KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:17:52 2014 Check: 00 .. Name: bmy_16981T0/1-640 Len: 640 Check: 2423 Weight: 1.00 Name: ENSTTRP00000008166/1-557 Len: 640 Check: 4593 Weight: 1.00 Name: ENSP00000380211/1-557 Len: 640 Check: 6304 Weight: 1.00 Name: ENSBTAP00000002436/1-557 Len: 640 Check: 4792 Weight: 1.00 // 1 50 bmy_16981T0/1-640 MSGPEMAWVP EPPAMTLGAS RVELRVSCHG LLDRDTLTKP HPCVLLKLHS ENSTTRP00000008166/1-557 MSDPEMAWVP EPPAMTLGAS RVELRVSCHG LLDRDTLTKP HPCVLLKLHS ENSP00000380211/1-557 MSDPEMGWVP EPPTMTLGAS RVELRVSCHG LLDRDTLTKP HPCVLLKLYS ENSBTAP00000002436/1-557 MSDPEMAWVP EPPAMTLGAS RVELRVSCHG LLDRDTLTKP HPCVLLKLHS 51 100 bmy_16981T0/1-640 DEQWVEAERT EVLRSCSSPV FSRVLALEYF FEEKQPLQFH VFDAEDGATS ENSTTRP00000008166/1-557 DEQWVEVERT EVLRSCSSPV FSRVLALEYF FEEKQPLQFH VFDAEDGATS ENSP00000380211/1-557 DEQWVEVERT EVLRSCSSPV FSRVLALEYF FEEKQPLQFH VFDAEDGATS ENSBTAP00000002436/1-557 DEQWVEVERT EVLRSCSSPV FSRVLALEYF FEEKQPLQFH VFDAEDGSTS 101 150 bmy_16981T0/1-640 PRNDTFLGST ECTLGQVVSQ TKVTKPLLLK NGKNAGKSTI TIVAEEVSGT ENSTTRP00000008166/1-557 PRNDTFLGST ECTLGQVVSQ TKVTKPLLLK NGKNAGKSTI TIVAEEVSGT ENSP00000380211/1-557 PRNDTFLGST ECTLGQIVSQ TKVTKPLLLK NGKTAGKSTI TIVAEEVSGT ENSBTAP00000002436/1-557 PRNDTFLGST ECTLGQIVSQ TKVTKPLLLK NGKNAGKSTI TIVAEEVSGT 151 200 bmy_16981T0/1-640 NDYVQLTFRA HKLDNKVGNP ESRSPSLLLG SLAPLFRTNP RSQRCSLLGV ENSTTRP00000008166/1-557 NDYVQLTFRA HKLDNK---- ---------- ---------- ---------- ENSP00000380211/1-557 NDYVQLTFRA YKLDNK---- ---------- ---------- ---------- ENSBTAP00000002436/1-557 NDYVQLTFRA HKLDNK---- ---------- ---------- ---------- 201 250 bmy_16981T0/1-640 SHLPLRPHQA HGRFPPCPQD LFSKSDPFME IYKTNGDQSD QLVWRTEVGA ENSTTRP00000008166/1-557 ---------- ---------D LFSKSDPFME IYKTNGDQSD QLVWRTE--- ENSP00000380211/1-557 ---------- ---------D LFSKSDPFME IYKTNEDQSD QLVWRTE--- ENSBTAP00000002436/1-557 ---------- ---------D LFSKSDPFME IYKTNGDQSD QLVWRTE--- 251 300 bmy_16981T0/1-640 WGWGEGGRKG RAGETRSGVT SSLCLFKVVK NNLNPSWEPF RLSLHSLCSC ENSTTRP00000008166/1-557 ---------- ---------- -------VVK NNLNPSWEPF RLSLHSLCSC ENSP00000380211/1-557 ---------- ---------- -------VVK NNLNPSWEPF RLSLHSLCSC ENSBTAP00000002436/1-557 ---------- ---------- -------VVK NNLNPSWEPF RLSLHSLCSC 301 350 bmy_16981T0/1-640 DVHRPLKFLV YDYDSSGKHD FIGEFTSTFQ EMQEGTANPG QEMQWDCINP ENSTTRP00000008166/1-557 DVHRPLKFLV YDYDSSGKHD FIGEFTSTFQ EMQEGTANPG QEMQWDCINP ENSP00000380211/1-557 DVHRPLKFLV YDYDSSGKHD FIGEFTSTFQ EMQEGTANPG QEMQWDCINP ENSBTAP00000002436/1-557 DVHRPLKFLV YDYDSSGKHD FIGEFTSTFQ EMQEGTANPG QEMQWDCINP 351 400 bmy_16981T0/1-640 KYRDKKKNYK SSGTVVLAQC TVEKVHTFLD YIMGGCQINF TVAIDFTASN ENSTTRP00000008166/1-557 KYRDKKKNYK SSGTVVLAQC TVEKVHTFLD YIMGGCQINF TVAIDFTASN ENSP00000380211/1-557 KYRDKKKNYK SSGTVVLAQC TVEKVHTFLD YIMGGCQISF TVAIDFTASN ENSBTAP00000002436/1-557 KYRDKKKHYK SSGTVVLAQC TVEKVHTFLD YIMGGCQISF TVAIDFTASN 401 450 bmy_16981T0/1-640 GDPRSSQSLH CLSPRQPNHY LQALRAVGGI CQDYDSDKRF PAFGFGARIP ENSTTRP00000008166/1-557 GDPRSSQSLH CLSPRQPNHY LQALRAVGGI CQDYDSDKRF PAFGFGARIP ENSP00000380211/1-557 GDPRSSQSLH CLSPRQPNHY LQALRAVGGI CQDYDSDKRF PAFGFGARIP ENSBTAP00000002436/1-557 GDPRSSQSLH CLSPRQPNHY LQALRAVGGI CQDYDSDKRF PAFGFGARIP 451 500 bmy_16981T0/1-640 PNFEVSHDFA INFDPENPEC EEISGVITSY RRCLPQIQLY GPTNVAPIIN ENSTTRP00000008166/1-557 PNFEVSHDFA INFDPENPEC EEISGVITSY RRCLPQIQLY GPTNVAPIIN ENSP00000380211/1-557 PNFEVSHDFA INFDPENPEC EEISGVIASY RRCLPQIQLY GPTNVAPIIN ENSBTAP00000002436/1-557 PNFEVSHDFA INFDPENPEC EEISGVIASY RRCLPQIQLY GPTNVAPIIN 501 550 bmy_16981T0/1-640 RVAGPAQREQ STGQATKYSV LLVLTDGVVS DMAETRAAIV RASRLPMSII ENSTTRP00000008166/1-557 RVAAPAQREQ STGQATKYSV LLVLTDGVVS DMAETRAAIV RASRLPMSII ENSP00000380211/1-557 RVAEPAQREQ STGQATKYSV LLVLTDGVVS DMAETRTAIV RASRLPMSII ENSBTAP00000002436/1-557 RVAGPAQREQ STGQATKYSV LLVLTDGVVS DMAETRTAIV RASRLPMSII 551 600 bmy_16981T0/1-640 IVGVGNADFS DMRLLDGDDG PLRCPRGVPA ARDIVQFVPF RDFKDAAPSA ENSTTRP00000008166/1-557 IVGVGNADFS DMRLLDGDDG PLRCPRGVPA ARDIVQFVPF RDFKDAAPSA ENSP00000380211/1-557 IVGVGNADFS DMRLLDGDDG PLRCPRGVPA ARDIVQFVPF RDFKDAAPSA ENSBTAP00000002436/1-557 IVGVGNADFS DMRLLDGDDG TLRCPRGVPA ARDIVQFVPF RDFKDASPSA 601 650 bmy_16981T0/1-640 LAKCVLAEVP RQVVEYYASQ GISPGPPRSC TPGTTPSPSL ENSTTRP00000008166/1-557 LAKCVLAEVP RQVVEYYASQ GISPGPPRSC TPATTPSPSL ENSP00000380211/1-557 LAKCVLAEVP RQVVEYYASQ GISPGAPRPC TLATTPSPSP ENSBTAP00000002436/1-557 LAKCVLAEVP RQVVEYYASQ GISPGAPRPC TPAMTPSPSP