSTTRP00000011177/1-444 PDVRAVFESR APGAPQKDED LGPAVEAALC RAVLAPLKPA LWTRLRTLRA 401 450 ENSP00000467107/1-566 PELRRLRRRQ TALRAGAGPP GAQGPGPEGQ SPAPALRSRI HERLAHLHAA ENSBTAP00000002325/1-562 PELRQLRRRQ VALRAEAGPP GAQGAGREKR SPAPALRSRI HERLAHLHAA bmy_16328T0/1-566 PALRQLRRRQ IALRAEAGPP GAQGAGHERR GPIPALRSRI HARLARLHSA BACU008332/1-563 PALRQLRRRQ IALRAEAGPP GAQGPGHERR GPVPTLRSRI HARLARLHSA ENSTTRP00000011177/1-444 PALRQLRRRQ IALRAEAGPP GAQGAGHERR GPVPALRSRI HARLARLHSA 451 500 ENSP00000467107/1-566 CAPRRKVALL LEVCRDVYAG LARGENQDPL GADAFLPALT EELIWSPDIG ENSBTAP00000002325/1-562 CAPRRKVSLL LAVCSDVYEG LARGENQEPL GADAFLPALT EELIWSPDIG bmy_16328T0/1-566 CAPRRKVSLL LAVCSDVYEG LARDENQEPL GADAFLPALT EELIWSPDIG BACU008332/1-563 CAPRRKVSLL LAVCSDVYEG LARDENREPL GADAFLPALT EELIWSPDIG ENSTTRP00000011177/1-444 CAPRRKASLL LAVCSDVYEG LARDENQEPL GADAFLPALT EELIWSPDIG 501 550 ENSP00000467107/1-566 DTQLDVEFLM ELLDPDELRG EAGYYLTTWF GALHHIAHYQ PETDRAPRGL ENSBTAP00000002325/1-562 ETQLDVEFLM ELLDPDELRG EAGYYLTTWF GALYHIAHYE PDTARAHKGL bmy_16328T0/1-566 ETQLDVEFLM ELLDPDELRG EAGYYLTTWF GALYHIAHYQ PDTGRAPQGL BACU008332/1-563 ETQLDVEFLM ELLDPDELRG EAGYYLTTWF GALYHIAHYQ PDTGRAPQGL ENSTTRP00000011177/1-444 ETQLDVEFLM ELLDPDELRG EAGYYLTTWF GALYHIAHYQ PDTGRAPQGL 551 600 ENSP00000467107/1-566 SSEARASLHQ WHRRRTLHRK DHPRAQANLP FKEPWAEETV TGTSDN ENSBTAP00000002325/1-562 SSEVRASLRQ WHRRRTLHRQ SPSGDQAKLP FEEPWAMEIM QETKDD bmy_16328T0/1-566 SSEARASLRQ WHRRRTLHRQ SPIETQAKLP FEEPWAIEIV QEANDD BACU008332/1-563 SSEARASLRQ WHRRRTLHRQ SPIETQAKLP FEEPWAIEIV QEANDD ENSTTRP00000011177/1-444 SSEARASLRQ WHRRRTLHRQ SPTEAQAKLP FEEPWAIEIV QEASDD