KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:17:18 2014 Check: 00 .. Name: ENSP00000312988/1-356 Len: 382 Check: 8992 Weight: 1.00 Name: ENSTTRP00000011181/1-359 Len: 382 Check: 8722 Weight: 1.00 Name: bmy_16330T0/1-353 Len: 382 Check: 4262 Weight: 1.00 Name: ENSBTAP00000002330/1-357 Len: 382 Check: 6856 Weight: 1.00 // 1 50 ENSP00000312988/1-356 ---------- ---------- --MAGVACLG KAADADEWCD SGLGSLGPDA ENSTTRP00000011181/1-359 RNSRQSPATG GRPLGSPEAL GAMAGVACLG KAADADEWCD SGLGSLGPDA bmy_16330T0/1-353 ---------- ---------- --MAGVACLG KAADADEWCD SGLGSLGPDA ENSBTAP00000002330/1-357 ---------- ---------- --MAGVACLG KAADADEWCD SGLGSLGPDA 51 100 ENSP00000312988/1-356 AAPGGPGLGA ELGPGLSWAP LVFGYVTEDG DTALHLAVIH QHEPFLDFLL ENSTTRP00000011181/1-359 AAPGGPGLGA ELGPGLSWAP LVFGYVTEDG DTALHLAVIH QHEPFLDFLL bmy_16330T0/1-353 AAPGGPGLGS ELGPGLSWAP LVFGYVTEDG DTALHLAVIH QHEPFLDFLL ENSBTAP00000002330/1-357 AAPGGPGLGA ELGPGLSWAP LVFGYVTEDG DTALHLAVIH QHEPFLDFLL 101 150 ENSP00000312988/1-356 GFSAGTEYMD LQNDLGQTAL HLAAILGETS TVEKLYAAGA GLCVAERRGH ENSTTRP00000011181/1-359 GFAAGTEYLY LQNDLGQTAL HLAAILEEAS TVEKLYAAGA SLLVAERGGH bmy_16330T0/1-353 GFAAGTEYLY LQNDLGQTAL HLAAILEEAS TVEKLYAAGA SLLVAERGGH ENSBTAP00000002330/1-357 GFAAGTEYLD LQNDLGQTAL HLAAILEEAS AVEKLYAAGS SLLVAERGGH 151 200 ENSP00000312988/1-356 TALHLACRVG AHACARALLQ PRPRRPREAP DTYLAQGPDR TPDTNHTPVA ENSTTRP00000011181/1-359 TALHLACRVG AHACARVLLQ PRPQCPRGVP NTYLAQGSDH TPDTNHTSVA bmy_16330T0/1-353 TALHLACRVG AHACARVLLQ PRPQCPRGAP NTYLAQGSDH TPDTDHTSVA ENSBTAP00000002330/1-357 TALHLACRVG AHTCARVLLQ PRPQRPRGAP KTYLAQGSDH TPDTDHTPIA 201 250 ENSP00000312988/1-356 LYPDSDLEKE EEESEEDWKL QLEAENYEGH TPLHVAVIHK DVEMVRLLRD ENSTTRP00000011181/1-359 LYPEPDLEKE EDESEEDWKL QLEAENYEGH TPLHVAVIHK DAEMVRLLWE bmy_16330T0/1-353 LYPEPDLGKE EDESEEDWKL QLEAENYEGH TPLHVAVIHK DAEMVRLLWE ENSBTAP00000002330/1-357 LYSEPDVEKE EDESEEDWKL QLEAEDYEGH TPLHVAVIHK DAEMVRLLQE 251 300 ENSP00000312988/1-356 AGADLDKPEP TCGRSPLHLA VEAQAADVLE LLLRAGANPA ARMYGGRTPL ENSTTRP00000011181/1-359 AGADLNKPEP TCGRSPLHLA VEAQAADVLE LLLKAGANPA TRMYGGRTPL bmy_16330T0/1-353 AGADLNKPEP TCGRSPLHLA VEAQAADVLE LLLKAGANPA TCMYGGRTPL ENSBTAP00000002330/1-357 AGADLNKPEP TCGRSPLHLA VEAQAADVLE LLLKAGADPA VRMYGGRTPL 301 350 ENSP00000312988/1-356 GSAMLRPNPI LARLLRAHGA PEPEGEDEKS GPC----SSS SDSDSGDEGD ENSTTRP00000011181/1-359 GSAMLRTNPI LARLLRAHGA PEPEDED-KP GPC----SSS SDSDSGDEGV bmy_16330T0/1-353 GSATLRPNPI LARLLRAHGA PEPEDED-KP GPC----SSS SDSDSGDEGD ENSBTAP00000002330/1-357 GSAMLRPNAI LARLLRAHGA PEPEDED-KP GPCSSSSSSS SDSESGDEGD 351 400 ENSP00000312988/1-356 EYDDIVVHSS RSQTRLPPTP ASKPLPDDPR PV ENSTTRP00000011181/1-359 SQEERL--GG -------PAW GSE------- -- bmy_16330T0/1-353 EYDDIVVHSG RSPNQLPPTP ASKPLPDDPI -- ENSBTAP00000002330/1-357 EYDDIVVHSG RSPNQLPPTP ASKPLPDDPI --