KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:28 2014 Check: 00 .. Name: ENSTTRP00000012112/1-937 Len: 970 Check: 1708 Weight: 1.00 Name: bmy_10080T0/1-818 Len: 970 Check: 1880 Weight: 1.00 Name: ENSP00000378635/1-957 Len: 970 Check: 2999 Weight: 1.00 Name: ENSBTAP00000002564/1-960 Len: 970 Check: 1558 Weight: 1.00 Name: BACU009099/1-762 Len: 970 Check: 5164 Weight: 1.00 // 1 50 ENSTTRP00000012112/1-937 MQPMVMQGCP YTLPRCHEWR AADHFHHSSS LRSTCPQPQV RAAASTPAPP bmy_10080T0/1-818 MQPMVMQGCP YTLPRCHEWR AADHFHHSSS LRSTCPQPQ- ---------- ENSP00000378635/1-957 MQPMVMQGCP YTLPRCHDWQ AADQFHHSSS LRSTCPHPQV RAAVTSPAPP ENSBTAP00000002564/1-960 MQPMVMQGCP YTLPRCHKWR EADNFHHSRS LRSTCPQPQV RAAAATPAPP BACU009099/1-762 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000012112/1-937 HDGAGVPYLS PKLFNGSVGA AGPLEPPAMN LCWNEIKKKS HSLRARLEAF bmy_10080T0/1-818 ---------- ---------- NQPFSPSVHT -C-------- ---------- ENSP00000378635/1-957 QDGAGVPCLS LKLLNGSVGA SGPLEPPAMN LCWNEIKKKS HNLRARLEAF ENSBTAP00000002564/1-960 HNGAGVPCLS PKLFNGSVVA ARTLEPPAMN LCWNEIKKKS HNLRARLEAF BACU009099/1-762 ---------- ---------- --------MN LCWNEIKKKS HSLRARLEAF 101 150 ENSTTRP00000012112/1-937 SDHSGKLQLP LQEIIDWLSQ KDEELSAQLP LQGDVALVQQ EKETHAXXXX bmy_10080T0/1-818 -PTLGLVQTR V-----WHTP GITEVSVFLS RLE--LLPPP LRLLTMAFME ENSP00000378635/1-957 SDHSGKLQLP LQEIIDWLSQ KDEELSAQLP LQGDVALVQQ EKETHAAFME ENSBTAP00000002564/1-960 SDHSGKLQLP LQEIIDWLSQ KDEELSAQLP LQGDVVLVQQ EKETHAAFME BACU009099/1-762 SDHSGKLQLP LQEIIDWLSQ KDEELSAQLP LQGDVALVQQ EKETHAAFME 151 200 ENSTTRP00000012112/1-937 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXTSP RQRIQNLSRF bmy_10080T0/1-818 DVKSRGPYIY SVLESAQAFL SRHPFDELED PRSESKDTSP RQRIQNLSRF ENSP00000378635/1-957 EVKSRGPYIY SVLESAQAFL SQHPFEELEE PHSESKDTSP KQRIQNLSRF ENSBTAP00000002564/1-960 DVKSRGPYIY SVLESAQAFL SQHPFDELEE PRSESKDTSP RQRIQNLSRF BACU009099/1-762 DVKSRGPYIY SVLESAQAFL SQHPFDELEE PRSESKDTSP RQRIQNLSRF 201 250 ENSTTRP00000012112/1-937 VWKQATVASE LWEKLTARCV DQHRHIERTL EQLLEIQGAM EELSATLTQA bmy_10080T0/1-818 VWKQATVASE LWEKLTARCV DQHRHIERTL EQLLEIQGAM EELSATLTQA ENSP00000378635/1-957 VWKQATVASE LWEKLTARCV DQHRHIERTL EQLLEIQGAM EELSTTLSQA ENSBTAP00000002564/1-960 VWKQATVASE LWEKLTARCV DQHRHIERTL EQLLEIQGAM EELNATLTQA BACU009099/1-762 VWKQATVASE LWEGLTARCV DQHRHIERTL EQLLEIQGAM EELSATLTQA 251 300 ENSTTRP00000012112/1-937 EGVRATWEPI GDLFIDSLPE HIQALKLFKE EFFPMKDGVK LVNDLAHQLA bmy_10080T0/1-818 EGVRATWEPI GDLFIDSLPE HIQALKLFKE EFFPMKDGVK LVNDLAHQLA ENSP00000378635/1-957 EGVRATWEPI GDLFIDSLPE HIQAIKLFKE EFSPMKDGVK LVNDLAHQLA ENSBTAP00000002564/1-960 EGVRATWEPI GDLFIDSLPE HIQALKLFKE EFSPMKDGVK LVNDLAHQLA BACU009099/1-762 EGVRATWEPI GDLFIDSLPE HIQALKLFKE EFFPMKDGEK LVNDLAHQLA 301 350 ENSTTRP00000012112/1-937 ISDVHLSMEN SRALEQINIR WKQLQVSVGE RLKQLQDAHR DFGPGSQHFL bmy_10080T0/1-818 ISDVHLSMEN SRALEQINIR WKQLQVSVGE RLKQLQDAHR DFGPGSQHFL ENSP00000378635/1-957 ISDVHLSMEN SQALEQINVR WKQLQASVSE RLKQLQDAHR DFGPGSQHFL ENSBTAP00000002564/1-960 ISDVHLSMEN SRALEQINIR WKQLQVSVGE RLKQLQDAHR DFGPGSQHFL BACU009099/1-762 ISDVHLSMEN SRALEQINIR WKQLQVSVGE RLKQLQDAHR DFGPGSQHFL 351 400 ENSTTRP00000012112/1-937 SSSVQVPWER AISPNKVPYY INHQAQTTCW DHPKMTELYQ TL-ADLNNIK bmy_10080T0/1-818 S--------- ---------- ---------- ---------- ---------- ENSP00000378635/1-957 SSSVQVPWER AISPNKVPYY INHQAQTTCW DHPKMTELYQ TL-ADLNNIK ENSBTAP00000002564/1-960 SSSVQVPWER AISPNKVPYY INHQAQTTCW DHPKMTELYQ TLAADLNNIK BACU009099/1-762 S--------- ---------- ---------- ---------- ---------- 401 450 ENSTTRP00000012112/1-937 FSAYRTAMKL RRVQKALRLD LVTLTTALEI FNEHDLQASE HVMDVVEVIH bmy_10080T0/1-818 ---------- --------LD LVTLTTALEI FNEHDLQASE HVMDVVEVIH ENSP00000378635/1-957 FSAYRTAMKL RRVQKALRLD LVTLTTALEI FNEHDLQASE HVMDVVEVIH ENSBTAP00000002564/1-960 FSAYRTAMKL RRVQKALRLD LVTLTTALEI FNEHDLQASE HVMDVVEVIH BACU009099/1-762 ---------- --------LD LVTLTTALEI FNEHDLQASE HVMDVVEVIH 451 500 ENSTTRP00000012112/1-937 CLTALYERLE EERGILVNVP LCVDMSLNWL LNVFD--SGR SGKMRALSFK bmy_10080T0/1-818 CLTALYERLE EERGILVNVP LCVDMSLNWL LNVFD--SGR SGKMRALSFK ENSP00000378635/1-957 CLTALYERLE EERGILVNVP LCVDMSLNWL LNVFD--SGR SGKMRALSFK ENSBTAP00000002564/1-960 CLTALYERLE EERGILVNVP LCVDMSLNWL LNVFDRPSGR SGKMRALSFK BACU009099/1-762 CLTALYERLE EERGILVNVP LCVDMSLNWL LNVFD--SGR SGKMRALSFK 501 550 ENSTTRP00000012112/1-937 TGIACLCGTE VKEKLQY--- -------LFS QVANSGSQCD QRHLGVLLHE bmy_10080T0/1-818 TGIACLCGTE VKEKLQCEYN SKVW--NLFS QVANSGSQCD QRHLGVLLHE ENSP00000378635/1-957 TGIACLCGTE VKEKLQY--- -------LFS QVANSGSQCD QRHLGVLLHE ENSBTAP00000002564/1-960 TGIACLCGTE VKEKLQY--- -------LFS QVANSGSQCD QRHLGVLLHE BACU009099/1-762 TGIACLCGTE VKEKLQCEYN SKVWSRDLFS QVANSGSQCD QRHLGVLLHE 551 600 ENSTTRP00000012112/1-937 AIQVPRQLGE VAAFGGSNVE PSVRSCFRFS TGKPVIEVAQ FLEWVNLEPQ bmy_10080T0/1-818 AIQVPRQLGE VAAFGGSNVE PSVRSCFRFS TGKPVIEASQ FLEWVNLEPQ ENSP00000378635/1-957 AIQVPRQLGE VAAFGGSNVE PSVRSCFRFS TGKPVIEASQ FLEWVNLEPQ ENSBTAP00000002564/1-960 AIQVPRQLGE VAAFGGSNVE PSVRSCFRFS TGKPVIEASQ FLEWVNLEPQ BACU009099/1-762 AIQVPRQLGE VAAFGGSNVE PSVRSCFRFS TGKPVIEASQ FLEWVNLEPQ 601 650 ENSTTRP00000012112/1-937 SMVWLAVLHR VTIAEQVKHQ TKCSICRQCP IKGFRYRSLK QFNVDICQTC bmy_10080T0/1-818 SMVWLAVLHR VTIAEQVKHQ TKCSICRQCP IKGFRYRSLK QFNVDICQTC ENSP00000378635/1-957 SMVWLAVLHR VTIAEQVKHQ TKCSICRQCP IKGFRYRSLK QFNVDICQTC ENSBTAP00000002564/1-960 SMVWLAVLHR VTIAEQVKHQ TKCSICRQCP IKGFRYRSLK QFNVDICQTC BACU009099/1-762 SMVWLAVLHR VTIAEQVKHQ TK-------- -----YRSLK QFNVDICQTC 651 700 ENSTTRP00000012112/1-937 FLTGRASKGN KLHYPIMEYY TPTTSSENMR DFATTLKNKF RSKHYFSKHP bmy_10080T0/1-818 FLTGRASKGN KLHYPIMEYY TPTTSSENMR DFATTLKNKF RSKHYFSKHP ENSP00000378635/1-957 FLTGRASKGN KLHYPIMEYY TPTTSSENMR DFATTLKNKF RSKHYFSKHP ENSBTAP00000002564/1-960 FLTGRASKGN KLHYPIMEYY TPTTSSENMR DFATTLKNKF RSKHYFSKHP BACU009099/1-762 FLTGRASKGN KLHYPIMEYY TPTTSSENMR DFATTLKNKF RSKHYFSKHP 701 750 ENSTTRP00000012112/1-937 QRGYLPVQSV LEADYSETPA SSPMLPHADT HSRIEHFAS- ---------- bmy_10080T0/1-818 QRGYLPVQSV LEADYSETPA SSPMLPHADT HSRIEHFASR LAEMESQNCS ENSP00000378635/1-957 QRGYLPVQSV LEADYSETPA SSPMWPHADT HSRIEHFASR LAEMESQNCS ENSBTAP00000002564/1-960 QRGYLPVQSV LEADYNETPA SSPMLPHADT HSRIEHFASR LAEMESQNCS BACU009099/1-762 QRGYLPVQSV LEADYSETPA SSPMLPHADT HSRIEHFASR LAEMESQNCS 751 800 ENSTTRP00000012112/1-937 ---------D ESDEDQYLLR HSSPITDREP AFGQQAPCSM ATESKGELEK bmy_10080T0/1-818 FFNDSLSPDD SIDEDQYLLR HSSPITDREP AFGQQAP--- ---------- ENSP00000378635/1-957 FFNDSLSPDD SIDEDQYLLR HSSPITDREP AFGQQAPCSV ATESKGELQK ENSBTAP00000002564/1-960 FFNDSLSPDD SIDEDQYLLR HSSPVTDREP AFRQQAPHNM ATGSKGELEK BACU009099/1-762 FFNDSLSPDD SM-------- ---------- ---------- ---------- 801 850 ENSTTRP00000012112/1-937 ILAHLEDEKR ILQGELRRLK WQHEEAAEAP TLAEGSAEVA QDHRNEELLA bmy_10080T0/1-818 ---------- ILQGELRRLK WQHEEAAEAP TLAEGSAEVA QDHRNEELLA ENSP00000378635/1-957 ILAHLEDENR ILQGELRRLK WQHEEAAEAP SLADGSTEAA TDHRNEELLA ENSBTAP00000002564/1-960 ILAHLEDENR ILQGELRRLK WQHEEATEVP ALTEGSAEVA QGHCNEELLA BACU009099/1-762 ---------- ILQGELRRLK WQQEEAAEAP TLAEGSAEVA QDHRNEELLA 851 900 ENSTTRP00000012112/1-937 EARILRQHKS RLETRMQILE DHNKQLESQL QRLRELLLQP HTESDGNGSA bmy_10080T0/1-818 EARILRQHKS RLETRMQILE DHNKQLESQL QRLRELLLQP HTESDGNGSA ENSP00000378635/1-957 EARILRQHKS RLETRMQILE DHNKQLESQL QRLRELLLQP PTESDGSGSA ENSBTAP00000002564/1-960 EARILRQHKS RLETRMQILE DHNKQLESQL QRLRELLLQP PIESNGNGSA BACU009099/1-762 EARILRQHKS RLETRMQILE DHNKQLESQL QRLRELLLQP HTESDGNGSA 901 950 ENSTTRP00000012112/1-937 GSSLASSPQQ SEGSHPQEKG QTTPDTQAAD DVGSKSQDVS LCLEDIMEKL bmy_10080T0/1-818 GSSLASSPQQ SEGSHPQEKG QTTPDTQAAD DVGSKSQDVS LCLEDIMEKL ENSP00000378635/1-957 GSSLASSPQQ SEGSHPREKG QTTPDTEAAD DVGSKSQDVS LCLEDIMEKL ENSBTAP00000002564/1-960 GSSLASSPQQ SEGSHPQEKG QTTPDTEAAD DVGLKSQDVS LCLEDIMEKL BACU009099/1-762 GSSLASSPQQ SEGSHPQEKG QTTPDTQAAD DVGSKSQDVS LCLEDIMEKL 951 1000 ENSTTRP00000012112/1-937 RHAFPSVRSS DVTTNTLLAS bmy_10080T0/1-818 RHAFPSVRSS DVTTNTLLAS ENSP00000378635/1-957 RHAFPSVRSS DVTANTLLAS ENSBTAP00000002564/1-960 RHAFPSVRSS DVTANTLLAS BACU009099/1-762 RHAFPSVRSS DVTTNTLLAS