KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:17:36 2014 Check: 00 .. Name: ENSTTRP00000014163/1-519 Len: 523 Check: 4093 Weight: 1.00 Name: ENSP00000323511/1-521 Len: 523 Check: 4721 Weight: 1.00 Name: bmy_06361T0/1-454 Len: 523 Check: 8923 Weight: 1.00 Name: ENSBTAP00000002397/1-522 Len: 523 Check: 6253 Weight: 1.00 // 1 50 ENSTTRP00000014163/1-519 MARVEAQGRL WLESPPGGAP PIFLPLGGQA LVLGRGPLTQ VTDRKCSRNQ ENSP00000323511/1-521 MGEVEAPGRL WLESPPGGAP PIFLPSDGQA LVLGRGPLTQ VTDRKCSRTQ bmy_06361T0/1-454 MAKVEAQGRL WLESPPGGAP PIFLPLGGQA LVLGRGPLTQ VTDRKCSRNQ ENSBTAP00000002397/1-522 MARVETQGRL WLESPAGGAP PIFLPTGGQA LVLGRGPLTQ VTDRKCSRNQ 51 100 ENSTTRP00000014163/1-519 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000323511/1-521 VELVADPETR TVAVKQLGVN PSTTGTQELK PGLEGSLGVG DTLYLVNGLH bmy_06361T0/1-454 VELVADPETR TVAVKQLGVN PSTAGTQELR TGLEGSLGVG DTLYLVNGLH ENSBTAP00000002397/1-522 VELVADPETR TVAVKQLGVN PSTAGTQELR PGLKGALGVG DTLYLVNGLH 101 150 ENSTTRP00000014163/1-519 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXX--XXXXX XXXXXXXXXX ENSP00000323511/1-521 PLTLRWEETR TPESQPDTPP GTPLVSQDEK RDA--ELPKK RMRKSNPGWE bmy_06361T0/1-454 PLTLRWEEAR TPESQPDTPP GTPPVAPEEE EEEEDEQQKK RIRKSSPGWE ENSBTAP00000002397/1-522 PLTLRWEEAL TPESQPDTPP STPPVTREGE EENV-EQQKK RIRKSSPGWE 151 200 ENSTTRP00000014163/1-519 XXXXXXXXXX XXXXXXXXVA SFDLDGTLIT TRSGKVFPTG PSDWRILYRE ENSP00000323511/1-521 NLEKLLVFTA AGVKPQGKVA GFDLDGTLIT TRSGKVFPTG PSDWRILYPE bmy_06361T0/1-454 SFQKLLVFTA PGVKPRG--- ---------- ---------- ---------- ENSBTAP00000002397/1-522 TFEKLLVFTA PGVKARGKVA GFDLDGTLIT TRSGKVFPTG PSDWRILYLE 201 250 ENSTTRP00000014163/1-519 IPQKLRELAA EGYKLVIFTN QMGIGRGKLP AELFKAK-EA VVEKLGVPFQ ENSP00000323511/1-521 IPRKLRELEA EGYKLVIFTN QMSIGRGKLP AEEFKAKVEA VVEKLGVPFQ bmy_06361T0/1-454 ---------- ---KLVIFTN QMGIGRGKLP AEEFKAKVEA VVEKLGVPFQ ENSBTAP00000002397/1-522 IPRKLRELAA KGYKLVIFTN QMGIGRGKLR AEEFKAKVEA VVEKLGVPFQ 251 300 ENSTTRP00000014163/1-519 VLVATHAGLY RKPVIGMWDH LQGQANEGVP ISIGDSVFVG DAAGRPANWA ENSP00000323511/1-521 VLVATHAGLY RKPVTGMWDH LQEQANDGTP ISIGDSIFVG DAAGRPANWA bmy_06361T0/1-454 VLVATHAGLY RKPVIGMWDH LQEQANEGVP ISIGDSVFVG DAAGRPANWA ENSBTAP00000002397/1-522 VLVATHAGLY RKPVSGMWDH LQEQANEGVP ISIGDSVFVG DAAGRPANWA 301 350 ENSTTRP00000014163/1-519 PGRKKKDFSC ADRLFALNLG LPFATPEEFF LKWPMARFEL PAFDPRTVSC ENSP00000323511/1-521 PGRKKKDFSC ADRLFALNLG LPFATPEEFF LKWPAAGFEL PAFDPRTVSR bmy_06361T0/1-454 PGRKKKDFSC ADRLFALNLG LPFATPEEFF LKWPMARFEL PAFDP-APTN ENSBTAP00000002397/1-522 PGRKKKDFSC ADRLFALNVG LPFTTPEEFF LKWPATRFEL PAFDPRSVAR 351 400 ENSTTRP00000014163/1-519 SGPLCLPESS SLLSSDPEVV VAVG-PGAGK STFLQEHLVS AGYVHVNTXX ENSP00000323511/1-521 SGPLCLPESR ALLSASPEVV VAVGFPGAGK STFLKKHLVS AGYVHVNRDT bmy_06361T0/1-454 AAPFT----- ---------- -------AGK STFLQEHLVS AGYVHVNRDT ENSBTAP00000002397/1-522 CGPLCLPESS SLLSSDPEVV VAVGFPGAGK STFLREHLVS AGYVHVNRDT 401 450 ENSTTRP00000014163/1-519 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000323511/1-521 LGSWQRCVTT CETALKQGKR VAIDNTNPDA ASRARYVQCA RAAGVPCRCF bmy_06361T0/1-454 LGSWQRCVTM CEAALKQRKR VMIDNTNPDV QSRARYIKCA RDAGVPCRCF ENSBTAP00000002397/1-522 LGSWQRCVTA CEAALKQRKP VVIDNTNPDV QSRARYIKCA RDAGVPCRCF 451 500 ENSTTRP00000014163/1-519 XXXXXXEQAR HNTRFRDMTD SSHIPVTDIV IYGYRKQLEA PTLAEGFSAI ENSP00000323511/1-521 LFTATLEQAR HNNRFREMTD SSHIPVSDMV MYGYRKQFEA PTLAEGFSAI bmy_06361T0/1-454 LFSATLEQAR HNNRFRDMTD SSHIPVTDVV IYGYRKQLEA PTLAEGFTAI ENSBTAP00000002397/1-522 LFSATVEQAR HNNRFREMTD SSHVPVSDIV IYGYRKQFEA PTLAEGFAAV 501 550 ENSTTRP00000014163/1-519 LEIPFRIHVA PQLERLYRQF SEG ENSP00000323511/1-521 LEIPFRLWVE PRLGRLYCQF SEG bmy_06361T0/1-454 LEIPFRLHVA PQLERLYRQF SEG ENSBTAP00000002397/1-522 LEIPFRLHVA PQLERLYRQF SEG