KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:22 2014 Check: 00 .. Name: ENSTTRP00000005489/1-284 Len: 285 Check: 6568 Weight: 1.00 Name: bmy_16283T0/1-193 Len: 285 Check: 1240 Weight: 1.00 Name: BACU002840/1-283 Len: 285 Check: 1958 Weight: 1.00 Name: ENSP00000326022/1-284 Len: 285 Check: 8145 Weight: 1.00 Name: ENSBTAP00000002359/1-284 Len: 285 Check: 5354 Weight: 1.00 // 1 50 ENSTTRP00000005489/1-284 MTTAQFDCQH CTASLLG-KY VLEDHNPHRV TCYDRTSANY CEECKEPIES bmy_16283T0/1-193 MTTAQFDCQY CMASLLG-KY VXKDDNPYCV TCYDRIFSNY CEECKEPIES BACU002840/1-283 MTTAQFDCQH CMASLLG-KY VLKDDNPYCV TCYDRIFSNY CEECKEPIKS ENSP00000326022/1-284 MTTAHFYCQY CTASLLGKKY VLKDDSPYCV TCYDRVFSNY CEECKKPIES ENSBTAP00000002359/1-284 MTTPQFYCQY CMASLLGKKY VLKDDNPYCV SCYDRIFSNY CEECKEPIES 51 100 ENSTTRP00000005489/1-284 DSKDLCYKGH HWHEGCFNYD KCNQSLVEKP SAAKDECLPC SKYYSNECSS bmy_16283T0/1-193 DSKDLCYKGH HWHEGCFNCA KCNQSLAEKP FAAKDECQLC SKYYSNECSS BACU002840/1-283 DSKDLCYKGH HRHEGCFNCA KCNQSLAEKP FAAKDECQLC SEYYSNERSS ENSP00000326022/1-284 DSKDLCYKDR HWHEGCFKCT KCNHSLVEKP FAAKDERLLC TECYSNECSS ENSBTAP00000002359/1-284 GSKDLCYKGH HWHEGCFNCT KCNHSLVEKP FAAKDERLLC SECYSNECSS 101 150 ENSTTRP00000005489/1-284 QCFQCKKTIM PGSRKMKFKG NYWHETCLVC EHCRQPIGAK PLISTESGNY bmy_16283T0/1-193 KCFHCKKTIM PG-------- -------LPA NHLTKQI--- ----KGIWNS BACU002840/1-283 KCFHCKKTIM PGSRKMEFKG NYWHETCFVC KHCQQPIGTK PLISIESGNY ENSP00000326022/1-284 KCFHCKRTIM PGSRKMEFKG NYWHETCFVC ENCRQPIGTK PLISKESGNY ENSBTAP00000002359/1-284 KCFHCKKTIM PGSRKMEFKG NYWHETCFVC EHCRQPIGTK PLISKESGNY 151 200 ENSTTRP00000005489/1-284 CVPCFEMEFA HYCSFFKEAI TSGGIMFCDQ PWHKECFLCS GCRKELCEED bmy_16283T0/1-193 AVPS------ --------VI TSGGIMFCGQ PWHKECFLCR GCRKELCEEE BACU002840/1-283 CVPCFEMEFA HYCSFCKKVI TSGGIMFCGQ PWHKECFLCR GCRKELCEEE ENSP00000326022/1-284 CVPCFEKEFA HYCNFCKKVI TSGGITFCDQ LWHKECFLCS GCRKDLCEEQ ENSBTAP00000002359/1-284 CVPCFEKEFA HYCSFCKKVI TSGGITFRDQ PWHKECFLCS GCRKELCEEE 201 250 ENSTTRP00000005489/1-284 FMSRDDYAFC LDCYNHLYAK KCATCTKPII GLRDTKFICF QDRQWHSECF bmy_16283T0/1-193 FMSRDDYPFC LDCYNHLYAK KCATCTKPIT ---------- ---------- BACU002840/1-283 FMCRDDYPFC LDCYNHLYAK KCATCTKPIT GFRDAKFICF QDRQWHSECF ENSP00000326022/1-284 FMSRDDYPFC VDCYNHLYAN KCVACSKPIS GLTGAKFICF QDSQWHSECF ENSBTAP00000002359/1-284 FMSRDDYPFC LDCYNHLYAK KCAACTKPIT GLRGAKFICF QDRQWHSECF 251 300 ENSTTRP00000005489/1-284 NCGKCSVSLV GKGFLTHNKE IFCHQCGSGV DTDMK bmy_16283T0/1-193 ---------- ---------- ---------- ----- BACU002840/1-283 NCEKCSVSLV GEGFLTHNKE IFCHKCGSEV DTDM- ENSP00000326022/1-284 NCGKCSVSLV GKGFLTQNKE IFCQKCGSGM DTDI- ENSBTAP00000002359/1-284 NCGKCSVSLV GEGFLTHNKE IFCRKCGSGV DTDI-