KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:17:18 2014 Check: 00 .. Name: ENSTTRP00000011184/1-518 Len: 534 Check: 706 Weight: 1.00 Name: bmy_16332T0/1-473 Len: 534 Check: 4991 Weight: 1.00 Name: BACU008330/1-528 Len: 534 Check: 5362 Weight: 1.00 Name: ENSBTAP00000002334/1-459 Len: 534 Check: 2849 Weight: 1.00 // 1 50 ENSTTRP00000011184/1-518 MAASIMRRLW PLVAARGLRL RGGCVCNQSP RRSFATERRD RNLLYEHARE bmy_16332T0/1-473 MAASTVRRLW PLVAARSLRL RGGCVCNQSP RRSFATERRD RNLLYEHARE BACU008330/1-528 MAASTVRRLW PLVAARSLRL RGGCVCNQSP RRSFATERRD RNLLYEHARE ENSBTAP00000002334/1-459 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000011184/1-518 GYSALPQLDM EPLCAYPEEA ARALELRKGE LRSEDLPAII STWQELRQQR bmy_16332T0/1-473 GYSALPQLDM EPLCAYPEEA ARTLELRKGE LRSEDLPAI- ---------- BACU008330/1-528 GYSALPQLDM EPLCAYPEEA ARALELRKGE LRSEDLPAII ATWQELRQLR ENSBTAP00000002334/1-459 ---------M ESLCAYPEDA ARALDLRKGE LRSKDLPGII STWQELRQLR 101 150 ENSTTRP00000011184/1-518 EQIRSLEEEK GAVAEAVQAL LVNQDHNQVQ Q--------- -DPQYQSLRA bmy_16332T0/1-473 ---------- ---------- ---------- ---------- -DPQYESLRA BACU008330/1-528 EQIQSLEEEK GAVAEAVRAL LVNQDNNQVQ QVLQGVDILS LDPQYQSLRA ENSBTAP00000002334/1-459 EQIRSLEEEK EAVTEAVRAL VVNQDNSQVQ Q--------- -DPQYQSLRA 151 200 ENSTTRP00000011184/1-518 RGREIRKQLM LLYPKEAQLE EQFYLRALRL PNQTHPDVPV GDESQARVLH bmy_16332T0/1-473 RGREIRKQLM LLYPKEAQLE EQFYLRALRL PNQTHPDVPV GDESQARVLH BACU008330/1-528 RGREIRRQLM LLYPKEAQLE EQFYLRALRL PNQTHPDVPV GDESQARVLR ENSBTAP00000002334/1-459 RGREIRKQLT LLYPKEAQLE EQFYLRALRL PNQTHPDVPV GDESQARVLH 201 250 ENSTTRP00000011184/1-518 VVGDKPAFSF QPRGHLEIAE KLDIIRQKRL SHVSGHRSYY LRGAGALLQH bmy_16332T0/1-473 VVGDKPAFSF QPRGHLEIAE KLDIIRQNVL S--SGLSLGS GGGPGCAPHP BACU008330/1-528 VVGDKPAFSF QPRGHLEIAE KLDIIRQKRL SHVSGHRSYY LRGAGALLQH ENSBTAP00000002334/1-459 VVGDKPAFSF QPRGHLEIAE KLDIIRQKRL SHVSGHRSYY LRGAGALLQH 251 300 ENSTTRP00000011184/1-518 GLVNFTLNKL IHRGFTPMTV PDLLRGAVFE GCGMTPNAKP SQIYNIDPSR bmy_16332T0/1-473 -------SRP PSQGFTPMTV PDLLRGAVFE GCGMTPNAKP SQIYNIDPSR BACU008330/1-528 GLVNFTLNKL VHRGFTPMTV PDLLRGAVFE GCGMTPNAKP SQIYNIDPSR ENSBTAP00000002334/1-459 GLVNFTLNKL IHRGFTPMTV PDLLRGVVFE GCGMTPNAKP SQIYNIDPSR 301 350 ENSTTRP00000011184/1-518 FEDLNLAGTA EVGLAGYFMD HSVAFR---- --DLPIRMVC SSTCYRAETD bmy_16332T0/1-473 FEDLNLAGTA EVGLADLVPT SDIASPLPDP TYPAPPRMVC SSTCYRAETD BACU008330/1-528 FEDLNLAGTA EVGLAGYFMD HSVAFR---- --DLPIRMVC SSTCYRAETD ENSBTAP00000002334/1-459 FEDLNLAGTA EVGLAGYFMD HSVAFR---- --DLPIRMVC SSTCYRAETD 351 400 ENSTTRP00000011184/1-518 TGKEPWGLYR VHHFTKXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_16332T0/1-473 TGKEPWGLYR VHHFTKVEMF GVTGPGLEQS SQLLEEFLSL QMEILTELGL BACU008330/1-528 TGKEPWGLYR VHHFTKVEMF GVTGPGLEQS SQLLEEFLSL QMEILTELGL ENSBTAP00000002334/1-459 TGKEPWGLYR VHHFTKVEMF GVTGPGLEQS SELLEEFLSL QMEILTELGL 401 450 ENSTTRP00000011184/1-518 XXXVLDMPTQ ELGLPAYRKF DIEAWMPGRG RFGEVTSASN CTDFQSRRLH bmy_16332T0/1-473 HFRVLDMPTQ ELGLPAYRKF DIEAWMPGRG RFGEVTSASN CTDFQSRRLH BACU008330/1-528 HFRVLDMPTQ ELGLPAYRKF DIEAWMPGRG RFGEVTSASN CTDFQSRRLH ENSBTAP00000002334/1-459 HFRVLDMPTQ ELGLPAYRKF DIEAWMPGRG RFGEVTSASN CTDFQSRRLH 451 500 ENSTTRP00000011184/1-518 VMVQTEAGEL QFAHTVNATA CAVPRLLIAL LESNQQKDGS VLVPPVLQPY bmy_16332T0/1-473 VMVQTEAGEL QFAHTVNATA CAVPRLLIAL LESNQQKDGS VLVPPVLQPY BACU008330/1-528 VMVQTEAGEL QFAHTVNATA CAVPRLLIAL LESNQQKDGS VLVPPVLQPY ENSBTAP00000002334/1-459 IMFQTEAGEL QFAHTVNATG CAVPRLLIAL LESYQQKDGS VLVPPALQPY 501 550 ENSTTRP00000011184/1-518 LSTDRITTPT HVPLQYIGPN QPQKPRLPGQ PASS bmy_16332T0/1-473 LSTDRITTPT HVPLQYIGPN QPQKPRLPGQ PASS BACU008330/1-528 LSTDRITTPT HVPLQYIGPN QPQKPRLLGQ PASS ENSBTAP00000002334/1-459 LGTDRITTPT HVPLQYIGPN QPQKPRLPGQ PASS