KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:29 2014 Check: 00 .. Name: ENSBTAP00000002571/1-727 Len: 734 Check: 4172 Weight: 1.00 Name: ENSP00000330199/1-727 Len: 734 Check: 4166 Weight: 1.00 Name: BACU002728/1-717 Len: 734 Check: 2901 Weight: 1.00 Name: bmy_11928T0/1-436 Len: 734 Check: 1139 Weight: 1.00 Name: ENSTTRP00000001233/1-723 Len: 734 Check: 5755 Weight: 1.00 // 1 50 ENSBTAP00000002571/1-727 MPKNSKVTQR EHSNEHVTES VADLLALEEP VDYKQSVLNV AGEAGGKQKA ENSP00000330199/1-727 MPKNSKVTQR EHSSEHVTES VADLLALEEP VDYKQSVLNV AGEAGGKQKA BACU002728/1-717 MPKNSKVTQR EHSSEHVTES VADLLALEEP VDYKQSILNV AGEAGGKQKV bmy_11928T0/1-436 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001233/1-723 MPKNSKVTQR EHSSEHVTES VADLLALEEP VDYKQSILNV AGEAGGKQKV 51 100 ENSBTAP00000002571/1-727 AEEELDAEDR PAWNSKLQYI LAQIGFSVGL GNIWRFPYLC QKNGGGAYLV ENSP00000330199/1-727 VEEELDAEDR PAWNSKLQYI LAQIGFSVGL GNIWRFPYLC QKNGGGAYLV BACU002728/1-717 AEGELDVEDR PAWNSKLQYI LAQIGFSVGL GNIWRFPYLC QKNGGGAYLV bmy_11928T0/1-436 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001233/1-723 A----DVEDR PAWNSKLQYI LAQIGFSVGL GNIWRFPYLC QKNGGGAYLV 101 150 ENSBTAP00000002571/1-727 PYLVLLIIIG IPLFFLELAV GQRIRRGSIG VWHYVCPRLG GIGFSSCIVC ENSP00000330199/1-727 PYLVLLIIIG IPLFFLELAV GQRIRRGSIG VWHYICPRLG GIGFSSCIVC BACU002728/1-717 PYLVLLIIIG IPLFFLELAV GQRIRRGSIG VWHYVCPRLG GIGFSSCIVC bmy_11928T0/1-436 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001233/1-723 PYLVLLIIIG IPLFFLELAV GQRIRRGSIG VWHYVCPRLG GIGFSSCIVC 151 200 ENSBTAP00000002571/1-727 LFVGLYYNVI IGWSIFYFFK SFQYPLPWSE CPVSRNGTVA VVEAECEKSS ENSP00000330199/1-727 LFVGLYYNVI IGWSIFYFFK SFQYPLPWSE CPVVRNGSVA VVEAECEKSS BACU002728/1-717 LFVGLYYNVI IGWSIFYFFK SFQYPLPW-- ---------- MVEPECEKSS bmy_11928T0/1-436 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001233/1-723 LFVGLYYNVI IGWSIFYFFK SFQYPLPWSE CPVARNGTAA VVEPECEKSS 201 250 ENSBTAP00000002571/1-727 ATTYFWYREA LDISNSISES GGLNWKMTLC LLVAWSIVGM AVVKGIQSSG ENSP00000330199/1-727 ATTYFWYREA LDISDSISES GGLNWKMTLC LLVAWSIVGM AVVKGIQSSG BACU002728/1-717 ATTYFWYREA LDISNSISES GGLNWKMTLC LLVAWSIVGM AVVKGIQSSG bmy_11928T0/1-436 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000001233/1-723 ATTYFWYREA LDISNSISES GGLNWKMTLC LLVAWGIVGM AVVKGIQSSG 251 300 ENSBTAP00000002571/1-727 KVMYFSSLF- ------PYVV LACFLVRGLL LRGAIDGILH MFTPKLDKML ENSP00000330199/1-727 KVMYFSSLF- ------PYVV LACFLVRGLL LRGAVDGILH MFTPKLDKML BACU002728/1-717 KVMYFSSLFP YFSSLYPYVV LACFLVLGLL LRGAVDGILH MFTPKLDKML bmy_11928T0/1-436 ---------- ---------- ---------- ---------- --------ML ENSTTRP00000001233/1-723 KVMYFSSLF- ------PYVV LACFLVRGLL LRGAVDGILH MFTPKLDKML 301 350 ENSBTAP00000002571/1-727 DPQVWREAAT QVFFALGLGF GGVIAFSSYN KQDNNCHFDA ALVSFINFFT ENSP00000330199/1-727 DPQVWREAAT QVFFALGLGF GGVIAFSSYN KQDNNCHFDA ALVSFINFFT BACU002728/1-717 DPQVWREAAT QVFFALGLGF GGVIAFSSYN KQDNNCHFDA ALVSFINFFT bmy_11928T0/1-436 DPQVWREAAT QVFFALGLGF GGVIAFSSYN KQDNNCHFDA ALVSFINFFT ENSTTRP00000001233/1-723 DPQVWREAAT QVFFALGLGF GGVIAFSSYN KQDNNCHFDA ALVSFINFFT 351 400 ENSBTAP00000002571/1-727 SVLATLVVFA VLGFKANIMN EKCVVENAEK ILGYLNNDVL SRALIPPHVN ENSP00000330199/1-727 SVLATLVVFA VLGFKANIMN EKCVVENAEK ILGYLNTNVL SRDLIPPHVN BACU002728/1-717 SVLATLVVFA VLGFKANIMN EKCV-----K ILGYLNTDVL SRALIPPHVN bmy_11928T0/1-436 SVLATLVVFA VLGFKANIMN EKCVVENAEK ILGYLNTDVL SRALIPPHVN ENSTTRP00000001233/1-723 SVLATLVVFA VLGFKANIMN EKCVVENAEK ILGYLNTDVL SRALIPPHVN 401 450 ENSBTAP00000002571/1-727 FSHLTTKDYA EMYKVIKTVK EDHFSALGLD PCLLEDELDK SVQGTGLAFI ENSP00000330199/1-727 FSHLTTKDYM EMYNVIMTVK EDQFSALGLD PCLLEDELDK SVQGTGLAFI BACU002728/1-717 FSHLTTKDYA EMYKVIKTVK EDHFSALGLD PCLLEDELDK SVQGTGLAFI bmy_11928T0/1-436 FSHLTTKDYA EMYKVIKTVK EDHFSALGLD PCLLEDELDK SVQGTGLAFI ENSTTRP00000001233/1-723 FSHLTTKDYA EMYKVIKTVK EDHFSALGLD PCLLEDELDK SVQGTGLAFI 451 500 ENSBTAP00000002571/1-727 AFTEAMTHFP ASPFWSVMFF LMLINLGLGS MIGTMAGITT PIIDTFKVPK ENSP00000330199/1-727 AFTEAMTHFP ASPFWSVMFF LMLINLGLGS MIGTMAGITT PIIDTFKVPK BACU002728/1-717 AFTEAMTHFP ASPFWSVMFF LMLINLGLGS MIGTMAGITT PIIDTFKVPK bmy_11928T0/1-436 AFTEAMTHFP ASPFWSVMFF LMLINLGLGS MIGTMAGITT PIIDTFKVPK ENSTTRP00000001233/1-723 AFTEAMTHFP ASPFWSVMFF LMLINLGLGS MIGTMAGITT PIIDTFKVPK 501 550 ENSBTAP00000002571/1-727 EMFTVGCCVF AFFVGLLFVQ RSGNYFVTMF DDYSATLPLT VIVILENVAV ENSP00000330199/1-727 EMFTVGCCVF AFLVGLLFVQ RSGNYFVTMF DDYSATLPLT LIVILENIAV BACU002728/1-717 EMFTVGCCVF AFFVGLLFVQ RSGNYFVTMF DDYSATLPLT VIVILENVAV bmy_11928T0/1-436 EMFTVGCCVF AFFVGLLFVQ RSGNYFVTMF DDYSATLPLT VIVILENVAV ENSTTRP00000001233/1-723 EMFTVGCCVF AFFVGLLFVQ RSGNYFVTMF DDYSATLPLT VIVILENVAV 551 600 ENSBTAP00000002571/1-727 AWIYGTKKFM QELTEMLGFQ PYRFYFYMWK FVSPLCMAVL TTASIIQLGV ENSP00000330199/1-727 AWIYGTKKFM QELTEMLGFR PYRFYFYMWK FVSPLCMAVL TTASIIQLGV BACU002728/1-717 AWIYGTKKFM QELTEMLGFR PYRFYFYMWK FVSPLCMAVL TTASIIQLGV bmy_11928T0/1-436 AWIYGTKKFM QELTEMLGFR PYRFYFYMWK FVSPLCMAVL TTASIIQLGV ENSTTRP00000001233/1-723 AWIYGTKKFM QELTEMLGFQ PYRFYFYMWK FVSPLCMAVL TTASIIQLGV 601 650 ENSBTAP00000002571/1-727 TPPGYSAWIR EEPAQLYTSI ETWGGSALSQ XIVVAVLPIP VVFVLRHFHL ENSP00000330199/1-727 TPPGYSAWIK EEAAERYLYF PNWAMALLIT LIVVATLPIP VVFVLRHFHL BACU002728/1-717 TPPGYSAWIK EEAAERYLYF PNWAMALLIT LIVVAVLPIP VVFVLRHFHL bmy_11928T0/1-436 TPPGYSAWIK EEAAERYLYF PNWAMALLIT LIVVAVLPIP VVFVLRHFHL ENSTTRP00000001233/1-723 TPPGYSAWIK EEAAERYLYF PNWAMALLIT LIVVAVLPIP VVFVLRHFHL 651 700 ENSBTAP00000002571/1-727 LSDGSNTLSV SYKKGRMMKD ISNLEENDET RFILSKVPSE APSPMPTHRS ENSP00000330199/1-727 LSDGSNTLSV SYKKGRMMKD ISNLEENDET RFILSKVPSE APSPMPTHRS BACU002728/1-717 LSDGSNTLSV SYKKGRMMKD ISNLEENDET RFILSKVPSE APSPMPTHRS bmy_11928T0/1-436 LSDGSNTLSV SYKKGRMMKD ISNLEENDET RFILSKVPSE APSPMPTHRS ENSTTRP00000001233/1-723 LSDGSNTLSV SYKKGRMMKD ISNLEENDET RFILSKVPSE APSPMPTHRS 701 750 ENSBTAP00000002571/1-727 YLGPGSTSPL ETSGNPNGRY GSGYLLAGTP ESEL ENSP00000330199/1-727 YLGPGSTSPL ETSGNPNGRY GSGYLLASTP ESEL BACU002728/1-717 YLGPGSTSPL ETSGNPNGHY GSGYLLASTP ESEL bmy_11928T0/1-436 YLGPGSTSPL ETSGNPNGRY GSGYLLASTP ESEL ENSTTRP00000001233/1-723 YLGPGSTSPL ETSGNPNGRY GSGYLLASTP ESEL