KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:19 2014 Check: 00 .. Name: ENSBTAP00000002341/1-169 Len: 252 Check: 1212 Weight: 1.00 Name: ENSP00000294489/1-238 Len: 252 Check: 2887 Weight: 1.00 Name: ENSTTRP00000001154/1-227 Len: 252 Check: 5235 Weight: 1.00 Name: bmy_12977T0/1-131 Len: 252 Check: 6111 Weight: 1.00 Name: BACU005661/1-142 Len: 252 Check: 770 Weight: 1.00 // 1 50 ENSBTAP00000002341/1-169 ---------- ---------- ---------- ---------- ---------- ENSP00000294489/1-238 MLTPLGKFST AKFAVRLPRV WEARAPSLSG APAPTPPAPP PSRSSRLGLW ENSTTRP00000001154/1-227 MPTLIRKFPT AKFALRLTAG EGTRGPSRAG TSAPRIFQPP VSRSIKRGLW bmy_12977T0/1-131 ---------- ---------- ---------- ---------- ---------- BACU005661/1-142 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000002341/1-169 ---------- ---------- ------MWKV PVLFFILGSA SFWVLAEGAS ENSP00000294489/1-238 PRCFLIFPQL RILLLGPQES NNSTGTMWKV SALLFVLGSA SLWVLAEGAS ENSTTRP00000001154/1-227 --CFIIYPQH RNELLGPART SHK---MWKV ASL--VLGRA SLWV---ADS bmy_12977T0/1-131 ---------- ---------- ---------- ---------- ---------- BACU005661/1-142 ---------- ---------- ---------- ---------- -----MPYTS 101 150 ENSBTAP00000002341/1-169 TVRPEDDV-T TGVTSEKTTL GVEDYTTTPA ASKE-----S LATPMPAGTE ENSP00000294489/1-238 TGQPEDDTET TGLEGGVAMP GAEDDVVTPG TSEDRYKS-G LTTLVATSVN ENSTTRP00000001154/1-227 TVRPEDDV-T TGVENSKATL GMGDHKVTPS AGGEPHKSAG LTALMPTRAK bmy_12977T0/1-131 -------M-T TGVENDKATL RVEDYTVTPG AGGEPHESAG LTALMPTRTK BACU005661/1-142 TVRPEDAM-T TGVEKDKATL RVEDYTVTPG AGGEPHQSAG LTAQMPTRTK 151 200 ENSBTAP00000002341/1-169 NVSHDHREDL PTAEGTTAEG TTAKSTPARS TPARSTTTVL TRVPATSHSQ ENSP00000294489/1-238 SVTGIRIEDL PTSESTVHAQ EQSPSATASN V--------- ----ATSHST ENSTTRP00000001154/1-227 SITEDHKEDR PTAESTAHSQ GQSQSTTTPN V--------- ----ATRPAP bmy_12977T0/1-131 SITDSHKEDL PTAESTIHSQ GQSQSTTTPN V--------- ----ATSQSP BACU005661/1-142 SITDGHKEDL PTAESTTHSQ GQSRSTTAPN V--------- ----ATSQSP 201 250 ENSBTAP00000002341/1-169 GKTDGEKPKS TQKGGLSVGT LVGIIVGVLV GIAVIGGIIS VIVRKM-GRY ENSP00000294489/1-238 EKVDGDTQTT VEKDGLSTVT LVGIIVGVLL AIGFIGAIIV VVMRKMSGRY ENSTTRP00000001154/1-227 GKTDGEKP-T VKKGGLSTMT LTGIIVGVLL AIGFIGGIIT VFVRKMSGRY bmy_12977T0/1-131 GKTDGEKPTT VEKGGLSTVT LVGIIVGVLL AIGFIGGIIT VFVRKMSGRY BACU005661/1-142 GKTDGENPTT VEKGGLSTVS LVGIIVGVLL AIGFIGGIIT VFVRKMSGRY 251 300 ENSBTAP00000002341/1-169 SP ENSP00000294489/1-238 SP ENSTTRP00000001154/1-227 SP bmy_12977T0/1-131 SP BACU005661/1-142 S-