KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:32 2014 Check: 00 .. Name: ENSTTRP00000007232/1-342 Len: 598 Check: 1658 Weight: 1.00 Name: ENSP00000162044/1-479 Len: 598 Check: 4673 Weight: 1.00 Name: bmy_02650T0/1-583 Len: 598 Check: 678 Weight: 1.00 Name: BACU016637/1-477 Len: 598 Check: 5025 Weight: 1.00 Name: ENSBTAP00000002376/1-493 Len: 598 Check: 7380 Weight: 1.00 // 1 50 ENSTTRP00000007232/1-342 ---------- ---------- ---------- ---------- ---------- ENSP00000162044/1-479 ---------- ---------- ---------- ---------- ---------- bmy_02650T0/1-583 MRGTXCPPDL PPGSKPDDWL DGLLVRPNSG FDWSSSKLCS ELQAHGSRHS BACU016637/1-477 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002376/1-493 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000007232/1-342 -----MAVLG VQLVVTLLTA TLMHRLAPHC SFARWLLCNG SLFRYKHPSE ENSP00000162044/1-479 -----MAVLG VQLVVTLLTA TLMHRLAPHC SFARWLLCNG SLFRYKHPSE bmy_02650T0/1-583 APAGNMAVLG VQLVVTLLTA TLMHRLAPHC SFARWLLCNG SLFRYKHPSE BACU016637/1-477 -------VLG VQLVVTLLTA TLMHRLAPHC SFARWLLCNG SLFRYKHPSE ENSBTAP00000002376/1-493 -----MAVLG VQLVVTLLTA TLMHRLAPHC SFARWLLCNG SLFRYKHPTE 101 150 ENSTTRP00000007232/1-342 EELRALAGKQ RPRGRKERXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000162044/1-479 EELRALAGKP RPRGRKERWA NGLSEEKPLS VPRDAPFQLE TCPLTTVDAL bmy_02650T0/1-583 EELRALAGKQ RPRGRKERWA NGYSEEKPLS VPRDTPFQLE TCPLTAVDAL BACU016637/1-477 EELRALAGKQ RPRGRKERWA NGYSEEKPLS VPRDTPFQLE TCPLTAVDAL ENSBTAP00000002376/1-493 EELRALAGKQ KPRGRKERWA NGCSEEKPLS VPRDAPFQLQ TCPLTAVDAL 151 200 ENSTTRP00000007232/1-342 XXXXXXXXQW FVDFAVYSGG VYL-TEDY-Y VLGPAKETNI AVFWCLLTIA ENSP00000162044/1-479 VLRFFLEYQW FVDFAVYSGG VYLFTEAYYY MLGPAKETNI AVFWCLLTVT bmy_02650T0/1-583 VLRFFLKYQW FVDFAVYSGG VYLFTEAYYY VLGPAKETNI AVFWCLLTIA BACU016637/1-477 VLRFFLEYQW FVDFAVYSGG VYLFTEAYYY VLGPAKETNI AVFWCLLTIA ENSBTAP00000002376/1-493 VLRFFLEYQW FVDFAVYSGG VYLFTEAYYY MLGPAKETNI AVFWCLLTIA 201 250 ENSTTRP00000007232/1-342 FSIKVFLTVT RLYFSAEEGG ERSVCLTFAF LFLLLAMLVQ VVPEETLELG ENSP00000162044/1-479 FSIKMFLTVT RLYFSAEEGG ERSVCLTFAF LFLLLAMLVQ VVREETLELG bmy_02650T0/1-583 FSIKVFLTVT RLYFSAEEGG ERSVCLTFAF LFLLLAMLVQ VVPEETLELG BACU016637/1-477 FSIKVFLTVT RLYFSAEEGG ERSVCLTFAF LFLLLAMLVQ VVPEETLELG ENSBTAP00000002376/1-493 FSVKVFLTVT RLYFSAEEGG ERSVCLTFAF LFLLLAMLVQ VVREETLELG 251 300 ENSTTRP00000007232/1-342 LEPG------ ---------L ASMTQNLEPL LKTQGWDWAL PLVKLAIRVG ENSP00000162044/1-479 LEPG------ ---------L ASMTQNLEPL LKKQGWDWAL PVAKLAIRVG bmy_02650T0/1-583 LEPG------ ---------L ASMTQNLEPL LKTQGWDWAL PLVKLAIRVG BACU016637/1-477 LEPG------ ---------L ASMTQNLEPL LKTQGWDWAL PLVKLAIRVG ENSBTAP00000002376/1-493 LEPGACVRGL GRHRITSSCL DSMSQNLEPL LKMQGWDWAL PLVKLAIRVG 301 350 ENSTTRP00000007232/1-342 LAAVGSMLGA FLTFPGLRLA QTHHDALTMS EDRPMLQF-- ---------- ENSP00000162044/1-479 LAVVGSVLGA FLTFPGLRLA QTHRDALTMS EDRPMLQF-- ---------- bmy_02650T0/1-583 LAAVGSMLGA FLTFPGLRLA QTHHDALTMS EDRPMLQLRG GPGGWRVRAP BACU016637/1-477 LAAVGSMLGA FLTFPGLRLA QTHHDALTMS EDRPMLQF-- ---------- ENSBTAP00000002376/1-493 LAVVGSMLGA FLTFPGLRLA QTHHDALTMS EDRPMLQF-- ---------- 351 400 ENSTTRP00000007232/1-342 ---------- ---------- ---LLHTSFL SPLFVL---- ---------- ENSP00000162044/1-479 ---------- ---------- ---LLHTSFL SPLFIL---- ---------- bmy_02650T0/1-583 RGGAGGDGGC PSLPALRPCP QVPSAHQLPV PPVCPVALDQ AHGAGLPAPG BACU016637/1-477 ---------- ---------- ---LLHTSFL SPLFVL---- ---------- ENSBTAP00000002376/1-493 ---------- ---------- ---LLHTSFL SPLFVL---- ---------- 401 450 ENSTTRP00000007232/1-342 WLWTKPMARD FLHQAPFGST SSSLLSDSAF DSLRLWMLVA LCLLRLAVTR ENSP00000162044/1-479 WLWTKPIARD FLHQPPFGET RFSLLSDSAF DSGRLWLLVV LCLLRLAVTR bmy_02650T0/1-583 SLWEHVLFSV RMEVGGRAAG APSGLSDSAF DSLRLWMLVA LCLLRLAVTR BACU016637/1-477 WLWTKPMARD FLHQAPFGST SFSLLSDSAF DSLRLWMLVA LCLLRLAVTR ENSBTAP00000002376/1-493 WLWTKPMARD FLHQAPLGRM SFSLLSDSAF DSLRLWVLVV LCLLRLAVTR 451 500 ENSTTRP00000007232/1-342 PHLQAYLCLA KAR------- ---------- ---------- ---------- ENSP00000162044/1-479 PHLQAYLCLA KARVEQLRRE AGRIEAREIQ QRVVRVYCYV TVVSLQYLTP bmy_02650T0/1-583 PHLQAYLCLA KARVEQLRRE AGRIEAREIQ RRVVRVYCYV TVVSLQYLSP BACU016637/1-477 PHLQAYLCLA KARVEQLRRE AGRIEAREIQ RRVVRVYCYV TVVSLQYLSP ENSBTAP00000002376/1-493 PHLQAYLCLA KARVEQLRRE AGRIEAREIQ RRVVRVYCYV TVVSLQYLTP 501 550 ENSTTRP00000007232/1-342 ---------- ---------- ---------- ---------- ---------- ENSP00000162044/1-479 LILTLNCTLL LKTLGGYSWG LGPAPLLSPD PSSASAAPIG SGEDEVQQTA bmy_02650T0/1-583 LILTLNCTLL LKTLGGYSWG LGPVPPLSPT PSSARDGPVG REEDEAQQTV BACU016637/1-477 LILTLNCTLL LKTLGGYSWG LGPVPPLSPT PSSARDGPVG PEEDEAQQTV ENSBTAP00000002376/1-493 LILTLNCTLL LKTLGGYSWG LGPVPTLSPT PPSAHDGPVG PEEDEAQQTA 551 600 ENSTTRP00000007232/1-342 ---------- ---------- ---------- ---------- -------- ENSP00000162044/1-479 ARIAGALGGL LTPLFLRGVL AYLIWWTAAC QLLASLFGLY FHQHLAGS bmy_02650T0/1-583 ALIAGVLGSL LTPLFLRGVL AFLIWWIATC QLLSSLFGLY FHQHLAGS BACU016637/1-477 ALIAGVLGSL LTPLFLRGVL AFLIWWIATC QLLSSLFGLY FHQHLAGS ENSBTAP00000002376/1-493 ALIAGALGSL LTPLFLRGVL AFLIWWIAAC QLLSSLFGLY FHQHLAG-