KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:09 2014 Check: 00 .. Name: ENSP00000310459/1-210 Len: 225 Check: 7221 Weight: 1.00 Name: ENSBTAP00000002500/1-183 Len: 225 Check: 9474 Weight: 1.00 Name: ENSTTRP00000004438/1-205 Len: 225 Check: 7804 Weight: 1.00 Name: bmy_04479T0/1-225 Len: 225 Check: 6857 Weight: 1.00 Name: BACU004464/1-156 Len: 225 Check: 4519 Weight: 1.00 // 1 50 ENSP00000310459/1-210 MDNCLAAAAL NGVDRRSLQR SARLALEVLE RAKRRAVDWH ALERPKGCMG ENSBTAP00000002500/1-183 MENCLVAAAL NGVDRRSLQR SARLGQEVLE RAKRRAVDWP SVELPKGSVG ENSTTRP00000004438/1-205 MENCLAAAAL NGVDRRSLQR SARLGQEVLE RAKRRAVDWH SVELPKGSVG bmy_04479T0/1-225 MENCLAAAAL NGVDRRSLQR SARLGQEVLE RAKRRAVDWH SVELPKGSVG BACU004464/1-156 MENCLAAAAL NGVDRRSLQR SARLGQEVLE RAKRRAVDWH SVELPTGSVG 51 100 ENSP00000310459/1-210 VLAREAPHLE KQPAAGPQRV LPGEREERPP TLSASFRTMA EFMDYTSSQC ENSBTAP00000002500/1-183 IVSRVRHYGE RGPAASPQRL LPGKREDRHP TLSASFRTMA EYMNYTSSQC ENSTTRP00000004438/1-205 VISRERPYRE RGLAAGPHRL LPGEREERHP TLSASFRTMA EFMDYTSSQC bmy_04479T0/1-225 VISRERPYRE RGPAAGPHRL LPGEREERHP TLSASFRTMA EFMDYTSSQC BACU004464/1-156 VISRERPYRE RGPAAGPHRL LPGE------ ---------- ---------- 101 150 ENSP00000310459/1-210 GKYYSSVPEE GGATHVYRYH RGESKLHMCL DIGNGQ---- ---------- ENSBTAP00000002500/1-183 GKYYSSAPEE GGATHVYRYH RGTSELHLCS DAGSGQ---- ---------- ENSTTRP00000004438/1-205 GKYYSSVPEE RGATHVYRYH RGKSKLHLCS DWND------ ---------- bmy_04479T0/1-225 GKYYSSVPEE GGATHVYRYH RGKSKLHLCS DTGNGQLPWL YSKIANLSSE BACU004464/1-156 -KYYSSVPEE GGATHVYRYH RGKSKLHLCS DTGNGQ---- ---------- 151 200 ENSP00000310459/1-210 -RKDRKKTSL GPGGSYQISE HAPEASQPAE NISKDLYIEV YPGTYSVTVG ENSBTAP00000002500/1-183 ---------- ---------- --------AE NISKDLYIEV YPGTYSVTVG ENSTTRP00000004438/1-205 ----RKDTPL GVGGIRQTSE CALEASQPAE NISKDLYIEV YPGTYSITVG bmy_04479T0/1-225 SNPQRKDTPL GVGGIHQASE CALEASQPAE DISKDLYIEV YPGTYSVTVG BACU004464/1-156 ---------- ---------- --------AE DISKDLYIEV YPGTYSVTVG 201 250 ENSP00000310459/1-210 SNDLTKKTHV VAVDSGQSVD LVFPV ENSBTAP00000002500/1-183 ADDLTKKTHI VAVDSGQSVD LVFPI ENSTTRP00000004438/1-205 VNDLTKKTYM VAVDSGQSVD LVFPI bmy_04479T0/1-225 VNDLTKKTHV VAVDSGQSVD LVFLI BACU004464/1-156 VNDLTKKTHV VAVDSGQSVD LVFLI