KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:14 2014 Check: 00 .. Name: ENSP00000283916/1-418 Len: 418 Check: 2053 Weight: 1.00 Name: ENSBTAP00000002505/1-418 Len: 418 Check: 5808 Weight: 1.00 Name: ENSTTRP00000007389/1-417 Len: 418 Check: 3523 Weight: 1.00 Name: bmy_20604T0/1-310 Len: 418 Check: 4291 Weight: 1.00 Name: BACU015718/1-380 Len: 418 Check: 9177 Weight: 1.00 // 1 50 ENSP00000283916/1-418 MYRPARVTST SRFLNPYVVC FIVVAGVVIL AVTIALLVYF LAFDQKSYFY ENSBTAP00000002505/1-418 MYRPARVTSA SRSLNPYLVF FVVVAVVVIL AVIIGLLVYF LAFDQKSYFY ENSTTRP00000007389/1-417 MYRPSGVPSA SRSVNPSIVC FVVIAVVAIL AVTTGLLVYF LAFGQKDYFY bmy_20604T0/1-310 ---------- MRASKPNVP- ---------- ---------- ---NAHSFSE BACU015718/1-380 -----MTFST QKTSHTEGAV TFDLAGVKWA ---------- ---GQKHYFY 51 100 ENSP00000283916/1-418 RSSFQLLNVE YNSQLNSPAT QEYRTLSGRI ESLITKTFKE SNLRNQFIRA ENSBTAP00000002505/1-418 QSSIQILGKQ YSDELSSPAT EKYRTLSGRI ESMITKTFKE SDLKNEFIKA ENSTTRP00000007389/1-417 SSSLEILNVQ YTDELSSPIT QKYRLLSEKI ESAITKTFEE SNLRSQFIRA bmy_20604T0/1-310 KESTKI--RQ SGNDVIADIV MKFK------ ---------- ---------- BACU015718/1-380 RSSIQILNVQ YSDELSSSVT QKYRNLSGNI ESMITRTFKE SNLRKQFIRA 101 150 ENSP00000283916/1-418 HVAKLRQDGS GVRADVVMKF QFTRNNNGAS MKSRIESVLR QMLNNSGNLE ENSBTAP00000002505/1-418 HVVKLRQSGN NVIADIIMKF KFTRRINEAS MKSRIESILR QMPNNSEDLN ENSTTRP00000007389/1-417 XXXXXXQSGS NVIGDTVMKF KFARNSNEPS VKRKIQSVLQ QMPNNPGNLT bmy_20604T0/1-310 ---------- ---------- -FTRNNNGPS VKSRIESVLR QMLNNSGNLH BACU015718/1-380 HVVKLR---- ---------- --PRSPTGSP AAKQTGKALA VFPSVPS--- 151 200 ENSP00000283916/1-418 INPSTEITSL TDQAAANWLI NECGAGPDLI TLSEQRILGG TEAEEGSWPW ENSBTAP00000002505/1-418 MNPTQVILAI TGQDTIQLFT RECGVRSDLI TLSEERIIGG SKAEKGDWPW ENSTTRP00000007389/1-417 MNA-IDLKQI THKDTEDILT KECGVRPDLI SLSAERIIGG TKAKEGDWPW bmy_20604T0/1-310 INS------- -------LFP LECGLRPDLI TLSAERIIGG TKAKEGDWPW BACU015718/1-380 -HPSPTISPR VSPVAAGPLT MECGARPDLI TLSAERIIGG TKAKEGDWPW 201 250 ENSP00000283916/1-418 QVSLRLNNAH HCGGSLINNM WILTAAHCFR SNSNPRDWIA TSGISTTFPK ENSBTAP00000002505/1-418 QVSLQWSSSH RCGGALISNR WILSAAHCFR SHSDPRQWIA TFGTSTISPQ ENSTTRP00000007389/1-417 QVSLQWDNLH HCGGVFISKE WILTAAHCFK SRSDTLQWTV TFGISTIFPK bmy_20604T0/1-310 QVSLQWSGVH HCGGVLISN- ---------- SHSDTLQWTV TFGISITFPK BACU015718/1-380 QVSLQWSGVH HCGGVLISKK WILTAAHCFR SHSDTRQWTV TFGISTTFPK 251 300 ENSP00000283916/1-418 LRMRVRNILI HNNYKSATHE NDIALVRLEN SVTFTKDIHS VCLPAATQNI ENSBTAP00000002505/1-418 LRVGVRNILI HDNYKPETHE NDIALVQLDR EVTFNRYIHT VCLPEANQAI ENSTTRP00000007389/1-417 EKRRIRTILI HNNYNPETHE NDIALLQLDR EVTFTRNIRT VCLPDASQNI bmy_20604T0/1-310 ERRGVRTILI HNNYKPETHE NDIALLQLDR EVTFTRDIHT VCLPEASQNI BACU015718/1-380 ERRGVRTILI HNNYRPETHE NDIALLQLDK EVTFSRNIHT VCLPEASQYI 301 350 ENSP00000283916/1-418 PPGSTAYVTG WGAQEYAGHT VPELRQGQVR IISNDVCNAP HSYNGAILSG ENSBTAP00000002505/1-418 SAGSTAYVTG WGSQSYSGST VSDLNQGRVN IISNTVCNTP AGYNGAVLSG ENSTTRP00000007389/1-417 LPGSPAYVTG WGSQRYSGSQ VPDLQQARVK IISNNVCNKP SSYNGAILPG bmy_20604T0/1-310 PPGSTAYVTG WGSQKYTGST VPYLEQARVK IISNSVCNAP SSYNGAILPG BACU015718/1-380 PPGSTAYVTG WGSQKYTGST VSDLQQARVN IISNNVCNAP SSYNGAILPG 351 400 ENSP00000283916/1-418 MLCAGVPQGG VDACQGDSGG PLVQEDSRRL WFIVGIVSWG DQCGLPDKPG ENSBTAP00000002505/1-418 MLCAGLPEGG VDACQGDSGG PLVQEDSRQH WFIVGIVSWG YQCGLPDKPG ENSTTRP00000007389/1-417 MLCAGLSQGG VDACQGDSGG PLVQEDARQL WFLVGIVSWG YQCALPDKPG bmy_20604T0/1-310 MICAGLPQGG ADACQGDSGG PLVQEDERHL WFLVGIVSWG YKCGLPDKPG BACU015718/1-380 MLCAGLSQGG ADACQGDSGG PLVQEDERQL WFLVGIVSWG YQCGLPDKPG 401 450 ENSP00000283916/1-418 VYTRVTAYLD WIRQQTGI ENSBTAP00000002505/1-418 VYTRVTAYRD WITQQTGI ENSTTRP00000007389/1-417 VYTLVTAYRE WIHEQAGI bmy_20604T0/1-310 VYTLVTAYRD WIKQHAEI BACU015718/1-380 VYTLVTAYHD WIKKHTGI