KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:55 2014 Check: 00 .. Name: ENSTTRP00000003115/1-230 Len: 370 Check: 7630 Weight: 1.00 Name: ENSP00000216540/1-349 Len: 370 Check: 7051 Weight: 1.00 Name: ENSBTAP00000002446/1-370 Len: 370 Check: 5692 Weight: 1.00 Name: bmy_21367T0/1-228 Len: 370 Check: 5576 Weight: 1.00 Name: BACU010771/1-317 Len: 370 Check: 3533 Weight: 1.00 // 1 50 ENSTTRP00000003115/1-230 ---------- ---------- ---------- ---------- ---------- ENSP00000216540/1-349 MEAHNASAPF NFTLPPNFGK RPTDLALSVI LVFMLFFIML SLGCTMEFSK ENSBTAP00000002446/1-370 MEAFNESSPF NFSLPHNFGK RPTDRALSVI LVIMLLTIML SLGCTMEFSK bmy_21367T0/1-228 ---------- ---------- ---------- ---------- ---------- BACU010771/1-317 MEALNESAQF NFSLPHNFGK RPTDWALSVI LVIMLLTIML SLGCTMEFSK 51 100 ENSTTRP00000003115/1-230 ---------- ---------- ---------- ---------- ---------- ENSP00000216540/1-349 IKAHLWKPKG LAIALVAQYG IMPLTAFVLG KVFRLKNIEA LAILVCGCSP ENSBTAP00000002446/1-370 IKAHFWRPKG LAVALVAQFG IMPLTAFGLG KFFQLNNVEA LAILICGCSP bmy_21367T0/1-228 ---------- ---------- ---------- ---------- ---------- BACU010771/1-317 IKVHFWKPKG LAIALVAQYG VMPLTAFALG KVFQLNNVEA LAILICGCSP 101 150 ENSTTRP00000003115/1-230 ---------- ---------I VMTTCSTFFA LGMMPLLLYI YSRGIYDGTL ENSP00000216540/1-349 GGNLSNVFSL AMKGDMNLSI VMTTCSTFCA LGMMPLLLYI YSRGIYDGDL ENSBTAP00000002446/1-370 GGNLSNVFAL AIKGDMNLSI VMTTCSTFFA LGMMPLLLYL YSRGIYDGSL bmy_21367T0/1-228 ---------- ---------- -MTTCSTFFA LGMMPLLLYV YSRGIYDGTL BACU010771/1-317 GGNLSNVFTL AMKGDMNLSI VMTTCSTFFA LGMMPLLLYI YSRGIYDGTL 151 200 ENSTTRP00000003115/1-230 KDKVPYGNIM ISLILILIPC TIGIILKSKR PQYVRYVTKG GMILLLLCSV ENSP00000216540/1-349 KDKVPYKGIV ISLVLVLIPC TIGIVLKSKR PQYMRYVIKG GMIIILLCSV ENSBTAP00000002446/1-370 KDKVPYGGIM ISLILILIPC TIGIILKSKR PQYVRYVTKG GIILLLLCSV bmy_21367T0/1-228 KDKVPYGGII ISLILILIPC TIGIILKSKR PQYVRYVTKG GMILLLLCSV BACU010771/1-317 KDKVPYGGII ISLILILIPC TIGIILKSKR PQYVRYVTKG GMILLLLCSV 201 250 ENSTTRP00000003115/1-230 AVVVLSVLNV GKSILFVMTP HLLATSSLMP FIGFLLGYVL SALFRLNGRX ENSP00000216540/1-349 AVTVLSAINV GKSIMFAMTP LLIATSSLMP FIGFLLGYVL SALFCLNGRC ENSBTAP00000002446/1-370 AVVVLSAINV GKSILFVMTP HLLATSSLMP FIGFLLGYLL SALFCLNGRC bmy_21367T0/1-228 AVVVLSVLNV GKSILFVMTP HLLATSSLMP FIGFLLGYVL SALFRLNRRC BACU010771/1-317 AVVVLSVLNV GKSILFVMTP HLLATSSLMP FIGFLLGYIL SALFRLNRRC 251 300 ENSTTRP00000003115/1-230 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000216540/1-349 RRTVSMETGC QNVQLCSTIL NVAFPPEVIG PLFFFPLLYM IFQLGEGLLL ENSBTAP00000002446/1-370 KRTVSMETGC QNIQLCSTIL NVTFPPEVIG PLFFFPLLYM IFQVGEGLLL bmy_21367T0/1-228 RRTVSMETGC QNIQLCSTIL NVTFPPEVIG PLFFFPLLYM IFQLGEGLLL BACU010771/1-317 RRTVSMETGC QNIQLCSTIL NVTFPPEVIG PLFFFPLLYM IFQLGEGLLL 301 350 ENSTTRP00000003115/1-230 XXXXXXXXXX XXXXXKTKMI YKADTTEETI PTALGNGTHR GEACPPCTA- ENSP00000216540/1-349 IAIFWCYEKF KTPKDKTKMI YTAATTEETI PGALGNGTYK GEDCSPCTA- ENSBTAP00000002446/1-370 VAIFRCYEKF KTPRDDTKMT YKVDATEETL PTALGNGTYK GEECNIGFTS bmy_21367T0/1-228 IAIFRCYEKI KPSKHKTEMI YKADTTEETL PTALGNGTHE GEACPPYTA- BACU010771/1-317 IAIFRCYEKI KPSKRKY--- ---------- ---------- ---------- 351 400 ENSTTRP00000003115/1-230 ---------- ---------- ENSP00000216540/1-349 ---------- ---------- ENSBTAP00000002446/1-370 GFPKELDSGQ KATEQLNMAN bmy_21367T0/1-228 ---------- ---------- BACU010771/1-317 ---------- ----------