KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:15 2014 Check: 00 .. Name: ENSTTRP00000012488/1-486 Len: 509 Check: 8075 Weight: 1.00 Name: BACU016778/1-461 Len: 509 Check: 3108 Weight: 1.00 Name: bmy_07145T0/1-467 Len: 509 Check: 2932 Weight: 1.00 Name: ENSP00000272227/1-440 Len: 509 Check: 4456 Weight: 1.00 Name: ENSBTAP00000002508/1-453 Len: 509 Check: 424 Weight: 1.00 // 1 50 ENSTTRP00000012488/1-486 MRKDRERHLV FWARAPVEVP ANTRVKVQTS AASLARPLSG RNPICPTAMA BACU016778/1-461 ---------- ---------- ---------- ---MAR---- ---------- bmy_07145T0/1-467 EDWPWGGGGA VRRRGGGGWT ARLLDYAVAP ALGMAR---- ---------- ENSP00000272227/1-440 ---------- ---------- ---------- ---MAL---- ---------- ENSBTAP00000002508/1-453 ---------- ---------- RRRLECVAAR ALSMAR---- ---------- 51 100 ENSTTRP00000012488/1-486 IAPGLMSCTL FIAVNGLY-S SDDVIELTPS NFNREVIQSD SLWLVEFYAP BACU016778/1-461 LVLGLMGCTL FIAVNGLYSS SDDVIELTPS NFNREVIQSD SLWLVEFYAP bmy_07145T0/1-467 LVLGLMGCTL FIAVNGLYSS SDDVIELTPS NFNREVIQSD SLWLVEFYAP ENSP00000272227/1-440 LVLGLVSCTF FLAVNGLYSS SDDVIELTPS NFNREVIQSD SLWLVEFYAP ENSBTAP00000002508/1-453 LVLGLMSCTL FITVNGLYSS SDDVIELTPS NFNREVIQSD SLWLVEFYAP 101 150 ENSTTRP00000012488/1-486 WCGHCQRLTP EWKKVATALK DVVKVGAVDA DKHQSLGGQY GVQGFPTIKI BACU016778/1-461 WCGHCQRLTP EWKKVATALK DVVKVGAVDA DKHQSLGGQY GVQGFPTIKI bmy_07145T0/1-467 W------LTP EWKKVATALK DVVKVGAVDA DKHQSLGGQY GVQGFPTIKI ENSP00000272227/1-440 WCGHCQRLTP EWKKAATALK DVVKVGAVDA DKHHSLGGQY GVQGFPTIKI ENSBTAP00000002508/1-453 WCGHCQRLTP EWKKAATALK DVVKVGAVDA DKHQSLGGQY GVQGFPTIKI 151 200 ENSTTRP00000012488/1-486 FGSNKNQPED YQGGRTGEAI VDAALGALRQ LVKGRLGGRS GGYSSGKQGR BACU016778/1-461 FGSNKNQPED YQGGRTGEAI VDAALSALRQ LVKDRLGGRS GGYSSGKQGR bmy_07145T0/1-467 FGSNKNQPED YQGGRTGEAI VDAALSALRQ LVKDRLGGRS GGYSSGKQGR ENSP00000272227/1-440 FGSNKNRPED YQGGRTGEAI VDAALSALRQ LVKDRLGGRS GGYSSGKQGR ENSBTAP00000002508/1-453 FGSNKNKPED YQGGRTGEAI VDAALSALRQ LVKDRLGGRG SGYSSGKQGR 201 250 ENSTTRP00000012488/1-486 SDSSSKKDVI ELTDDTFDKS VLDSEDVWMV EFYAPWCGHC KNLEPEWAAA BACU016778/1-461 SDSSSKKDVI ELTDDTFDKS VLDSEDVWMV EFYAPWCGHC KNLEPEWAAA bmy_07145T0/1-467 SDSSSKKDVI ELTDDTFDKS VLDSEDVWMV EFYAPWCGHC KNLEPEWAAA ENSP00000272227/1-440 SDSSSKKDVI ELTDDSFDKN VLDSEDVWMV EFYAPWCGHC KNLEPEWAAA ENSBTAP00000002508/1-453 GDSSSKKDVI ELTDDNFDKN VLDSEDVWMV EFYAPWCGHC KNLEPEWAAA 251 300 ENSTTRP00000012488/1-486 ATEVKEQTKG KVKLAAVDAT VNQVLASRYE IRGFPTIKIF QKGESPVDYD BACU016778/1-461 ATEVKEQTKG KVKLAAVDAT VNQVLASRYE IRGFPTIKIF QKGESPVDYD bmy_07145T0/1-467 ATEVKEQTKG KVKLAAVDAT VNQVLASRYE IRGFPTIKIF QKGESPVDYD ENSP00000272227/1-440 ASEVKEQTKG KVKLAAVDAT VNQVLASRYG IRGFPTIKIF QKGESPVDYD ENSBTAP00000002508/1-453 ATEVKEQTKG KVKLAAVDAT VNQVLASRYG IRGFPTIKIF QKGESPVDYD 301 350 ENSTTRP00000012488/1-486 GGRTRSDIVS RALDLFSDNA PPPELLEILS EDIARKACEE YQLCVVAVLP BACU016778/1-461 GGRTRSDIVS RALDLFSDNA PPPELLEILN EDIAKRTCEE HQLCVVAVLP bmy_07145T0/1-467 GGRTRSDIVS RALDLFSDNA PPPELLEILN EDIAKKTCEE HQLCVVAVLP ENSP00000272227/1-440 GGRTRSDIVS RALDLFSDNA PPPELLEIIN EDIAKRTCEE HQLCVVAVLP ENSBTAP00000002508/1-453 GGRTRSDIVS RALDLFSDNA PPPELLEIIN EDVAKKTCEE HQLCVVAVLP 351 400 ENSTTRP00000012488/1-486 HILDTGAAGR NSYLEVLLKL ADKYKKKIWG WLWTEAGAQP ELENALGIGG BACU016778/1-461 HILDTGAAGR NSYLEVLLKL ADKYKKKIWG WLWTEAGAQS ELENALGIGG bmy_07145T0/1-467 HILDTGAAGR NSYLEVLLKL ADKYKKKIWG WLWTEAGAQS ELENALGIGG ENSP00000272227/1-440 HILDTGAAGR NSYLEVLLKL ADKYKKKMWG WLWTEAGAQS ELETALGIGG ENSBTAP00000002508/1-453 HILDTGAAGR NSYLEVLLKL ADKYKKKMWG WLWTEAGAQS ELENALGIGG 401 450 ENSTTRP00000012488/1-486 FGYPAMAAIN ARKMKFALLK GSFSEQGINE FLREL----- ---------- BACU016778/1-461 FGYPAMAAIN ARKMKFALLK GSFSEQGINE FLREPWDGKD GEVSPGTELC bmy_07145T0/1-467 FGYPAMAAIN ARKMKFALLK GSFSEQGINE FLREL----- ---------- ENSP00000272227/1-440 FGYPAMAAIN ARKMKFALLK GSFSEQGINE FLREL----- ---------- ENSBTAP00000002508/1-453 FGYPAMAAIN ARKMKFALLK GSFSEQGINE FLREL----- ---------- 451 500 ENSTTRP00000012488/1-486 -------SFG RGSTAPVGGG VFPAISTREP WDGKDGELPV EDDIDLSDVE BACU016778/1-461 VNRIRCRGFG PAPYFPDPCA SLLLVNKTFP SD-LSLDLPV EDDIDLSDVE bmy_07145T0/1-467 -------SFG RGSTAPVGGG TFPAISTREP WDGKDGELPV EDDIDLSDVE ENSP00000272227/1-440 -------SFG RGSTAPVGGG AFPTIVEREP WDGRDGELPV EDDIDLSDVE ENSBTAP00000002508/1-453 -------SFG RGSTAPVGGG AFPTISTREP WDGKDGELPV EDDIDLSDVE 501 550 ENSTTRP00000012488/1-486 LDDLEKDEL BACU016778/1-461 LDDLEKDEL bmy_07145T0/1-467 LDDLEKDEL ENSP00000272227/1-440 LDDLGKDEL ENSBTAP00000002508/1-453 LDDLEKDEL