KEY:
ENSP* - Homo sapiens (Human)
ENSBTA* - Bos taurus (Cow)
ENSTTR* - Tursiops truncatus (Dolphin)
bmy_* - Balaena mysticetus (Bowhead whale)
BACU* - Balaenoptera acutorostrata (Minke whale)
Copy from below the line for a valid .msf file.
----------------------------------------------------------------------------------
NoName MSF: 5 Type: P Thu May 15 16:18:29 2014 Check: 00 ..
Name: ENSP00000448051/1-207 Len: 214 Check: 6439 Weight: 1.00
Name: ENSBTAP00000002573/1-168 Len: 214 Check: 4049 Weight: 1.00
Name: bmy_07760T0/1-175 Len: 214 Check: 4194 Weight: 1.00
Name: ENSTTRP00000013128/1-168 Len: 214 Check: 3156 Weight: 1.00
Name: BACU008033/1-164 Len: 214 Check: 6911 Weight: 1.00
//
1 50
ENSP00000448051/1-207 -------MNS KGQYPTQPTY PVQPPGNPVY PQTLHLPQAP PYTDAPPAYS
ENSBTAP00000002573/1-168 -------MNS KGQYPTQPTY PVQPPGNPVY PQTLHLPQAP PYTDAPPAYS
bmy_07760T0/1-175 MGICRSKWGA RGQYPTQPTY PVQPPGNPVY PQTLHLPQAP PYTDAPPAYS
ENSTTRP00000013128/1-168 -------MNS KGQYPTQPTY PVQPPGNPVY PQTLHLPQAP PYTDAPPAYS
BACU008033/1-164 ---------- -GQYPTQPTY PVQPPGNPVY PQTLHLPQAP PYTDAPPAYS
51 100
ENSP00000448051/1-207 ELYRPSFVHP GAATVPTMSA AFPGASLYLP MAQSVAVGPL GSTIPMAYYP
ENSBTAP00000002573/1-168 ELYRPSFVHP GAATVPTMSA AFPGASLYLP MAQSVAVGPL GSTIPMAYYP
bmy_07760T0/1-175 ELYRPSFVHP GAATVPTMSA AFPGASLYLP MAQSVAVGPL GSTIPMAYYP
ENSTTRP00000013128/1-168 ELYRPSFVHP GAATVPTMSA AFPGASLYLP MAQSVAVGPL GSTIPMAYYP
BACU008033/1-164 ELYRPSFVHP GAATVPTMSA AFPGASLYLP MAQSVAVGPL GSTIPMAYYP
101 150
ENSP00000448051/1-207 VGPIYPPAST SWMPSQCCSA CSHAGSQRPR NSAEGELLHG WFRWWLHHLV
ENSBTAP00000002573/1-168 VGPIYPPGST VLVEGGY--- --DAGARFGA GATAGNIPP- ----------
bmy_07760T0/1-175 VGPIYPPGSA VLVEGGY--- --DAGARFGA GATAGNIPP- ----------
ENSTTRP00000013128/1-168 VGPIYPPGSA VLVEGGY--- --DAGARFGA GATAGNIPP- ----------
BACU008033/1-164 VGPIYPPGSA VLVEGGY--- --DAGARFGA GATAGNIPP- ----------
151 200
ENSP00000448051/1-207 RNQGHLCAGK DITYLQHFSQ CNCFSHINLK LQFRHMLLGC LSGAQTFRHF
ENSBTAP00000002573/1-168 PPPGCPPNAA QLAVMQG--- ----ANVLVT QRKGNFFMGG SDGGYTIW--
bmy_07760T0/1-175 PPPGCPPNAA QLAVMQG--- ----ANVLVT QRKGNFFMGG SDGGYTIW--
ENSTTRP00000013128/1-168 PPPGCPPNAA QLAVMQG--- ----ANVLVT QRKGNFFMGG SDGGYTIW--
BACU008033/1-164 PPPGCPPNAA QLAVMQG--- ----ANVLVT QRKGNFFMGG SDGGYTIW--
201 250
ENSP00000448051/1-207 SNLIRNHVMV AVPP
ENSBTAP00000002573/1-168 ---------- ----
bmy_07760T0/1-175 ---------- ----
ENSTTRP00000013128/1-168 ---------- ----
BACU008033/1-164 ---------- ----