KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:33 2014 Check: 00 .. Name: BACU017368/1-489 Len: 495 Check: 9380 Weight: 1.00 Name: ENSP00000376767/1-293 Len: 495 Check: 6602 Weight: 1.00 Name: ENSBTAP00000002592/1-263 Len: 495 Check: 5233 Weight: 1.00 Name: bmy_11655T0/1-293 Len: 495 Check: 4458 Weight: 1.00 Name: ENSTTRP00000009976/1-291 Len: 495 Check: 3523 Weight: 1.00 // 1 50 BACU017368/1-489 MGIAELPQE- LEVVGEERKV KNRALEKLDY QEHWSQFENA KSSSGPRGQS ENSP00000376767/1-293 MSRIPLGKVL LRNVIRHTDA HNKIQEESDM ---WKIRELE KQMEDAYRGT ENSBTAP00000002592/1-263 ---------- ---------- ---------M ---WKIRELE KQMDDAYRGT bmy_11655T0/1-293 MSRVPLGKVL LRNVIRHTDA HNKIQEESDM ---WKIRELE KQMEDAYRGT ENSTTRP00000009976/1-291 MSRVPLGKVL LRNVIRHTDA HNKIQEESDM ---WKIRELE KQMEDAYRGA 51 100 BACU017368/1-489 SETTYGQQPS RRPAKHKIRK QHKHRHGPKS LVT----EEL VVSQG-NQNN ENSP00000376767/1-293 KRKMLPSSSS RMRSDGFDEE SQRYYWRPKN EISGTLEDDF LKAKSWNKKF ENSBTAP00000002592/1-263 KRRMLPSSSS RMRSDGFDEE SQRDYWRPKN EICGALDDGF LKAKSWNKKL bmy_11655T0/1-293 KRKMLPSSSS RMRSDGFDEE SQRDYWRPKN EISGALDDDF LKAKSWNKKL ENSTTRP00000009976/1-291 KRKMLPSSSS RMRSDGFDEE SQRDYWRPKN EISGALDDDF LKAKSWNKKL 101 150 BACU017368/1-489 SSRQQQTPNK PIDTAVKQET VVMMDAPNND LQYSGIPRSQ EPKVTSNKFA ENSP00000376767/1-293 YDYEANMPDR WGHSGYKELY PEEFETDSSD QQDITNGKKT SPQVKSSTHE ENSBTAP00000002592/1-263 YDYEANMPDR WGHSGYKELY PEEFETDSSD QQDITNGKKT SPQVKSSTHE bmy_11655T0/1-293 HDYEANMPDR WGHSGYKELY PEEFETDSSD QQDITNGKKT SPQVKSSTHE ENSTTRP00000009976/1-291 HDYEANMPDR W-HSGYKELY -EEFETDSSD QQDITNGKKT SPQVKSSTHE 151 200 BACU017368/1-489 PPHQASDKVL YKNSTRYHSM MNVNTERGHK DQEEKRFSYL QLHIDTLXXX ENSP00000376767/1-293 SRKHKKSKKS HKKKQKKRS- --------HK KQKKSK---- ---------- ENSBTAP00000002592/1-263 SHKHKKSKKS HKKKQKKKS- --------HK KQKKSK---- ---------- bmy_11655T0/1-293 SHKHKKSKKS HKKKQKKKS- --------HK KQKKSK---- ---------- ENSTTRP00000009976/1-291 SHKHKKSKKS HKKKQKKKS- --------HK KQKKSK---- ---------- 201 250 BACU017368/1-489 XXXXXSNMDL NYLHELTKKH ASLSQKGSQS VSNINDNGST ENKKQPKGTY ENSP00000376767/1-293 ---------- -------KEA TDITADSSSE FSEETGASGT RKGKQPHKRK ENSBTAP00000002592/1-263 ---------- -------KEA TDITADSSSE FSEETGASST RKRKQPHKRK bmy_11655T0/1-293 ---------- -------KEA TDITADSSSE FSEETGASST WKRKQPHKRK ENSTTRP00000009976/1-291 ---------- -------KEA TDITADSSSE FSEETGASST RKRKQPHKRK 251 300 BACU017368/1-489 TETKYKNLEI LWKFHSSSES QPGSASPDSR LTRTMEQHQQ ALMHLTEVHP ENSP00000376767/1-293 KKSRKKSLK- ---------- ---------- --------KP ALFLEAESNT ENSBTAP00000002592/1-263 KKSRKKSLK- ---------- ---------- --------KS PL-LEAESDT bmy_11655T0/1-293 KKSRKKSLK- ---------- ---------- --------KS ALFLEAECDT ENSTTRP00000009976/1-291 KKSRKKSLK- ---------- ---------- --------KS ALFLEAECNT 301 350 BACU017368/1-489 HEGALPGVTL PPIPSRVESE SQLSSERSQR NQVKISRSNS EGYLFQLEKG ENSP00000376767/1-293 SHSD------ -------DSA SSSSEESEER DTKKTKR--- ---------- ENSBTAP00000002592/1-263 SPSD------ -------DSA SSSSEESEER DTKKTKR--- ---------- bmy_11655T0/1-293 SQSD------ -------DSA SSSSEESEER DTKKTKR--- ---------- ENSTTRP00000009976/1-291 SQSD------ -------DSA SSSSEESEER DTKKTKR--- ---------- 351 400 BACU017368/1-489 KKHMKRSSIK SSKLKGYQNR DVKLGGLGPD LESIRDKMQK LIQQKEYAKQ ENSP00000376767/1-293 KKREKKAHTS VAN------- ---------- -NEIQERTNK ---------- ENSBTAP00000002592/1-263 KKREKKAHIP VVN------- ---------- -NEIQERTNK ---------- bmy_11655T0/1-293 KKREKKAHIP VVN------- ---------- -NEIQERTNK ---------- ENSTTRP00000009976/1-291 KKRDKKAHIP VVN------- ---------- -SEIQERTNK ---------- 401 450 BACU017368/1-489 VKEYNLKALS IPSKPQIAKT ENKCAVPRQK ALEYAKTIPK PKPSNLSDQA ENSP00000376767/1-293 ---------- --------RT NWKVA----- ---------- ------TDER ENSBTAP00000002592/1-263 ---------- --------RT NWKVA----- ---------- ------TDER bmy_11655T0/1-293 ---------- --------RT NWKVA----- ---------- ------TDER ENSTTRP00000009976/1-291 ---------- --------RT NWKVA----- ---------- ------TDER 451 500 BACU017368/1-489 SKEKKNPTHA GKEDILPEIS LLEVLQNRHE REKQAVAAFK ALHIV ENSP00000376767/1-293 SAE------S SEDD------ ---------- ---------- ----- ENSBTAP00000002592/1-263 SAE------S SEDD------ ---------- ---------- ----- bmy_11655T0/1-293 SAE------S SEDD------ ---------- ---------- ----- ENSTTRP00000009976/1-291 SAE------S SEDD------ ---------- ---------- -----