KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 4  Type: P  Thu May 15 16:18:27 2014  Check: 00 ..

 Name: ENSBTAP00000002563/1-157  Len:    157  Check:  2315  Weight:  1.00
 Name: ENSP00000340125/1-155     Len:    157  Check:  3885  Weight:  1.00
 Name: bmy_18727T0/1-152         Len:    157  Check:  6266  Weight:  1.00
 Name: ENSTTRP00000000331/1-154  Len:    157  Check:  2257  Weight:  1.00

//


                          1                                                   50
ENSBTAP00000002563/1-157  MMSTEQMQPL ELSEDRLDKL DPRCSHLESD DLSDQFIKDC DLKKKPIKGK 
ENSP00000340125/1-155     MMSTEQMQPL ELSEDRLDKL DPRCSHL--D DLSDQFIKDC DLKKKPRKGK 
bmy_18727T0/1-152         MMSTEQMQPL ELSEDRLDKR DPRCGHL--D DLSDQFFKDC DLKKKPRKGK 
ENSTTRP00000000331/1-154  MMSTEQMQPL ELSEDRLDKL DPRCGHL--Y DLSDQFIKDC ELKKKPRKGK 


                          51                                                 100
ENSBTAP00000002563/1-157  NVQVTLNVES DQKKPRRKDT PALHVPPFIP DVLSEHLITR YDVQDIQPKG 
ENSP00000340125/1-155     NVQATLNVES DQKKPRRKDT PALHIPPFIP GVFSEHLIKR YDVQERHPKG 
bmy_18727T0/1-152         NVQVTLNVES DQKKPRRKDT PALHIPPFIP GVLSEHLIKR YDVQERHPKG 
ENSTTRP00000000331/1-154  NVQVTLNVES DQKKPRRKDT PALHIPPFIP GVLSEHLIKR YDVQERHPKG 


                          101                                                150
ENSBTAP00000002563/1-157  KMSPVLHNTD LEQKKPRRKD TPALHVSPFA AGVTLLRDER PKVIVEDDEK 
ENSP00000340125/1-155     KMIPVLHNTD LEQKKPRRKD TPALHMSPFA AGVTLLRDER PKAIVEDDEK 
bmy_18727T0/1-152         KMSPALHNTD LEQKKPRRKD TPALHVSPFA AGVTLLRDER PKVIMEDDEK 
ENSTTRP00000000331/1-154  KMSPALHNTD LEQKKPRRKD TPALHVSPFA AGVTLLRDER PKVIMEDDEK 


                          151                                                200
ENSBTAP00000002563/1-157  DGDKIAI 
ENSP00000340125/1-155     DGDKIAI 
bmy_18727T0/1-152         DGDK--- 
ENSTTRP00000000331/1-154  DGD-IAI