KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:17:20 2014 Check: 00 .. Name: bmy_06937T0/1-377 Len: 384 Check: 8932 Weight: 1.00 Name: ENSBTAP00000002346/1-287 Len: 384 Check: 5895 Weight: 1.00 Name: BACU002587/1-287 Len: 384 Check: 5327 Weight: 1.00 Name: ENSTTRP00000012898/1-287 Len: 384 Check: 5462 Weight: 1.00 // 1 50 bmy_06937T0/1-377 MMTWTRWWLW RWRRGGRARG ITTGSSNKDT VGEMGVTGVR LWARPVPATL ENSBTAP00000002346/1-287 ---------- ---------- ---------- ---------- ---------- BACU002587/1-287 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000012898/1-287 ---------- ---------- ---------- ---------- ---------- 51 100 bmy_06937T0/1-377 SPAAGPGRAM KVLLLAGLGA LFFAYYWDDN FDPGQLRADG PLRARRAGLP ENSBTAP00000002346/1-287 ---------M KVLLLTGLGA LFFAYYWDDN FDPASLHGAR VLLTGVSAGI BACU002587/1-287 ---------M KVLLLAGLGA LFFAYYWDDN FDSASLQGAR VLLTGASVGV ENSTTRP00000012898/1-287 ---------M KVLLLVGLGA LFFAYYWDDN FDPASLQGAR VLLTGASVGI 101 150 bmy_06937T0/1-377 GAEPPRR--R PSRHAGPQRP GDTLAHAGAP PIRSPGSA-- --LPPDSTLS ENSBTAP00000002346/1-287 GEELAYHYAR LGSHLVLTAH TEALLQQVVG NCRKLGAPKV FYIAADMASP BACU002587/1-287 GEELAYHYAR LGSHLVLTAH TEALLQKVVG NCRKLGAPKV FYIAADMASP ENSTTRP00000012898/1-287 GEELAYHYAR LGSHLVLTAH TEALLQKVVG NCRKLGAPKV FYIAADMASP 151 200 bmy_06937T0/1-377 PFPSRTLPLP APNPNFPGSR LRPLDLGSAP GWCSPSSIRN SAPVLEPRPY ENSBTAP00000002346/1-287 EVPERVV--- ----QFALDK LGGLD----- ---------- ---------Y BACU002587/1-287 EVPERVV--- ----QFALDK LGGLD----- ---------- ---------Y ENSTTRP00000012898/1-287 EVPERVV--- ----QFALDK LGGLD----- ---------- ---------Y 201 250 bmy_06937T0/1-377 IPRPRPQALG SAPAPSGLLF LLRPVTRSRH L-QVNFLSYV QLTSLALPSL ENSBTAP00000002346/1-287 LVLNH---LG AAPAGTR--- -VRSSQSTRW LMQMNFLSYV QLTSSALPSL BACU002587/1-287 LVLNH---LG AAPAGTR--- -ARSAQATRW LMQVNFLSYV QLTSLALPSL ENSTTRP00000012898/1-287 LVMNH---LG AAPAGTR--- -GRSAQATRW LMQVNFVSYV QLTSLALQSL 251 300 bmy_06937T0/1-377 TDSKGSLVVV SSLLGRVPTS FSSPYSAAKF ALNSFFGSLR RELDVQDVNV ENSBTAP00000002346/1-287 TDSKGSLVVV SSLLGRVPTS FSSPYSAAKF ALDSFFSSLR RELDVQEVNV BACU002587/1-287 TDSKGSLVVV SSLLGRVPTS FSSPYSAAKF ALNSFFGSLR RELDVQDVHV ENSTTRP00000012898/1-287 TDSKGSLVVV SSLLGRVPTS FSSPYSAAKF ALDSFFGSLR RELDVQDVNV 301 350 bmy_06937T0/1-377 AITMCVLGLR DRASAAEGVR GVTRAKAAPG PKAALAVIRG SATRASGVFY ENSBTAP00000002346/1-287 AITMCVLGLR DRASAAEGVR GITRVRAAPG PKAALAVIRG GATRASGVFY BACU002587/1-287 AITMCVLGLR DRASAAEGVR DVTRAKAAPG PKAALAVIRG SATRASGVFY ENSTTRP00000012898/1-287 AITMCVLGLQ DRASAAEGVR GVTRAKAAPG PKAALAVIRG SATRASGVFY 351 400 bmy_06937T0/1-377 PWRFHLLCLL RGWMPQPRAW FIRQELNITT PAAS ENSBTAP00000002346/1-287 PWRFHLLCLL RSWMPHSRAW FVRQELNITT PAAA BACU002587/1-287 PWRFHLLCLL RGWMPQPRAW FIRQELNITT PAAA ENSTTRP00000012898/1-287 PWRFHLLCLL RGWMPQPRAW FIRQELNITT PAAA