KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:17:56 2014 Check: 00 .. Name: ENSP00000263904/1-525 Len: 526 Check: 2240 Weight: 1.00 Name: ENSBTAP00000002456/1-377 Len: 526 Check: 4396 Weight: 1.00 Name: bmy_10693T0/1-507 Len: 526 Check: 250 Weight: 1.00 Name: BACU010041/1-497 Len: 526 Check: 6313 Weight: 1.00 Name: ENSTTRP00000014767/1-526 Len: 526 Check: 9243 Weight: 1.00 // 1 50 ENSP00000263904/1-525 MPLFTANPFE QDVEKATNEY NTTEDWSLIM DICDKVGSTP NGAKDCLKAI ENSBTAP00000002456/1-377 ---------- ---------- ---------- ---------- ---------- bmy_10693T0/1-507 MPLFTANHFE ---------- ---------Q DVVLQVYEQN IVAKDCLKAI BACU010041/1-497 ---------- ---------- ---------M DICDKVGSTP NGAKDCLKAI ENSTTRP00000014767/1-526 MPLFTANHFE QDVEKATNEY NTTEDWSLIM DICDKVGSTP NGAKDCLKAI 51 100 ENSP00000263904/1-525 MKRVNHKVPH VALQALTLLG ACVANCGKIF HLEVCSRDFA TEVRAVIKNK ENSBTAP00000002456/1-377 ---------- ---------- ---------- ---------- ---------- bmy_10693T0/1-507 MKRVNHKVPH VALQALTLLG ACVANCGKIF HLEVCSRDFA TEVRAVIKNK BACU010041/1-497 MKRVNHKVPH VALQALTLLG ACVANCGKIF HLEVCSRDFA TEVRAVIKNK ENSTTRP00000014767/1-526 MKRVNHKVPH VALQALTLLG ACVANCGKIF HLEVCSRDFA TEVRAVIKNK 101 150 ENSP00000263904/1-525 AHPKVCEKLK SLMVEWSEEF QKDPQFSLIS ATIKSMKEEG ITFPPAGSQT ENSBTAP00000002456/1-377 ---------- ---------- ---------- ---------- --------QT bmy_10693T0/1-507 AHPKVCEKLK SLMVEWSEEF QKDPQFSLIS ATIKSMKEEG ITFPSAGSQT BACU010041/1-497 AHPKVCEKLK SLMVEWSEEF QKDPQFSLIS ATIKSMKEEG ITFPSAGSQT ENSTTRP00000014767/1-526 AHPKVCEKLK SLMVEWSEEF QKDPQFSLIS ATIKSMKEEG ITFPSAGSQT 151 200 ENSP00000263904/1-525 VSAAAKNGTS SNKNKEDEDI AKAIELSLQE QKQQHTETKS LYPSSEIQLN ENSBTAP00000002456/1-377 VSAAAKNGTS SNKNKEDEDI AKAIELSLQE QKQQHTETKS LYPSAEIQSN bmy_10693T0/1-507 VSVAAKNGTS SNKNKEDEDI AKAIELSLQE QKQQHTETKS LYPSAEIQSN BACU010041/1-497 VSVAAKNGTS SNKNKEDEDI AKAIELSLQE QKQQHTETKS LYPSAEIQSN ENSTTRP00000014767/1-526 VSVAAKNGTS LNKNKEDEDI AKAIELSLQE QKQQHTETKS LYPSAEIPSN 201 250 ENSP00000263904/1-525 NKVARKVRAL YDFEAVEDNE LTFKHGEIII VLDDSDANWW KGENHRGIGL ENSBTAP00000002456/1-377 NKVARKVRAL YDFEAVEDNE LTFKHGEIII VLDDSDANWW KGENHRGIGL bmy_10693T0/1-507 NKVARKVRAL YDFEAVEDNE LTFKHGEIII VLDDSDANWW KGENHRGIGL BACU010041/1-497 NKVARKVRAL YDFEAVEDNE LTFKHGEIII VLDDSDANWW KGENHRGIGL ENSTTRP00000014767/1-526 NKVARKVRAL YDFEAVEDNE LTFKHGEIII VLDDSDANWW KGENHRGIGL 251 300 ENSP00000263904/1-525 FPSNFVTTNL NIETEAAAVD KLNVIDDDVE EIKKSEPEPV YIDEDKMDRA ENSBTAP00000002456/1-377 FPSNFVTCNL NIESE-AAVD KLNIIDDEEE EIKKSEPEPV YIDEDKMDRA bmy_10693T0/1-507 FPSNFVTTNL NIEPEAAAVD KLNVIDDEEE EIKKSEPEPV YIDEDKMDRA BACU010041/1-497 FPSNFVTTNL NIEPEAAAVD KLNVIDDEEE EIKKSEPEPV YIDEDKMDRA ENSTTRP00000014767/1-526 FPSNFVTTNL NIEPEAAAVD KLNVIDDEEE EIKKSEPEPV YIDEDKMDRA 301 350 ENSP00000263904/1-525 LQVLQSIDPT DSKPDSQDLL DLEDICQQMG PMIDEKLEEI DRKHSELSEL ENSBTAP00000002456/1-377 LQVLQSIDPT DSKPDSQDLL DLEDICQQMG PMIDEKLEEI DRKHSELSEL bmy_10693T0/1-507 LQVLQSIDPT DSKPDSQDLL DLEDICQRMG PMIDEKLEEI DRKHSELSEL BACU010041/1-497 LQVLQSIDPT DSKPDSQDLL DLEDICQRMG PMIDEKLEEI DRKHSELSEL ENSTTRP00000014767/1-526 LQVLQSIDPT DSKPDSQDLL DLEDICQRMG PMIDEKLEEI DRKHSELSEL 351 400 ENSP00000263904/1-525 NVKVLEALEL YNKLVNEAPV YSVYSKLHPP AHYPPASSGV PMQTYPVQSH ENSBTAP00000002456/1-377 NVKVLEALEL YNKLMNEAPV YAVYSKIHHP AHYPTSSAGV PIQTYPVQPH bmy_10693T0/1-507 NVKVLEALEL YNKLMNEAPV YSVYSKIHHP ARYPPSSAGV PMQTYPVQPH BACU010041/1-497 NVKVLEALEL YNKLMNEAPV YSVYSKIHHP AHYPPSSAGV PMQTYPVQPH ENSTTRP00000014767/1-526 NVKVLEALEL YNKLMNEAPV YSVYSKIHHP AHYPPSSAGV PMQTYPVQPH 401 450 ENSP00000263904/1-525 GGNYMGQSIH QVTVAQSYSL GPDQIGPLRS LPPNVNSSVT AQPAQTSYLS ENSBTAP00000002456/1-377 GGNYMGQSIH QVTVAQSYSL GPDQIGPLRS LPPTVNSSVT TQPAQTPYLS bmy_10693T0/1-507 GANYMGQSIH QVTVAQSYSL GPDQIGPLRS LPPNVNSSVT TQPAPTPYLS BACU010041/1-497 GANYMGQSIH QVTVAQSYSL GPDQIGPLRS MPPNVNSSVT TQPAPTPYLS ENSTTRP00000014767/1-526 GANYMGQSIH QVTVAQSYSL GPDQIGPLRS LPPNVNSSVT TQPAPTPYLS 451 500 ENSP00000263904/1-525 TGQDTVSNPT YMNQNSNLQS ATGTTAYTQQ MGMSVDMSSY QNTTSNLPQL ENSBTAP00000002456/1-377 TGQDTISNPT YMNQNSNLQS APGAAAYTQQ MGMSVDMSSY QNATSNLPQL bmy_10693T0/1-507 AGQDTVSNPT YMNQNSHLQS ATGAAAYTQQ MGMSVDLSSH QSTTSSLPRS BACU010041/1-497 AGQDTVSNPT YMNQNSHLQS ATGAAAYTQQ MGMSVDLSSH QSTTSSLPRS ENSTTRP00000014767/1-526 AGQDTVSNPT YMNQNSHLQS ATGAAAYTQQ MGMSVDLSSH QSTTSSLPRS 501 550 ENSP00000263904/1-525 AGFPVTVPAH PVAQQHTNYH -QQPLL ENSBTAP00000002456/1-377 AGFPVAVPAH SVAQQQTNYH QQQPLL bmy_10693T0/1-507 AGFVVAAPAH SVAQQQTDYP QQQPLL BACU010041/1-497 AGFAVAAPAH SVAQQQTDYP QQQPLL ENSTTRP00000014767/1-526 AGFAVAAPAH SVSQQQTDYP QQQPLL