KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:21 2014 Check: 00 .. Name: ENSP00000362332/1-442 Len: 501 Check: 4137 Weight: 1.00 Name: ENSBTAP00000002546/1-442 Len: 501 Check: 7521 Weight: 1.00 Name: BACU009661/1-497 Len: 501 Check: 8154 Weight: 1.00 Name: ENSTTRP00000006867/1-439 Len: 501 Check: 7833 Weight: 1.00 Name: bmy_08889T0/1-259 Len: 501 Check: 177 Weight: 1.00 // 1 50 ENSP00000362332/1-442 MLVHTYSAME RPDGLGAAAG ---------- ---------- ---------- ENSBTAP00000002546/1-442 MLVHTYSAME RPDGLGAAAG ---------- ---------- ---------- BACU009661/1-497 MAAGPLGAAE GPFGLGPFSC RWXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000006867/1-439 MLVHTYSAME RPDGLGAAAS ---------- ---------- ---------- bmy_08889T0/1-259 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000362332/1-442 ---------- ---------- ------GARL SSLPQAAYGP APPLCHTPAA ENSBTAP00000002546/1-442 ---------- ---------- ------GARL SSLPQAAYGP APPLCHTPT- BACU009661/1-497 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000006867/1-439 ---------- ---------- ------GARL SSLPQAAYGP APQLCHTPTA bmy_08889T0/1-259 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000362332/1-442 TAAAEFQPPY FPPPYPQPPL PYGQAPDAAA AFPHLAGDPY GGLAPLAQPQ ENSBTAP00000002546/1-442 --AADFQPPY FPPPYPQPPL PYGQAPDAAA AFPHLAGDPY GGLAPLAQPQ BACU009661/1-497 -XXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000006867/1-439 -AAADFQPPY FPPPYPQPPL PYGQASDAAA AFPHLAGDPY GGLAPLAQPQ bmy_08889T0/1-259 ---------- ---------- ---------- ---------- ---------- 151 200 ENSP00000362332/1-442 PPQAAWAAPR AAARAHEEPP GLLAPPARAL GLDPRRDY-A TAVPRLLHGL ENSBTAP00000002546/1-442 PPQAAWAAPR AAARAHDEPP GLLAPPARAL GLDPRRDYAA AAVPRLLQGL BACU009661/1-497 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXDPRRDY-A AAVPRLLHGL ENSTTRP00000006867/1-439 PPQAAWAAPR AAARAHDEPP GLLAPPARAL GLDPRRDY-T AAVPRLLHGL bmy_08889T0/1-259 ---------- ---------- ---------- ---------- ---------- 201 250 ENSP00000362332/1-442 ADGAHGLADA PLGLPGLAAA PGLEDLQAMD EPGMSLLDQS VIKKVPIPSK ENSBTAP00000002546/1-442 TEGAHGLADA PLGLQGLAAP PGLEDLQAMD EPGMSLLDQS VIKKVPIPSK BACU009661/1-497 ADGAHGLADA PLGLPGLAVP PGLEDLQAMD EPGMSLLDQS VIKKVPIPSK ENSTTRP00000006867/1-439 ADGAHSLADA PLGLPGLAVP PGLEDLQAMD DPGMSLLDQS VIKKVPIPSK bmy_08889T0/1-259 ---------- ---------- ---------- -MGITI---- -----PIPSK 251 300 ENSP00000362332/1-442 ASSLSALSLA KDSLVGGITN PGEVFCSVPG RLSLLSSTSK YKVTVGEVQR ENSBTAP00000002546/1-442 ASSLSALSLA KDSLVGGIMN PSEVFCSVPG RLSLLSSTSK YKVTVGEVQR BACU009661/1-497 ASSLSALSLA KDSLVGGITN PSEVFCSVPG RLSLLSSTSK YKVTVGEVQR ENSTTRP00000006867/1-439 ASSLSALSLA KDSLVGGITN PSEVFCSVPG RLSLLSSTSK YKVTVGEVQR bmy_08889T0/1-259 ASSLSALSLA KDSLVGGITN PSEVFCSVPG RLSLLSSTSK YKVTVGEVQR 301 350 ENSP00000362332/1-442 RLSPPECLNA SLLGGVLR-- RAKSKNGGRC LRERLEKIGL NLPAGRRKAA ENSBTAP00000002546/1-442 RLSPPECLNA SLLGGVLRRP RAKSKNGGRC LRERLEKIGL NLPAGRRKAA BACU009661/1-497 RLSPPECLNA SLLGGVLR-- RAKSKNGGRC LRERLEKIGL NLPAGRRKAA ENSTTRP00000006867/1-439 RLSPPECLNA SLLGGVLR-- RAKSKNGGRC LRERLEKIGL NLPAGRRKAA bmy_08889T0/1-259 RLSPPECLNA SLLGGVLR-- RAKSKNGGRC LRERLEKIGL NLPAGRRKAA 351 400 ENSP00000362332/1-442 NVTLLTSLVE GEAVHLARDF GYVCETEFPA KAAAEYLCRQ HADPGELHSR ENSBTAP00000002546/1-442 NVTLLTSLVE GEAVHLARDF GYVCETEFPA KAAAEYLCRQ HADPGELHGR BACU009661/1-497 NVTLLTSLVE GEAVHLARDF GYVCETEFPA KAAAEYLCRQ HADPGELHSR ENSTTRP00000006867/1-439 NVTLLTSLV- -EAVHLARDF GYVCETEFPA KAAAEYLCRQ HADPGELHSR bmy_08889T0/1-259 NVTLLTSLVE GEAVHLARDF GYVCETEFPA KAAAEYLCRQ HADPGELHSR 401 450 ENSP00000362332/1-442 KSMLLAAKQI CKEFADLMAQ DRSPLGNSRP ALILEPGVQS CLTHFSLITH ENSBTAP00000002546/1-442 KSMLLAAKQI CKEFADLMAQ DRSPLGNTRP ALILEPGVQS CLTHFSLITH BACU009661/1-497 KSMLLAAKQI CKEFADLMAQ DRSPLGTTRP ALILEPGVQS CLTHFSLITH ENSTTRP00000006867/1-439 KSMLLAAKQI CKEFADLMAQ DRSPLGNTRP ALILEPGVQS CLTHFSLITH bmy_08889T0/1-259 KSMLLAAKQI CKEFADLMAQ DRSPLGNTRP ALILEPGVQS CLTHFSLMTH 451 500 ENSP00000362332/1-442 GFGGPAICAA LTAFQNYLLE SLKGLDKMFL SSVGSGHGET KASEKDAKHR ENSBTAP00000002546/1-442 GFGGPAICAA LNAFQNYLLE SLKGLDKMFL SSAGSGHGDT KASEKDAKHR BACU009661/1-497 GFGGPAICAA LTAFQNYLLE SLKGLDKMFL SSAGSGHGDT KASEKEAKHR ENSTTRP00000006867/1-439 GFGGPAICAA LTAFQNYLLE SLKGLDKMFL SSAGSGHGDT KASEKDAKLR bmy_08889T0/1-259 GFGGPAICAA LTAFQNYLLE SLKGLDKMFL SSAGSGHGDT KASEKDAKHR 501 550 ENSP00000362332/1-442 K ENSBTAP00000002546/1-442 K BACU009661/1-497 K ENSTTRP00000006867/1-439 K bmy_08889T0/1-259 K