KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:18:16 2014 Check: 00 .. Name: ENSP00000319814/1-622 Len: 622 Check: 4438 Weight: 1.00 Name: ENSBTAP00000002520/1-622 Len: 622 Check: 355 Weight: 1.00 Name: bmy_00233T0/1-506 Len: 622 Check: 1210 Weight: 1.00 Name: ENSTTRP00000000645/1-622 Len: 622 Check: 7170 Weight: 1.00 // 1 50 ENSP00000319814/1-622 MPPQLQNGLN LSAKVVQGSL DSLPQAVREF LENNAELCQP DHIHICDGSE ENSBTAP00000002520/1-622 MPPQLSDGLN YSAKIVRGSL DSLPQAVREF VESSAKLCRP DQVHICDGSE bmy_00233T0/1-506 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000645/1-622 MPPQLSGGLS CSARVVQGTL DSLPQAVREF VESNAKLCWP DQIHICDGSE 51 100 ENSP00000319814/1-622 EENGRLLGQM EEEGILRRLK KYDNCWLALT DPRDVARIES KTVIVTQEQR ENSBTAP00000002520/1-622 EENRQLLSHM EEEGVIKRLK KYDNCWLALT DPRDVARIES KTVIITREQR bmy_00233T0/1-506 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000645/1-622 DENRQLLGRM EEEGVIKRLR KYDNCWLALT DPRDVARIES KTVIITQEQR 101 150 ENSP00000319814/1-622 DTVPIPKTGL SQLGRWMSEE DFEKAFNARF PGCMKGRTMY VIPFSMGPLG ENSBTAP00000002520/1-622 DTVPIPKNGL SQLGRWMSEE DFEKAFNIRF PGCMKGRTMY VIPFSMGPLG bmy_00233T0/1-506 ---------- ------MSXE DFEKAFNARF PGCMKGRTMY VIPFSMGPLG ENSTTRP00000000645/1-622 DTVPIPKTGL SQLGRWMSEE DFEKAFNARF PGCMKGRTMY VIPFSMGPLG 151 200 ENSP00000319814/1-622 SPLSKIGIEL TDSPYVVASM RIMTRMGTPV LEAVGDGEFV KCLHSVGCPL ENSBTAP00000002520/1-622 SPLSKIGIEL TDSPYVVTSM RIMTRMGTSV LEALGDGEFV KCLHSVGCPL bmy_00233T0/1-506 SPLSKIGIEL TDSPYVVTSM RIMTRMGTPV LEALGDGEFV KCLHSVGCPL ENSTTRP00000000645/1-622 SPLSRIGIEL TDSPYVVASM RIMTRMGTPV LEVLGDGEFV KCLHSVGCPL 201 250 ENSP00000319814/1-622 PLQKPLVNNW PCNPELTLIA HLPDRREIIS FGSGYGGNSL LGKKCFALRM ENSBTAP00000002520/1-622 PLKKPLVNNW ACNPELTLIA HLPDRREIIS FGSGYGGNSL LGKKCFALRM bmy_00233T0/1-506 PLKKPLVNNW ACNPEMTLIA HLPDRREIIS FGSGYGGNSL LGKKCFALRM ENSTTRP00000000645/1-622 PLQKPLVNNW ACNPEMTLIA HLPDRREIIS FGSGYGGNSL LGKKCFALRM 251 300 ENSP00000319814/1-622 ASRLAKEEGW LAEHMLILGI TNPEGEKKYL AAAFPSACGK TNLAMMNPSL ENSBTAP00000002520/1-622 ASRLAKEEGW LAEHMLILGI TNPKGQKKYF AAAFPSACGK TNLAMMNPTL bmy_00233T0/1-506 ASRLAKEEGW LAEHMLILGI TNPKGQKKYF AAAFPSACGK TNLAMMNPTL ENSTTRP00000000645/1-622 ASRLAKEEGW LAEHMLILGI TNPKGQKKYF AAAFPSACGK TNLAMMNPTL 301 350 ENSP00000319814/1-622 PGWKVECVGD DIAWMKFDAQ GHLRAINPEN GFFGVAPGTS VKTNPNAIKT ENSBTAP00000002520/1-622 PGWKVECVGD DIAWMKFDQQ GNLRAINPEN GFFGVAPGTS VRTNPNAIKT bmy_00233T0/1-506 PGWKVECVGD DIAWMKFDQQ GNLRAINPEN GFFGVAPGTS VKTNPNAIKT ENSTTRP00000000645/1-622 PGWKVECVGD DIAWMKFDQQ GNLRAINPEN GFFGVAPGTS VKTNPNAIKT 351 400 ENSP00000319814/1-622 IQKNTIFTNV AETSDGGVYW EGIDEPLASG VTITSWKNKE WSSEDGEPCA ENSBTAP00000002520/1-622 IQKNTIFTNV AETSDGGVYW EGIDQPLASG IKLISWKGKE WDPKDGEPCA bmy_00233T0/1-506 IQKNTIFTNV AETSDGGVYW EGIDQPLASG IKLISWKGKE WDPKDGEPCA ENSTTRP00000000645/1-622 IQKNTIFTNV AETSDGGVYW EGIDQPLAPG IKLISWKGKE WDPKDGEPCA 401 450 ENSP00000319814/1-622 HPNSRFCTPA SQCPIIDAAW ESPEGVPIEG IIFGGRRPAG VPLVYEALSW ENSBTAP00000002520/1-622 HPNSRFCTPA SQCPIIDPDW ESPEGVPIEG IIFGGRRPVG VPLVYEALSW bmy_00233T0/1-506 HPNSRFCTPA SQCPIIDPDW ESPDGVPIEA IIFGGRRPVG VPLVYESLSW ENSTTRP00000000645/1-622 HPNSRFCTPA SQCPIIDPDW ESPDGVPIEA IIFGGRRPVG VPLVYEALSW 451 500 ENSP00000319814/1-622 QHGVFVGAAM RSEATAAAEH KGKIIMHDPF AMRPFFGYNF GKYLAHWLSM ENSBTAP00000002520/1-622 QHGVFVGAAM RSEATAAAEY KGKVIMHDPF AMRPFFGYNF GQYLAHWLSM bmy_00233T0/1-506 QHGVFVGAAM RSEATAAAEH KGKVIMHDPF AMRPFFGYNF GQYLAHWLSM ENSTTRP00000000645/1-622 QHGVFVGAAM RSEATAAAEH KGKVIMHDPF AMRPFFGYNF GQYLAHWLSM 501 550 ENSP00000319814/1-622 AQHPAAKLPK IFHVNWFRKD KEGKFLWPGF GENSRVLEWM FNRIDGKAST ENSBTAP00000002520/1-622 AQRPAAKLPK IFHVNWFRKD KAGRFLWPGF GENSRVLEWM FNRVVGEGGA bmy_00233T0/1-506 AQRPEAKLPK IFHVNWFRKD KAGRFLWPGF GENSRVLEWM FTRVGGEGGA ENSTTRP00000000645/1-622 AQRPEAKLPK IFHVNWFRKD KAGRFLWPGF GENSRVLEWM FNRVGGEGGA 551 600 ENSP00000319814/1-622 KLTPIGYIPK EDALNLKGLG HINMMELFSI SKEFWEKEVE DIEKYLEDQV ENSBTAP00000002520/1-622 KLTPIGYIPD EDALDLRGLG DVDVKELFHI SKEFWEEEVE EIQKYLEEQV bmy_00233T0/1-506 KLTPIGYIPD EDALDLRGLG EVNVKELFHI SKEFWEEEVE DIQKYLEEQV ENSTTRP00000000645/1-622 KLTPIGYIPD EDALDLQGLG DVSVKELFHI SKEFWEEEVE DIQKYLEGQV 601 650 ENSP00000319814/1-622 NADLPCEIER EILALKQRIS QM ENSBTAP00000002520/1-622 NVDLPPEIKN QVLALKQRIS QM bmy_00233T0/1-506 NADLPHEIES EALALKQRIS QM ENSTTRP00000000645/1-622 NADLPHEIES EVLALKQRIS QM