KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:18 2014 Check: 00 .. Name: ENSP00000345392/1-426 Len: 440 Check: 4995 Weight: 1.00 Name: bmy_21348T0/1-227 Len: 440 Check: 3674 Weight: 1.00 Name: ENSBTAP00000002533/1-425 Len: 440 Check: 9987 Weight: 1.00 Name: BACU017732/1-384 Len: 440 Check: 6750 Weight: 1.00 Name: ENSTTRP00000004679/1-424 Len: 440 Check: 6532 Weight: 1.00 // 1 50 ENSP00000345392/1-426 -MAAVSPTTR CQESVTFEDV AVVFTDEEWS RLVPIQRDLY KEVMLENYNS bmy_21348T0/1-227 MESAKAEHWW GERTSELSAP AHCFPDLKRR RL-PGSRAVC AGGLGTSLQG ENSBTAP00000002533/1-425 -MAAVSPT-R CQDPVTFEDV AVVFTDEEWR RLVPTQRDLY KEVMLENYKS BACU017732/1-384 ---------- ---------- ---------- ---------- ---MLENYKS ENSTTRP00000004679/1-424 -MAAVSPTTR FQDPVTFDDV AVVFTDEEWR CLVPTQRDLY KEVMLENYKS 51 100 ENSP00000345392/1-426 IVS------- -----LGLPV PQPDVIFQLK RGDKPWMVDL HGSEEREWPE bmy_21348T0/1-227 EHSGRNGCCV SNCQIPGLPV PGPDVIFQLK RGDEPWIVEL HGSEGKECAE ENSBTAP00000002533/1-425 IVS------- -----LGLPV PGPDVIFQLK RGDEPWLVEF HGFEGKEGAE BACU017732/1-384 IVS------- -----LGLPV PGPDVIFQLK RGDEPWIVEL HGSEGKECAE ENSTTRP00000004679/1-424 IVS------- -----LGLPV PGPDVIFQLK RGDEPWIVEL HGSEGKECAE 101 150 ENSP00000345392/1-426 SVSLDWETKP EIHDAS-DKK SEGSLRECLG RQSPLCPKFE VHTPNGRMGT bmy_21348T0/1-227 NVSQDWETKP EIQGASEEEK SERTLREKLG MKGPPSPKFE VHAVDGGLGT ENSBTAP00000002533/1-425 NVSLDWETKP EIQGASEEEK SEGSLKENLG RKGPPSPKVE VYVLDGRLGT BACU017732/1-384 NVSQDWETKP EIQGVSEEEK SERTLREKLG VKGPPSPKFE VHAVDGGLGT ENSTTRP00000004679/1-424 NVSQDWETKP EIQGASEEEK SERTLREKLG MKGPSSPKFE VHAVDGGLGT 151 200 ENSP00000345392/1-426 EKQSPSGETR KKSLSRDKGL RRRRSALSRE ILTKERHQEC SDCGKTFFDH bmy_21348T0/1-227 EKESPAVDTC KKSLSQEERL QHGATP-PKK ILTKERDQEC SDCGKTFFDH ENSBTAP00000002533/1-425 EKESLTVEAC KKPPSLEESL RHRATP-PKK FLTKERDQEC SNCGKTFFDH BACU017732/1-384 EKESPAVEAC KKSLSQEERL QHGATP-PKK ILTKERDQEC SDCGKTFFDH ENSTTRP00000004679/1-424 EKESPAVEAC KKSLSQEERL QHGATP-PKK ILTKERDQEC SDCGKTFFDH 201 250 ENSP00000345392/1-426 SSLTRHQRTH TGEKPYDCRE CGKAFSHRSS LSRHLMSHTG ESPYECSVCS bmy_21348T0/1-227 SSLIRHQRTH TGEKPYDCPE CGKAFSHRS- ---------- ---------- ENSBTAP00000002533/1-425 SSLIRHQRTH TGEKPYDCPE CGKAFSHRSS LSRHLMSHTG ESPYECNACG BACU017732/1-384 SSLIRHQRTH TGEKPYDCPE CGKAFSHRSS LSRHLMSHTG ESPYECNACG ENSTTRP00000004679/1-424 SSLIRHQRTH TGEKPYDCPE CGKAFSHRSS LSRHLMSHTG ESPYECNACG 251 300 ENSP00000345392/1-426 KAFFDRSSLT VHQRIHTGEK PFQCNECGKA FFDRSSLTRH QRIHTGESPY bmy_21348T0/1-227 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002533/1-425 KAFFDRSSLT VHQRIHTGEK PFKCSECGKA FFDRSSLTRH QRIHTGESPY BACU017732/1-384 KAFFDRSSLT VHQRIHTGEK PFKCNECGKA FFDRSSLTRH QRIHTGESPY ENSTTRP00000004679/1-424 KAFFDRSSLT VHQRIHTGEK PFKCNECGKA FFDRSSLTRH QRIHTGESPY 301 350 ENSP00000345392/1-426 ECHQCGKAFS QKSILTRHQL IHTGRKPYEC NECGKAFYGV SSLNRHQKAH bmy_21348T0/1-227 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002533/1-425 ECNQCGKAFS QKSILTRHQL IHTGRKPYEC NECGKAFYGV SSLNRHQKAH BACU017732/1-384 ECNQCGKAFS QKSILTRHQL IHTGRKPYEC NECGKAFYGV SSLNRHQKAH ENSTTRP00000004679/1-424 ECNQCGKAFS QKSILTRHQL IHTGRKPYEC NECGKAFYGV SSLNRHQKAH 351 400 ENSP00000345392/1-426 AGDPRYQCNE CGKAFFDRSS LTQHQKIHTG DKPYECSECG KAFSQRCRLT bmy_21348T0/1-227 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002533/1-425 AGEPRYQCSE CGKAFFDRSS LTQHQKIHTG DKPYECSECG KAFSQRCRLT BACU017732/1-384 AGEPRYQCSE CGKAFFDRSS LTQHQKIHTG DKPYECSECG KAFSQRCRLT ENSTTRP00000004679/1-424 AGEPRYQCSE CGKAFFDRSS LTQHQKIHTG DKPYECNECG KAFSQRCRLT 401 450 ENSP00000345392/1-426 RHQRVHTGEK PFECTVCGKV FSSKSSVIQH QRRYAKQGID bmy_21348T0/1-227 ---------- ---------- ---------- ---------- ENSBTAP00000002533/1-425 RHQRVHTGEK PFECSVCGKV FSSKSSVIQH QRRYAKQGID BACU017732/1-384 RHQRVHTGEK PFECSVCGKV FSSKSSVIQH QRRYAKQGID ENSTTRP00000004679/1-424 RHQRVHTGEK PFECSVCGKV FSSKSSVIQH QRRYAKQE--