KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:38 2014 Check: 00 .. Name: ENSP00000377914/1-312 Len: 372 Check: 1390 Weight: 1.00 Name: ENSBTAP00000002418/1-310 Len: 372 Check: 7278 Weight: 1.00 Name: ENSTTRP00000009540/1-355 Len: 372 Check: 8219 Weight: 1.00 Name: bmy_12171T0/1-311 Len: 372 Check: 9978 Weight: 1.00 Name: BACU001836/1-310 Len: 372 Check: 8625 Weight: 1.00 // 1 50 ENSP00000377914/1-312 MADFGISAGQ FVAVVWDKSS PVEALKGLVD KLQALTGNEG RVSVENIKQL ENSBTAP00000002418/1-310 MADFGISAGQ FVAVIWDKSS PVEALKDLVD KLQALTGDEG RVSVENINQL ENSTTRP00000009540/1-355 MADFGISAGQ FV-VVWDKSS PMEALKDLVD KLQALTGDEG RVSVENINQL bmy_12171T0/1-311 MADFGISAGQ FVAVVWDKSS PMEALKDLVD KLQALTGDEG RVSVENINQL BACU001836/1-310 MADFGISAGQ FVAVVWDKSS PMEALKDLVD KLRALTGDEG RVSVENINQL 51 100 ENSP00000377914/1-312 LQSAHKESSF DIILSGLVPG STTLHSAEIL AEIARILRPG GCLFLKEPVE ENSBTAP00000002418/1-310 LQSAHKESSF DIVLSGIIPG STTLHSADIL AEMARILRPG GCLFLKEPVE ENSTTRP00000009540/1-355 LQC------- ------IIPG STTLHSAEIL AEMARILRPS GCLFLKEPVE bmy_12171T0/1-311 LQSAHKESSF DIILSGIIPG STTLHSAEIL AEMARILRPS GCLFLKEPVE BACU001836/1-310 LQSAHKESSF DIILSGIIPG STTLHSAEIL AEMARILRPS GCLFLKEPVE 101 150 ENSP00000377914/1-312 TAV-DNNSKV KTASKLCSAL TLSGLVEVKE LQREPLTPEE VQSVREHLGH ENSBTAP00000002418/1-310 TAV-VNNSKV KTASKLCSAL TLSGLVEVKE LQRESLSPEE IQSVREHLGY ENSTTRP00000009540/1-355 TAV-VNNSKV KTASKLCSAL TLSGLVEVKE LQRKFLSPEE IQSVREHLGY bmy_12171T0/1-311 TAVAVNNSKV KTASKLCSAL TLSGLVEVKE LQRKFLSPEE IQSVREHLGY BACU001836/1-310 TAV-VNNSKV KTASKLCSAL TLSGLVEVKE LQRKFLSPEE IQSVREHLGY 151 200 ENSP00000377914/1-312 ESDNLLFVQI TGKKPNFEVG SSRQLKLSIT KKSSPSVKPA VDPAAAKLWT ENSBTAP00000002418/1-310 HSDSLLSLQI TGKKPNFEVG SSSQLKLSIA KKSSG--KPA VDPAAAKLWT ENSTTRP00000009540/1-355 HSDSLLSVQI TGKKPNFEVG SSSQLKLSTT KKSSG--KPA MDPAAAKLWT bmy_12171T0/1-311 HSDSLLSVQI TGKKPDFEVG SSSQLKLSTT KKSSG--KPA VDPAAAKLWT BACU001836/1-310 HSDSLLSVQI TGKKPDFEVG SSSQLKLSTT KKSSG--KPA VDPAAAKLWT 201 250 ENSP00000377914/1-312 LSANDMEDDS M--------- ---------- ---------- ---------- ENSBTAP00000002418/1-310 LSANDMEDES V--------- ---------- ---------- ---------- ENSTTRP00000009540/1-355 LSANDMEDES VHSFCARSVH CVVSLGVMIK PGDLGAFYID GRTAAVDCGH bmy_12171T0/1-311 LSANDMEDES V--------- ---------- ---------- ---------- BACU001836/1-310 LSANDMEDES V--------- ---------- ---------- ---------- 251 300 ENSP00000377914/1-312 ---------- ---------- DLIDSDELLD PEDLKKPDPA SLRAASCGEG ENSBTAP00000002418/1-310 ---------- ---------- DLIDSDELLD AEDLKKPDPA SLRAPSCGEG ENSTTRP00000009540/1-355 FTCSLAETMT VSLMASNILQ DLIDSDELLD PEDMKKPDPA SLRAASCGEG bmy_12171T0/1-311 ---------- ---------- DLIDSDELLD PEDMKKPDPA SLRAASCGEG BACU001836/1-310 ---------- ---------- DLIDSDELLD PEDMKKPDPA SLRAASCGEG 301 350 ENSP00000377914/1-312 KKRKACKNCT CGLAEELEKE KSREQMSSQP KSACGNCYLG DAFRCASCPY ENSBTAP00000002418/1-310 KKRKACKNCT CGLAEELEKE KSRDQISSQP KSACGNCYLG DAFRCASCPY ENSTTRP00000009540/1-355 KKRKACKNCT CGLAEELEKE KLRDQISSQP KSACGNCYLG DAFRCASCPY bmy_12171T0/1-311 KKRKACKNCT CGLAEELERE KSRDQISSQP KSACGNCYLG DAFRCASCPY BACU001836/1-310 KKRKACKNCT CGLAEELERE KSRDQISSQP KSACGNCYLG DAFRCASCPY 351 400 ENSP00000377914/1-312 LGMPAFKPGE KVLLSDSNLH DA ENSBTAP00000002418/1-310 LGMPAFKPGE KVLLSDSNLH DA ENSTTRP00000009540/1-355 LGMPAFRPGE KVLLSDSSLN DA bmy_12171T0/1-311 LGMPAFRPGE KVLLSDSNLN DA BACU001836/1-310 LGMPAFRPGE KVLLSDSNFN DA