KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:26 2014 Check: 00 .. Name: ENSP00000332656/1-458 Len: 480 Check: 6586 Weight: 1.00 Name: ENSBTAP00000002552/1-459 Len: 480 Check: 6136 Weight: 1.00 Name: ENSTTRP00000014641/1-442 Len: 480 Check: 1096 Weight: 1.00 Name: bmy_02290T0/1-480 Len: 480 Check: 550 Weight: 1.00 Name: BACU011582/1-457 Len: 480 Check: 7945 Weight: 1.00 // 1 50 ENSP00000332656/1-458 MRGLAVLLTV ALATLLAPGA GAPVQSQGSQ NKLLLVSFDG FRWNYDQDVD ENSBTAP00000002552/1-459 MGAPAVFLAV ALATLLAPAS GAPVRQQASR NKLLLVSFDG FRWNYDQDVD ENSTTRP00000014641/1-442 MRSPAVLLAV ALATLLAPAS GAPIQRQGSR NKLLLVSFDG FRWDYDQDVH bmy_02290T0/1-480 MGSPAVLLAV ALATLLVPAS GAPIRGQGSR NKLLLVTFDG FRWNYDRDVH BACU011582/1-457 MGSPAVLLAV ALATLLVPAS GAPIRGQGSR NKLLLVSFDG FRWNYDQDVH 51 100 ENSP00000332656/1-458 TPNLDAMARD GVKARYMTPA FVTMTSPCHF TLVTGKYIEN HGVVHNMYYN ENSBTAP00000002552/1-459 TPNLDAMALD GVKARYMTPA FITLTSPCHF TLVTGKYVEN HGVVHNMFYN ENSTTRP00000014641/1-442 TPSLDAMALD GVRARYMTPA FVTMTSPCHF TLVTGKYIEN HGVVHNMFYN bmy_02290T0/1-480 TPNLDAMALD GVKARYMTPA FVTMTSPCHF TLVTGKYIEN HGVVHNMFYN BACU011582/1-457 TPNLDAMALD GVKARYMTPA FVTMTSPCHF TLVTGKYIEN HGVVHNMFYN 101 150 ENSP00000332656/1-458 TTSKVKLPYH ATLGIQRWWD NGSVPIWITA QRQGLRAGSF FYPGGNVTYQ ENSBTAP00000002552/1-459 TSSKVKWPYH TTLGIQKWWD NGSLPIWITA QRQGLKTGSF FYPGGNVTYQ ENSTTRP00000014641/1-442 TSSKVKLPYH ATLGIQTWWD NGSLPIWITA QRQGLKTGSF FYPGGNVTYQ bmy_02290T0/1-480 TSSKVKLPYH ATLGIQRWWD NGSLPIWITA QRQGLKTGSF FYPGGNVTYQ BACU011582/1-457 TSSKVKLPYH ATLGIQRWWD NGSLPIWITA QRQGLKTGSF FYPGGNVTYQ 151 200 ENSP00000332656/1-458 GVAVTRSRKE GIAHNYKNET EWRANIDTVM AWFTEEDLDL VTLYFGEPDS ENSBTAP00000002552/1-459 GEAVTLSRKE GILHNFKDEA EWRANIDTVM TWFTDEGLDL VTLYFGEPDS ENSTTRP00000014641/1-442 GEAVTLSRKE GILHNYKDEK EWRANIDTVM KWFTDEGLDL VTLYFGEPDS bmy_02290T0/1-480 GEAVTLSRKE GVLHNYKDEV EWRANIDTVM KWFTDEGLDL VTLYFGEPDS BACU011582/1-457 GEAVTLSRKE GVLHNYKDEV EWRANIDTVM KWFTDEGLDL VTLYFGEPDS 201 250 ENSP00000332656/1-458 TGHRYGPESP ERREMVRQVD RTVGYLRESI ARNHLTDRLN LIITSDHGMT ENSBTAP00000002552/1-459 TGHRYGPESQ ERKEIVMQVD RTVGYLRDSI RKSGLESSLN LLILSDHGMT ENSTTRP00000014641/1-442 TGHKYGPESQ QRKDMVRQVD RTVGYLRDSI RKSSLEGSLN LIIVSDHGMS bmy_02290T0/1-480 TGHKYGPESQ QRKEMVMQVD RTVGYLRDSI RXSGLESSLN LIIVSDHGMS BACU011582/1-457 TGHKYGPESQ QRKEMVMQVD RTVGYLRDSI RNSGLESSLN LIIVSDHGMS 251 300 ENSP00000332656/1-458 TVDKRAGDLV EFHKFPNFTF RDIEFELLDY GPNGMLLPKE GRLEKVYDAL ENSBTAP00000002552/1-459 TVNKTASDLV EFHKFSNFSF KDIEFELLDY GPNGMLLPKE GMLEKVYEAL ENSTTRP00000014641/1-442 TVNKKASDLV EFHKIANFTF KDIEFELLDY GPNGMLLPKE GKLEKVYQVL bmy_02290T0/1-480 TVNKKASDLV EFHKIANFTF KDIEFELLDY GPNGMLLPKE GRLEKVYEVL BACU011582/1-457 TINKTASDLV EFHKIANFTF KDIEFELLDY GPNGMLLPKE GRLEKVYEVL 301 350 ENSP00000332656/1-458 KDAHPKLHVY KKEAFPEAFH YANNPRVTPL LMYSDLGYVI HGRINVQFNN ENSBTAP00000002552/1-459 KDAHPRLHVY KKEFFPKSFH YANHSRITPL LMYSDPGYVI HGRVNVQFNN ENSTTRP00000014641/1-442 KDAHPRLHVY KKELFPKSFH YASHPRVTPL LMYSDPGYVI HGRVNVQFNK bmy_02290T0/1-480 KDAHPRLHVY KKELFPKSFH YANHPRVTPL LMYSDLGYVI HGRLSVQFNN BACU011582/1-457 KDAHPRLHVY KKELFPKSFH YANHPRVTPL LMYSDLGYVI HGRLSVQFNN 351 400 ENSP00000332656/1-458 GEHGFDNKDM DMKTIFRAVG PSFRAGLEVE PFESVHVYEL MCRLLGIVPE ENSBTAP00000002552/1-459 GEHGFDNEVM DMKTIFRAVG PSFKKGLEVE PFESVHVYEL MCKLLGIVPE ENSTTRP00000014641/1-442 GEHGFDNSVM DMKTIFRAVG PSFKRGLEVE PFESIHVYEL MCKLLGIVPE bmy_02290T0/1-480 GEHGFDNNIM DMKTIFRAVG PSFKRGLEVE PFESIHVYEL MCRLLGIVPE BACU011582/1-457 GEHGFDNSIM DMKTIFRAVG PSFKRGLEVE PFESIHVYEL MCRVLGIVPE 401 450 ENSP00000332656/1-458 ANDGHLATLL PMLHTES--- -----ALPPD G--RPTLLPK GRSALPPSSR ENSBTAP00000002552/1-459 ANDGLLSTLL PILQET---- -----TTTPS GGLGTLRLPL KRSALLPSGW ENSTTRP00000014641/1-442 ANDGALSTLL PTL------- --------SA G--------- --SALLPRSW bmy_02290T0/1-480 ANDGLLSTLL PTLREAGDGV FSTPLTTTPS GAPLPSTCTH CASRQLQNGP BACU011582/1-457 ANDGLLSTLL PTLQEAGDGV FSTPLTTTPS G--------- --SALLPSSW 451 500 ENSP00000332656/1-458 ----PLLVMG L--------L GTVILLSEVA ENSBTAP00000002552/1-459 ----PPLVTG L--------L VAATLLVEVA ENSTTRP00000014641/1-442 ----PPLVTG L--------L VAAVLLVKVA bmy_02290T0/1-480 MRVPPSVATG AGVCREPARE GAAVLVVVEL BACU011582/1-457 ----PPLVTG L--------L VAAFLLVKVA