KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:26 2014 Check: 00 .. Name: ENSP00000261413/1-414 Len: 419 Check: 3947 Weight: 1.00 Name: ENSBTAP00000002549/1-415 Len: 419 Check: 3027 Weight: 1.00 Name: bmy_13419T0/1-345 Len: 419 Check: 8087 Weight: 1.00 Name: ENSTTRP00000011227/1-415 Len: 419 Check: 4079 Weight: 1.00 Name: BACU006207/1-329 Len: 419 Check: 1292 Weight: 1.00 // 1 50 ENSP00000261413/1-414 MAASIVRRGM LLARQVVLPQ LSPAGKRYLL SSAYVDSHKW EAREKEHYCL ENSBTAP00000002549/1-415 MAAPMVRRAI LLARNVLLPQ LSLAGKRYLL SAAYEDSRKW EARAKEDCHL bmy_13419T0/1-345 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000011227/1-415 MAVHVVRRGI LWARKVSLPQ LSVTGKRCLL SAAYVDSHKW EAREKEDCHL BACU006207/1-329 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000261413/1-414 ADLASLMDKT FERKLPVSSL TISRLIDNIS SREEIDHAEY YLYKFRHSPN ENSBTAP00000002549/1-415 ADLASLMDKT YERKLPVSSL TISRFVDNIS SREEIDHAEY YLYKFRHSPN bmy_13419T0/1-345 ---------- ---------- --MRMNVNSG AVLERPRQCF PSARFRHSPN ENSTTRP00000011227/1-415 ADLASLMDKT YERKLPVSSL TISRFVDNIS SREEIDHAEY YLYKFRHSPN BACU006207/1-329 ---------- ---------- ---------- -------SSY ALFRFRHSPN 101 150 ENSP00000261413/1-414 CWYLRNWTIH TWIRQCLKYD AQDKALYTLV NKVQYGIFPD NFTFNLLMDS ENSBTAP00000002549/1-415 CWYLRNWTIH TWIRQCLKYG AQDKALYTLV NKVQYGIFPD NYTFNLLMDH bmy_13419T0/1-345 CWYLRDWTIH TWIRQCLKYG AQDKALYTLV NKVQYGIFPD NFTFNLLMDH ENSTTRP00000011227/1-415 CWYLRDWTIH TWIRQCLKYG AEDKALYTLV NKVQYGIFPD NYTFNLLMDH BACU006207/1-329 CWYLRDWTIH TWIRQCLKYG AQDKALYTLV NKVQYGIFPD NFTFNLLMDH 151 200 ENSP00000261413/1-414 FIKKENYKDA LSVVFEVMMQ EAFEVPSTQL LSLYVLFHCL AKKTDFSWEE ENSBTAP00000002549/1-415 FIKKENYKDA LSVVFEIMMQ EAFEVPSTQL LSLYVLYQCL AKKTDFSWEE bmy_13419T0/1-345 FIKEENYKDA LSVVFEIMMQ EAFEVPSTQL LSLYVLYYCL AKKTNFSWEE ENSTTRP00000011227/1-415 FIKEENYKDA LSVVFEIMMQ EAFEVPSTQL LSLYVLYYCL AKKTDFSWEE BACU006207/1-329 FIKEENYKDA LSVVFEIMMQ EAFEVPSTQL LSLYVLYYCL AKKTNFSWEE 201 250 ENSP00000261413/1-414 ERNFGASLLL PGLKQKNSVG FSSQLYGYAL LGKVELQQGL RAVYHNMPLI ENSBTAP00000002549/1-415 ERNFGASLLL PGLKQKNSVG LSSQLYGYAL LGKVELQQGL RAVYHNMPLL bmy_13419T0/1-345 ERNFGASLLL PGLKQKNSVG LSSQLYGYAL LGKVELQQGL RAVYHNMPLL ENSTTRP00000011227/1-415 ERNFGASLLL PGLKQKNSVG LSSQLYGYAL LGKVELQQGL RAVYHNMPLL BACU006207/1-329 ERNFGASLLL PGLKQKNSVG LSSQLYGYAL LGKVELQQGL RAVYHNMPLL 251 300 ENSP00000261413/1-414 WKPGYLDRAL QVMEKVAASP EDIKLCREAL DVLGAVLK-A LTS-ADGASE ENSBTAP00000002549/1-415 WRPGYLDRAL QVMEKVASSP EDGKLCREAL GVLDRALK-A LTAPAQESPE bmy_13419T0/1-345 WQPGYLNRAL QVMEKVASSP EDRKLCREAL DVLDRALKAA LTAPAQGSSE ENSTTRP00000011227/1-415 WQPGYLNRAL QVMEKVASSP EDGKLCREAL DVLDRALKAA VTAPAQGSSE BACU006207/1-329 WQPGYLNRAL QVMEKVASSP EDGKLCREAL DVLDRALKVA LTAPAQGSSE 301 350 ENSP00000261413/1-414 EQSQNDEDNQ GSEKLVEQLD IEETEQSKLP QYLERFKALH SKLQALGKIE ENSBTAP00000002549/1-415 EQPQEGEESP ASEELMEQLD VEETEQSKLP RYVERYEALH SKLQALGKVE bmy_13419T0/1-345 DQPQEGEKTQ RSEELVEQLD VEETEQSKLP RYLERFEALH SKLHALGKVE ENSTTRP00000011227/1-415 DQPQEGEKTQ RSEELVEQLD VEETEQSKLP RYLERFEALH SKLQALGKVE BACU006207/1-329 DQPQEGEKTQ KSEELVEQLD VEETEQSKLP RYLERFEALH SKLHALGKVE 351 400 ENSP00000261413/1-414 SEGLLSLTTQ LVKEKLSTCE AEDIATYEQN LQQWHLDLVQ LIQREQQQRE ENSBTAP00000002549/1-415 SESLLTLTTQ LVKEQLPTCE AEDIATYEQK LQEWHLELVN LIEREKEMRE bmy_13419T0/1-345 SESLLTLTTQ LVKEQLPPCE AEDIAAYEQK LQQWHLDWVH LIQREKEQRA ENSTTRP00000011227/1-415 SKSLLTLTTQ LVKEQLPTC- AEDIAAYEQK LQQWHLDWVH LIQREKEQRE BACU006207/1-329 SESLLTLTTQ LVKEQLPPCE AEDIAAYEQK LQQWHLDWVH LIQREKEQRE 401 450 ENSP00000261413/1-414 QAKQEY---Q AQKAAKASA ENSBTAP00000002549/1-415 KARLKH---E ARRAAKAAA bmy_13419T0/1-345 RAKQEQRLEE QRRHLPN-- ENSTTRP00000011227/1-415 RAKQAQ---E ARRAAEASA BACU006207/1-329 RAKQEQ---A ARRAAKASA