KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:06 2014 Check: 00 .. Name: ENSP00000415836/1-614 Len: 619 Check: 3598 Weight: 1.00 Name: ENSBTAP00000002476/1-603 Len: 619 Check: 7658 Weight: 1.00 Name: ENSTTRP00000004160/1-528 Len: 619 Check: 7450 Weight: 1.00 Name: BACU018901/1-528 Len: 619 Check: 8528 Weight: 1.00 Name: bmy_14292T0/1-528 Len: 619 Check: 7943 Weight: 1.00 // 1 50 ENSP00000415836/1-614 MKRDRLGRFL SPGSSRQCGA SD----GGGG VSRTRGRPSL SGGPRVDGAT ENSBTAP00000002476/1-603 MKRDRLGRFL SPAASRQRGS SGRGSCGGGR VRGRPARSGP DVAEAAAVVA ENSTTRP00000004160/1-528 ---------- ---------- ---------- ---------- ---------- BACU018901/1-528 ---------- ---------- ---------- ---------- ---------- bmy_14292T0/1-528 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000415836/1-614 ARRAWGPVGS CGDAGEDGAD EAGAGRALAM GHCRLCHGKF SSRSLRSISE ENSBTAP00000002476/1-603 ARLGWGPARP CGDAGEDGAD EAGTARALAM GHCRLCHGKF SSRSLRSISG ENSTTRP00000004160/1-528 ---------- ---------- ---------M GHCRLCHGKF SSRSLRSISG BACU018901/1-528 ---------- ---------- ---------M GHCRLCHGKF SSRSLRSISG bmy_14292T0/1-528 ---------- ---------- ---------M GHCRLCHGKF SSRSLRSISG 101 150 ENSP00000415836/1-614 RAPGASMERP SAEERVLVRD FQRLLGVAVR QDPTLSPFVC KSCHAQFYQC ENSBTAP00000002476/1-603 RAPGESSERP PPGDRVFIRD FQRLLGVAVH QDPALSQFIC KNCHAQFYQC ENSTTRP00000004160/1-528 RAPGESAERP APGDRVFVRD FQRLLGVAVQ QDPALPQFVC KNCHTQFYQC BACU018901/1-528 RAPGESSERP PPGDRVFVRD FQRLLGVAVH QDPALSQFVC KNCHSQFYQC bmy_14292T0/1-528 RAPGESSERP PPGDRVFVRD FQRLLGVAVH QDPALSQFVC KNCHAQFYQC 151 200 ENSP00000415836/1-614 HSLLKSFLQR VNASPAGRRK PCAKVGAQPP TGAEEGACLV DLITSSPQCL ENSBTAP00000002476/1-603 HGLLTSFLQR VNVPPTGRRK PCAKVGVQPR MGPEEGACVV DLIASSPQGL ENSTTRP00000004160/1-528 HGLLTSFLQR VNVPPTGRRK PCAKVGVQPR TGAEEGACVV DLIASSPQGL BACU018901/1-528 HGLLTSFLQR VNVPPTGRRK PCAKVGVQPR TGAEEGACVV DLIASSPQGL bmy_14292T0/1-528 HGLLTSFLQR VNVPPTGRRK PCAKVGVQPR TGAEEGACVV DLIASSPQGL 201 250 ENSP00000415836/1-614 HGLVGWVHGH AASCGALPHL QRTLSSEYCG VIQVVWGCDQ GHDYTMDTSS ENSBTAP00000002476/1-603 RGLVGWVHRH AAGCGALPSL QRTLSSEYCG VIRAMWGCDQ GHDYTMDADS ENSTTRP00000004160/1-528 RGLVGWVHGH AAGCGALPSL QRTLSSEYCG IVRAVWGCDR GHDYTMDADS BACU018901/1-528 RGLVGWVHGH VAGGGALPSL QRTLSSEYCG IVRAVWGCDR GHDYTMDADS bmy_14292T0/1-528 RGLVGWVHGH AAGCGALPSL QRTLSSEYCG IVRAVWGCDR GHDYTMDADS 251 300 ENSP00000415836/1-614 SCKAFLLDSA LAVKWPWDKE TAPRLPQHRG WNP-GDAPQT SQGRGTGTPV ENSBTAP00000002476/1-603 SCGALLLDSA LGVKWTWDKD SAPRLPQHRG FNPTGAAPQS SQGKAAAA-- ENSTTRP00000004160/1-528 SCEALLLDGT LGVRRTWDKD LAPGLPRHRG SSPSGAAPQS SQGRAIAA-- BACU018901/1-528 SCGALLLDGA LGVRRTWDKD SAPGLPRHRG SSPSGAAPQS SQGRATAA-- bmy_14292T0/1-528 SCGALLLDGA LGVRRTWDKD LALGLPRHRG SSPSGAAPQS SQGRATAA-- 301 350 ENSP00000415836/1-614 GAETKTLPST DVAQPPSDSD AVGPRSGFPP QPSLPLCRAP GQLGEKQLPS ENSBTAP00000002476/1-603 GAETETLPSM DTSRLPSDGD PVGPGPGPPS QPSLPPGGAP GQLGEKQVPS ENSTTRP00000004160/1-528 GAETETLPST DTARPPSDGD PVGPGPGPPP QPSLPQSGAP GQLGEKQVPS BACU018901/1-528 GAETETLPST DTARPPSDGV PVGPGPGPPP QPSLPHSGAP GQLGEKQVPS bmy_14292T0/1-528 GAETETLPST DTARPPSDGD PVGPGPGPPP QPSLPQSGAP GQLGEKQVPS 351 400 ENSP00000415836/1-614 STSDDRVKDE FSDLSEGDVL SEDENDKKQN AQSSDESFEP YPERKVSGKK ENSBTAP00000002476/1-603 PTSDDRVKDE FSDLSEGDFL SEDENDKKQN TQSSDESFEP YPGKKVSGRK ENSTTRP00000004160/1-528 PTSDDRVKDE FSDLSEGDFL SEDENDKKQN TQSSDESFEP YPEKKISGKK BACU018901/1-528 PTSDDRVKDE FSDLSEGDFL SEDENDKKQN TQSSDESFEP YPEKKVSGKK bmy_14292T0/1-528 PTSDDRVKDE FSDLSEGDFL SEDENDKKQN TQSSDESFEP YPEKKVSGKK 401 450 ENSP00000415836/1-614 SESKEAKKSE EPRIRKKPGP KPGWKKKLRC EREELPTIYK CPYQGCTAVY ENSBTAP00000002476/1-603 SESKEAKKSE EPKIRKKPGP KPGWKGKPRC EREELPTIYK CPHQGCTAVY ENSTTRP00000004160/1-528 SESKEARKSE EPKIRKKPGP KPGWKGKPRC EREELPTIYK CPHQGCTAVY BACU018901/1-528 SESKEAKKSE EPKIRKKPGP KPGWKGKPRC EREELPTIYK CPHQGCTAVY bmy_14292T0/1-528 SESKEAKKSE EPKIRKKPGP KPGWKGKPRC EREELPTIYK CPHQGCTAVY 451 500 ENSP00000415836/1-614 RGADGMKKHI KEHHEEVRER PCPHPGCNKV FMIDRYLQRH VKLIHTEVRN ENSBTAP00000002476/1-603 RGADGMKKHV KEHHEEVRER PCPHPGCNKV FMIDRYLQRH VKLIHTEVRN ENSTTRP00000004160/1-528 RGADGMKKHV KEHHEEVRER PCPHPGCNKV FMIDRYLQRH VKLIHTEVRN BACU018901/1-528 RGADGMKKHI KEHHEEVRER PCPHPGCNKV FMIDRYLQRH VKLIHTEVRN bmy_14292T0/1-528 RGADGMKKHV KEHHEEVRER PCPHPGCNKV FMIDRYLQRH VKLIHTEVRN 501 550 ENSP00000415836/1-614 YICDECGQTF KQRKHLLVHQ MRHSGAKPLQ CEVCGFQCRQ RASLKYHMTK ENSBTAP00000002476/1-603 YICDECGQTF KQRKHLLVHQ MRHSGAKPLQ CEVCGFQCRQ RASLKYHMTK ENSTTRP00000004160/1-528 YICDECGQTF KQRKHLLVHQ MRHSGAKPLQ CEVCGFQCRQ RASLKYHMTK BACU018901/1-528 YICDECGQTF KQRKHLLVHQ MRHSGAKPLQ CEVCGFQCRQ RASLKYHMTK bmy_14292T0/1-528 YICDECGQTF KQRKHLLVHQ MRHSGAKPLQ CEVCGFQCRQ RASLKYHMTK 551 600 ENSP00000415836/1-614 HKAETELDFA CDQCGRRFEK AHNLNVHMSM VHPLTQTQDK ALPLEAEPPP ENSBTAP00000002476/1-603 HKAETELDFA CDQCGRRFEK AHNLNVHMSM VHPLTQ---- A----PEAPP ENSTTRP00000004160/1-528 HKAETELDFA CDQCGRRFEK AHNLNVHMSM VHPLTQTPDK A----PEPPP BACU018901/1-528 HKAETELDFA CDQCGRRFEK AHNLNVHMSM VHPLTQTPDK A----PEPPP bmy_14292T0/1-528 HKAETELDFA CDQCGRRFEK AHNLNVHMSM VHPLTQTPDE A----PEPPP 601 650 ENSP00000415836/1-614 GPPSPSVTTE GQAVKPEPT ENSBTAP00000002476/1-603 RPAA------ GQVVKAEPT ENSTTRP00000004160/1-528 GPAA------ GQAVKAEPT BACU018901/1-528 GPAA------ GQAVKAEPT bmy_14292T0/1-528 GPVA------ GQAVKAEPT