KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:14 2014 Check: 00 .. Name: ENSP00000350708/1-409 Len: 411 Check: 2902 Weight: 1.00 Name: ENSBTAP00000002506/1-408 Len: 411 Check: 2177 Weight: 1.00 Name: ENSTTRP00000007189/1-409 Len: 411 Check: 6806 Weight: 1.00 Name: bmy_07259T0/1-351 Len: 411 Check: 8597 Weight: 1.00 Name: BACU019329/1-386 Len: 411 Check: 6277 Weight: 1.00 // 1 50 ENSP00000350708/1-409 MQVTLKTLQQ QTFKIDIDPE ETVKALKEKI ESEKGKDAFP VAGQKLIYAG ENSBTAP00000002506/1-408 MLVTLKTLQQ QTFKIDIDPD ETVRALKEKI ESEKGKDAFP VAGQKLIYAG ENSTTRP00000007189/1-409 MLVTL-TLQQ QTFXXXXXXX XXVRALKEKI ESEKGKDAFP VAGQKLIYAG bmy_07259T0/1-351 MLVTLKTLQQ QTFKIDIDPD ETVRALKEKI ESEKGKDAFP VAGQKLIYAG BACU019329/1-386 ---------- ---------- --VRALKEKI ESEKGKDAFP VAGQKLIYAG 51 100 ENSP00000350708/1-409 KILNDDTALK EYKIDEKNFV VVMVTKPKAV STPAPATTQQ SAPASTTAVT ENSBTAP00000002506/1-408 KILNDDTALK EYKIDEKNFV VVMVTKPKAV TTPAPATTQQ SNSAATTTVS ENSTTRP00000007189/1-409 KILNDDTALK EYKIDEKNFV VVMVTKPKAV TTPAPATTQQ SNSATTTTVS bmy_07259T0/1-351 KILNDDTALK EYKIDEKNFV VVMVTKPKAV TTPAPATTQQ SNSATTTTVT BACU019329/1-386 KILNDDTALK EYKIDEKNFV VVMVTKPKAV TTPAPATTQQ SNSATTTTVT 101 150 ENSP00000350708/1-409 SSTTTTVAQA PTPVPAL--A PTSTPASITP ASATASSEPA PASAAKQEKP ENSBTAP00000002506/1-408 SSTAPAVTQA PAPAPAS--A PTPTPVSVTP APTTASSEPA PASAAKQEKP ENSTTRP00000007189/1-409 SSTAPTVVQA PTPAPTLAPA PAPTPASVTP ASTTASSEPA PASATKQEKP bmy_07259T0/1-351 FSTAPAVVQA PTPAPTL--A PTPTPASVTP ASTTASSEPA PASATKQEKP BACU019329/1-386 FSTAPAVVQA PTPAPTL--A PTPTPASVTP ASTTASSEPA PASATKQEKP 151 200 ENSP00000350708/1-409 AEKPAETPVA TSPTATDSTS GDSSRSNLFE DATSALVTGQ SYENMVTEIM ENSBTAP00000002506/1-408 AERPVETPVA TTPTSTDSTS GDSSRSNLFE DATSALVTGQ SYENMVTEIM ENSTTRP00000007189/1-409 AEKPAETPVA ASPTSTDSTS GDSSRSNLFE DATSALVTGQ SYENMVTEIM bmy_07259T0/1-351 AEKPAETPVA ASPTSTDSTS GDSSRSNLFE DATSALVTGQ SYENMVTEIM BACU019329/1-386 AEKPAETPVA ASPTSTDSTS GDSSRSNLFE DATSALVTGQ SYENMVTEIM 201 250 ENSP00000350708/1-409 SMGYEREQVI AALRASFNNP DRAVEYLLMG IPGDRESQAV VDPPQAASTG ENSBTAP00000002506/1-408 SMGYEREQVI AALRASFNNP DRAVEYLLMG IPGDRESQAV VDPPPAASTG ENSTTRP00000007189/1-409 SMGYEREQVI AALRASFNNP DRAVEYLLMG IPGDRESQAV VDPPPAASTG bmy_07259T0/1-351 SMGYEREQVI AALRASFNNP DRAVEYLLMG IPGDRESQAV VDPPPAASTG BACU019329/1-386 SMGYEREQVI AALRASFNNP DRAVEYLLMG IPGDRESQAV VDPPPAASTG 251 300 ENSP00000350708/1-409 APQSSAVAAA AATTTATTTT TSSGGHPLEF LRNQPQFQQM RQIIQQNPSL ENSBTAP00000002506/1-408 APQSS-VAAA AATTTATTTT TSSGGHPLEF LRNQPQFQQM RQIIQQNPSL ENSTTRP00000007189/1-409 APQSS-VAAA AATTTATTTT TSSGGHPLEF LRNQPQFQQM RQIIQQNPSL bmy_07259T0/1-351 APQSS-VAAA AATTTATTTT TSSGGHPLEF LRNQPQFQQM RQIIQQNPSL BACU019329/1-386 APQSS-VAAA AATTTATTTT TSSGGHPLEF LRNQPQFQQM RQIIQQNPSL 301 350 ENSP00000350708/1-409 LPALLQQIGR ENPQLLQQIS QHQEHFIQML NEPVQEAGGQ GGGGGGGSGG ENSBTAP00000002506/1-408 LPALLQQIGR ENPQLLQQIS QHQEHFIQML NEPVQEAGGQ GGGGGGGSGG ENSTTRP00000007189/1-409 LPALLQQIGR ENPQLLQQIS QHQEHFIQML NEPVQEAGGQ GGGSGGGSGG bmy_07259T0/1-351 LPALLQQIGR ENPQLLQ--- ---------- ---------- ---------- BACU019329/1-386 LPALLQQIGR ENPQLLQQIS QHQEHFIQML NEPVQEAGGQ GGGGGGGSGG 351 400 ENSP00000350708/1-409 IAEAGSGHMN YIQVTPQEKE AIERLKALGF PEGLVIQAYF ACEKNENLAA ENSBTAP00000002506/1-408 IAEAGGGHMN YIQVTPQEKE AIERLKALGF PEGLVIQAYF ACEKNENLAA ENSTTRP00000007189/1-409 IAEAGSGHMN YIQVTPQEKE AIERLKALGF PEGLVIQAYF ACEKNENLAA bmy_07259T0/1-351 ---------- ---------- ----LKALGF PEGLVIQAYF ACEKNENLAA BACU019329/1-386 IAEAGSGHMN YIQVTPQEKE AIERLKALGF PEGLVIQAYF ACEKNENLAA 401 450 ENSP00000350708/1-409 NFLLQQNFDE D ENSBTAP00000002506/1-408 NFLLQQNFDE D ENSTTRP00000007189/1-409 NFLLQQNFDE D bmy_07259T0/1-351 NFLLQQNFDE D BACU019329/1-386 NFLLQQNFDE D