KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:38 2014 Check: 00 .. Name: ENSP00000233616/1-837 Len: 924 Check: 938 Weight: 1.00 Name: ENSBTAP00000002408/1-721 Len: 924 Check: 4815 Weight: 1.00 Name: BACU010576/1-924 Len: 924 Check: 3228 Weight: 1.00 Name: bmy_12425T0/1-839 Len: 924 Check: 723 Weight: 1.00 Name: ENSTTRP00000012065/1-839 Len: 924 Check: 763 Weight: 1.00 // 1 50 ENSP00000233616/1-837 ---------- MARGERRRRA VP----AEGV RTAERAARGG PGRRD----- ENSBTAP00000002408/1-721 ---------- ---------- ---------- ---------- ---------- BACU010576/1-924 MAAALARLGL RSVKEVRVQF CPFEKNVEST RTFLQAVSSE KVRCTNLNCS bmy_12425T0/1-839 ---------- MARGERRRRG AP----ADGA RTAERAARGG PARRE----- ENSTTRP00000012065/1-839 ---------- MARGERRRRG AP----ADGA RTAERAARGG PARRE----- 51 100 ENSP00000233616/1-837 ---------- --------GR GGG--PRST- ---------- ----AGGVAL ENSBTAP00000002408/1-721 ---------- ---------- ---------- ---------- ---------- BACU010576/1-924 VIADVRHDGS EPCVDVLFGD GHRLIMRGAH LTAQEMLSAF ASHIQARAAL bmy_12425T0/1-839 ---------- --------GR GGR--ARGA- ---------- ----AAGAAL ENSTTRP00000012065/1-839 ---------- --------GR GGR--PRGA- ---------- ----AAGAAL 101 150 ENSP00000233616/1-837 AVVVLSLALG MSGRWVLAWY RARRAVTLHS APPVLPADSS SPAVAPDLFW ENSBTAP00000002408/1-721 ---------- ---------- ---------- ---------- ---------- BACU010576/1-924 AVVVLSLALG LSGCWLLAWH RARRAVTLHS APPALPPDSS SPAVAPDLFW bmy_12425T0/1-839 AVVVLSLALG LSGCWLLAWH RARRAVTLHS APPALPPDSS SPAVAPDLFW ENSTTRP00000012065/1-839 AVVILSLALG LSGCWLLAWH RARRAVTLHS APPALPPDSS SPAVAPDLFW 151 200 ENSP00000233616/1-837 GTYRPHVYFG MKTRSPKPLL TGLMWAQQGT TPGTPKLRHT CEQGDGVGPY ENSBTAP00000002408/1-721 ---------- ---------- --LMWAQQGT TPGTPKLRHT CEQGDGVGPY BACU010576/1-924 GTYRPHVYFG MKTRSPQPLL TGLMWAQQGT TPGTPKLRHT CEQGDGVGPY bmy_12425T0/1-839 GTYRPHVYFG MKTRSPQPLL TGLMWAQQGT TPGTPKLRHT CEQGDGVGPY ENSTTRP00000012065/1-839 GTYRPHVYFG MKTRSPQPLL TGLMWAQQGT TPGTPKLRHT CEQGDGVGPY 201 250 ENSP00000233616/1-837 GWEFHDGLSF GRQHIQDGAL RLTTEFVKRP GGQHGGDWSW RVTVEPQDSG ENSBTAP00000002408/1-721 GWEFHDGVSF GRQHIQDGAL RLTTEFVKRP GGQHGGDWSW RVTVEPQASG BACU010576/1-924 GWEFHDGLSF GRQHIQDGAL RLTTEFVKRP GGQHGGNWSW RVTVEPQASS bmy_12425T0/1-839 GWEFHDGLSF GRQHIQDGAL RLTTEFVKRP GGQHGGNWSW RVTVEPQASS ENSTTRP00000012065/1-839 GWEFHDGLSF GRQHIQDGAL RLTTEFVKRP GGQHGGNWSW RVTVEPQASG 251 300 ENSP00000233616/1-837 TSALPLVSLF FYVVTDGKEV LLPEVGAKGQ LKFISGHTSE LGDFRFTLLP ENSBTAP00000002408/1-721 TSALPLVSLF FYVVTDGKEV LVPEVGAKGQ LKFISGHTSE LGDFRFTLLA BACU010576/1-924 TSALPLVSLF FYVVTDGKEV LVPEVGAKGQ LKFISGHTSE LGDFRFTLMP bmy_12425T0/1-839 TSALPLVSLF FYVVTDGKEV LVPEVGAKGQ LKFISGHTSE LGDFRFTLMP ENSTTRP00000012065/1-839 TSALPLVSLF FYVVTDGKEV LVPEVGAKGQ LKFISGHTSE LGDFRFTLMP 301 350 ENSP00000233616/1-837 PTSPGDTAPK YGSYNVFWTS NPGLPLLTEM VKSRLNSWFQ HRPPGAPPER ENSBTAP00000002408/1-721 PTSPGDTTPK YGSYNVFWSS NPGLPLLTEM VKSRLNNWFQ HRPPGASPER BACU010576/1-924 PTSPGDTAPK YGSYNVFWSS NPGLPSLTEM VKSRLNNWFQ HRPPGASPER bmy_12425T0/1-839 PTSPGDTAPK YGSYNVFWSS NPGLPLLTEM VKSRLNNWFQ HRPPGASPER ENSTTRP00000012065/1-839 PTSPGDTAPK YGSYNVFWSS NPGLPLLTEM VKSRLNNWFQ HRPPGASPER 351 400 ENSP00000233616/1-837 YLGLPGSLKW EDRGPSGQGQ --GQFLIQQV TLKIPISIEF VFESGSAQAG ENSBTAP00000002408/1-721 YLGLPGSLKW DDRGPSGQGQ GQGQFLIQQV TLKVPCSVEL VFESGSARTG BACU010576/1-924 YLGLPGSLKW EDRGPSGQGQ GQGQFLIQQV TLKVPFSVEL VFESGSAQAG bmy_12425T0/1-839 YLGLPGSLKW EDRGPSGQGQ GQGQFLIQQV TLKVPFSVEL VFESGSAQAG ENSTTRP00000012065/1-839 YLGLPGSLKW EDRGPSGQGQ GQGQFLIQQV TLKVPFSVEL VFESGSAQAG 401 450 ENSP00000233616/1-837 GNQALPRLAG SLLTQALESH AEGFRERFEK TFQLKEKGLS SGEQVLGQAA ENSBTAP00000002408/1-721 GSQALEQLAG SLLTHALESH AEAFRERFEK TFRLKEKGLS PEEQALGQGA BACU010576/1-924 ESQALEQLAG SLLTQALESH AEAFRERFEK TFRLKEKGLS PEEQALGQVA bmy_12425T0/1-839 GSQALEQLAG SLLTQALESH AEAFRERFEK TFRLKEKGLS PEEQALGQVA ENSTTRP00000012065/1-839 GSQALEQLAG SLLTQALESH AEAFRERFEK TFRLKEKGLS PEEQALGQVA 451 500 ENSP00000233616/1-837 LSGLLGGIGY FYGQGLVLPD IGVEGSEQKV DPALFPPVPL FTAVPSRSFF ENSBTAP00000002408/1-721 LSGLLGGIGY FYGQGLVLPD MEVEGSEQKV DPVLFPSVPL FTAVPSRSFF BACU010576/1-924 LSGLLGGIGY FYGQGLVLPN MEVEASKQKV DPVLFPPVPL FTAVPSRSFF bmy_12425T0/1-839 LSGLLGGIGY FYGQGLVLPD MEVEGSKQKV DPVLFPPVPL FTAVPSRSFF ENSTTRP00000012065/1-839 LSGLLGGIGY FYGQGLVLPD MEVEGSKQKV DPVLFPPVPL FTAVPSRSFF 501 550 ENSP00000233616/1-837 PRGFLWDEGF HQLVVQRWDP SLTREALGHW LGLLNADGWI GREQILGDEA ENSBTAP00000002408/1-721 PRGFLWDEGF HQLVIQRWDP RLTREAIGHW LGLLNANGWI GREQVLGDEA BACU010576/1-924 PRGFLWDEGF HQLVIQRWDP RLTREAVGHW LGLLNADGWI GREQVLGDEA bmy_12425T0/1-839 PRGFLWDEGF HQLVIQRWNP RLTREAVGHW LGLLNADGWI GREQVLGDEA ENSTTRP00000012065/1-839 PRGFLWDEGF HQLVIQRWDP QLTREAIGHW LGLLNADGWI GREQVLGDEA 551 600 ENSP00000233616/1-837 RARVPPEFLV QRAVHANPPT LLLPVAHMLE VGDPDDLAFL RKALPRLHAW ENSBTAP00000002408/1-721 RARVPSEFLV QRTAHANPPT LLLPVAHMLD GGDPADLAFL RRAFPRLRAW BACU010576/1-924 RARVPSEFLV QRTAHANPPT LLLPVAHMLE GGDPADYAFL RRAFPRLRAW bmy_12425T0/1-839 RARVPSEFLV QRTAHANPPT LLLPVAHMLE GGDPADYAFL RRAFPRLRAW ENSTTRP00000012065/1-839 RARVPSEFLV QRTAHANPPT LLLPIAHMLE GGDPADYAFL HRAFPRLRAW 601 650 ENSP00000233616/1-837 FSWLHQSQAG PLPLSYRWRG RDPALPTLLN PKTLPSGLDD YPRASHPSVT ENSBTAP00000002408/1-721 FSWLHHSQAG PVPLSYRWRG RDPALPTLLN PKTLPSGLDD YPRASHPSAS BACU010576/1-924 FFWLHQSQAG PVPLSYRWRG RDPALPTLLN PKTLPSGLDD YPRASHPSPT bmy_12425T0/1-839 FSWLHQSQAG PVPLSYRWRG RDPALPTLLN PKTLPSGLDD YPRASHPSPT ENSTTRP00000012065/1-839 FSWLHQSQAG PVPLSYRWRG RDPALPTLLN PKTLPSGLDD YPRASHPSST 651 700 ENSP00000233616/1-837 ERHLDLRCWV ALGARVLTRL AEHLGEAEVA AELGPLAASL EAAESLDELH ENSBTAP00000002408/1-721 ERHLDLRCWV ALGSRVLMRL AEQLGEAEAA AELGPLAASL GAEESLDELH BACU010576/1-924 ERHLDLRCWV ALGARVLMQL AEQLGEAEAA AELGPLAASL EAEESLDELH bmy_12425T0/1-839 ERHLDLRCWV ALGARVLMQL AEQLGEAEAA AELGPLAASL EAEESLDELH ENSTTRP00000012065/1-839 ERHLDLRCWV ALGARVLMRL AERLGEAEAA AELGPLAASL EAEESLDELH 701 750 ENSP00000233616/1-837 WAPELGVFAD FGNHTKAVQL KPRPPQGLVR VVGRPQPQLQ YVDALGYVSL ENSBTAP00000002408/1-721 WAPELGVFAD FGNHTKAVQL KPRPPQGLMR VVGRPHPHLQ YVDALGYVSL BACU010576/1-924 WAPELGVFAD FGNHTKAVQL KPRPPQGLVR VVGQPSPRLQ YVDALGYVSL bmy_12425T0/1-839 WAPELGVFAD FGNHTKAVQL KPRPPQGLVR VVGRPSPRLQ YVDALGYVSL ENSTTRP00000012065/1-839 WAPELGVFAD FGNHTKAVQL KPRPPQGLVR VVGRPNPRLQ YVDALGYVSL 751 800 ENSP00000233616/1-837 FPL------- ---------- ---------- ----LLRLLD PTSSRLGPLL ENSBTAP00000002408/1-721 FPF------- ---------- ---------- ----LLRLLD PNSPRLGPML BACU010576/1-924 FPFLLXXXXX XXXXXXXXXX XXXXXXXXXX XXXXLLRLLD PNSSRLGPLL bmy_12425T0/1-839 FPF------- ---------- ---------- ----LLRLLD PNSSRLGPLL ENSTTRP00000012065/1-839 FPF------- ---------- ---------- ----LLRLLD PNSSRLGPLL 801 850 ENSP00000233616/1-837 DILADSRHLW SPFGLRSLAA SSSFYGQRNS EHDPPYWRGA VWLNVNYLAL ENSBTAP00000002408/1-721 DVLADRRQLW SPFGLRSLAA SSPFYSQRNS EHDPPYWRGA VWLNVNYLAL BACU010576/1-924 DVLADSRQLW SPFGLRSLAA TSPFYSQRNS EHDPPYWRGA VWLNVNYLAL bmy_12425T0/1-839 DVLADSRQLW SPFGLRSLAA TSPFYSQRNS EHDPPYWRGA VWLNVNYLAL ENSTTRP00000012065/1-839 DVVADSRQLW SPFGLRSLAA TSPFYSQRNS EHDPPYWRGA VWLNVNYLAL 851 900 ENSP00000233616/1-837 GALHHYGHLE GPHQARAAKL HGELRANVVG NVWRQYQATG FLWEQYSDRD ENSBTAP00000002408/1-721 GALHYYGHLE GPHQARAARL HGELRANLVG NVRRQYQATG FLWEQYSDQD BACU010576/1-924 GALHYYGHLE GPYQARAAKL HRELRTNLVG NVRRQYQATG FLWEQYSDQD bmy_12425T0/1-839 GALHYYGHLE GPYQARAAKL HRELRTNLVG NVRRQYQATG FLWEQYSDQD ENSTTRP00000012065/1-839 GALHYYGHLK GPYQARAAKL HRELRTNLVS NVRRQYQATG FLWEQYSDQD 901 950 ENSP00000233616/1-837 GRGMGCRPFH GWTSLVLLAM AEDY ENSBTAP00000002408/1-721 GRGMGCRPFQ GWTSLVLLAM AEDY BACU010576/1-924 GRGMGCRPFQ GWTSLVLLAM AEDY bmy_12425T0/1-839 GRGKGCRPFQ GWTSLVLLAM AEDY ENSTTRP00000012065/1-839 GRGMGCRPFQ GWTSLVLLAM AEDY