KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:34 2014 Check: 00 .. Name: BACU008544/1-924 Len: 1327 Check: 1405 Weight: 1.00 Name: ENSBTAP00000002600/1-1170 Len: 1327 Check: 8389 Weight: 1.00 Name: ENSP00000260356/1-1170 Len: 1327 Check: 7479 Weight: 1.00 Name: bmy_21142T0/1-1268 Len: 1327 Check: 655 Weight: 1.00 Name: ENSTTRP00000000028/1-1144 Len: 1327 Check: 7777 Weight: 1.00 // 1 50 BACU008544/1-924 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002600/1-1170 ---------- ---------- ---------- ---------- ---------- ENSP00000260356/1-1170 ---------- ---------- ---------- ---------- ---------- bmy_21142T0/1-1268 ALGPAVECPP RRALPAQPPI PRPPGVPPCP RFSSARSRRC AFVAGPGRCT ENSTTRP00000000028/1-1144 ---------- ---------- ---------- ---------- ---------- 51 100 BACU008544/1-924 ---------- ----MGLAWA LSVLFLWHVC GSNRIPESGG DNSVFDIFEL ENSBTAP00000002600/1-1170 ---------- ----MGLAWG LGVLLLLHAC GSNRIPESGG DNSVFDIFEL ENSP00000260356/1-1170 ---------- ----MGLAWG LGVLFLMHVC GTNRIPESGG DNSVFDIFEL bmy_21142T0/1-1268 RVHTGSLLGT TSSTMGLAWG LCVLFLWHVC GSNRIPESGG DNSVFDIFEL ENSTTRP00000000028/1-1144 ---------- ---------- ---------- -------SER DNSVFDIFEL 101 150 BACU008544/1-924 TGAARKGSGR RLVKGPDPSS PAFRIEDANL IPPVPDDKFQ DLVDAVRAEK ENSBTAP00000002600/1-1170 TGAARKGSGR RLVKGPDPSS PAFRIEDANL IPPVPDKKFQ DLVDAVRAEK ENSP00000260356/1-1170 TGAARKGSGR RLVKGPDPSS PAFRIEDANL IPPVPDDKFQ DLVDAVRAEK bmy_21142T0/1-1268 TGAARKGSGR RLVKGPDPSS PAFRIEDANL IPPVPDDKFQ DLVDAVRAEK ENSTTRP00000000028/1-1144 TGAARKGSGR RLVKGPDPSS PAFRIEDANL IPPVPDDKFQ DLVDAVRAEK 151 200 BACU008544/1-924 GFLLLASLRQ MKKTRGTLLA VERKDHSGQV FSVVSNGKAG TLDLSLTVQG ENSBTAP00000002600/1-1170 GFLLLASLRQ MKKTRGTLLA VERKDHSGQV FSVISNGKAG TLDLSLTVQG ENSP00000260356/1-1170 GFLLLASLRQ MKKTRGTLLA LERKDHSGQV FSVVSNGKAG TLDLSLTVQG bmy_21142T0/1-1268 GFLLLASLRQ MKKTRGTLLA VERKDHSGQV FSVVSNGKAG TLDLSLTVQG ENSTTRP00000000028/1-1144 GFLLLASLRQ MKKTRGTLLA VERKDHSGQV FSVVSNGKAG TLDLSLTVQG 201 250 BACU008544/1-924 KQHVVSVEEA LLATGQWKSI TLFVQEDRAQ LYIDCEKMEN AELDVPIQSI ENSBTAP00000002600/1-1170 KQHVVSVEEA LLATGQWKSI TLFVQEDRAQ LYIDCEKMEN AELDVPIQSI ENSP00000260356/1-1170 KQHVVSVEEA LLATGQWKSI TLFVQEDRAQ LYIDCEKMEN AELDVPIQSV bmy_21142T0/1-1268 KQHVVSVEEA LLATSQWKSI TLFVQEDRAQ LYIDCEKMEN AELDVPIQSI ENSTTRP00000000028/1-1144 KQHVVSVEEA LLATGQWKSI TLFVQEDRAQ LYIDCEKMEN AELDAPIQSI 251 300 BACU008544/1-924 FTRDLASIAR LRIAKGGVND NFQGVLQNVR FVFGTTPEDI LRNKGCSSST ENSBTAP00000002600/1-1170 FTRDLASIAR LRIAKGGVND NFQGVLQNVR FVFGTTPEDI LRNKGCSSST ENSP00000260356/1-1170 FTRDLASIAR LRIAKGGVND NFQGVLQNVR FVFGTTPEDI LRNKGCSSST bmy_21142T0/1-1268 FTRDLASIAR LRIAKGGVND NFQGVLQNVR FVFGTTPEDI LRNKGCSSST ENSTTRP00000000028/1-1144 FTRDLASIAR LRIAKGGVND NFQGVLQNVR FVFGTTPEDI LRNKGCSSST 301 350 BACU008544/1-924 SVLLTLDNNV VNGSSPAIRT NYIGHKTKDL QAICGISCDE LSSMVLELRG ENSBTAP00000002600/1-1170 SVFVTLDNNV VNGSSPAIRT DYIGHKTKDL QAICGISCDE LSSMVLELRG ENSP00000260356/1-1170 SVLLTLDNNV VNGSSPAIRT NYIGHKTKDL QAICGISCDE LSSMVLELRG bmy_21142T0/1-1268 SVLLTLDNNV VNGSSPAIRT NYIGHKTKDL QAICGISCDE LSSMVLELRG ENSTTRP00000000028/1-1144 SVLLTLDNNV VNGSSPAIRT NYIGHKTKDL QAMCGISCDE LSNMVLELRG 351 400 BACU008544/1-924 LRTIVTTLQD SIRKVTEENK ELVNELRRPP LCYHNGVQYR NNEEWTVDSC ENSBTAP00000002600/1-1170 LRTIVTTLQD SIRKVTEENK ELANELRRPP LCYHNGVQYR TGDEWTVDSC ENSP00000260356/1-1170 LRTIVTTLQD SIRKVTEENK ELANELRRPP LCYHNGVQYR NNEEWTVDSC bmy_21142T0/1-1268 LRTIVTTLQD SIRKVTEENK ELVNELRRPP LCYHNGVQYR NNEEWTVDSC ENSTTRP00000000028/1-1144 LRTIVTTL-D SIRKVTEENK ELVNELRRPP LCYHNGVQYR NSEEWTVDSC 401 450 BACU008544/1-924 TECRCQNSVT ICKKVSCPIM PCSNATVPDG ECCPRCWPSD SADDGWSPWS ENSBTAP00000002600/1-1170 TECRCQNSVT ICKKVSCPIM PCSNATVPDG ECCPRCWPSD SADDGWSPWS ENSP00000260356/1-1170 TECHCQNSVT ICKKVSCPIM PCSNATVPDG ECCPRCWPSD SADDGWSPWS bmy_21142T0/1-1268 TECRCQNSVT ICKKVSCPIM PCSNATVPDG ECCPRCWPSD SADDGWSPWS ENSTTRP00000000028/1-1144 TECRCQNSVT ICKKVSCPIM PCSNATVPDG ECCPRCWPSD SADDGWSPWS 451 500 BACU008544/1-924 EWTSCSVTCG NGIQQRGRSC DSLNNRCEGS SVQTRTCHIQ ECDKRFKQDG ENSBTAP00000002600/1-1170 EWTSCSVTCG NGIQQRGRSC DSLNNRCEGS SVQTRTCHIQ ECDKRFKQDG ENSP00000260356/1-1170 EWTSCSTSCG NGIQQRGRSC DSLNNRCEGS SVQTRTCHIQ ECDKRFKQDG bmy_21142T0/1-1268 EWTSCSVTCG NGIQQRGRSC DSLNNRCEGS SVQTRTCHIQ ECDKRF---- ENSTTRP00000000028/1-1144 EWTSCSVTCG NGIQQR-RSC DSLNNRCESS SVQTR-CHIQ ECDKRFKQDG 501 550 BACU008544/1-924 GWSHWSPWSS CSVTCGDGVI TRIRLCNSPS PQMNGKPCEG EARETKACQK ENSBTAP00000002600/1-1170 GWSHWSPWSS CSVTCGDGVI TRIRLCNSPS PQMNGKPCEG KARETKACQK ENSP00000260356/1-1170 GWSHWSPWSS CSVTCGDGVI TRIRLCNSPS PQMNGKPCEG EARETKACKK bmy_21142T0/1-1268 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000000028/1-1144 GWSHWSPWSS CSVTCGDGVI TRIRLCNSPS PQMNGKPCEG EARETKACQK 551 600 BACU008544/1-924 DACPINGGWG PWSPWDICSV TCGGGVQKRS RLCNNPAPQF GGKDCVGDVT ENSBTAP00000002600/1-1170 DSCPINGGWG PWSPWDICSV TCGGGVQKRS RLCNNPTPQF GGKDCIGDVT ENSP00000260356/1-1170 DACPINGGWG PWSPWDICSV TCGGGVQKRS RLCNNPTPQF GGKDCVGDVT bmy_21142T0/1-1268 -----NGGWG PWSPWDICSV TCGGGVQKRS RLCNNPTPQF GGKDCVGDVT ENSTTRP00000000028/1-1144 DACPINGGWG PWSLWDICSV TCGGGVQKRS RLCNNPTPQF GGKDCVGDVT 601 650 BACU008544/1-924 ENQICNKQDC PIDGCLSNPC FADVKCTSYP DGSWKCGACP PGYSGNGIQC ENSBTAP00000002600/1-1170 ENQICNKQDC PIDGCLSNPC FAGVQCTSYP DGSWKCGACP PGYSGDGVEC ENSP00000260356/1-1170 ENQICNKQDC PIDGCLSNPC FAGVKCTSYP DGSWKCGACP PGYSGNGIQC bmy_21142T0/1-1268 ENQICNKQDC PIDGCLSNPC FADVKCTSYP DGSWKCGACP PGYSGNGIRC ENSTTRP00000000028/1-1144 ENQICNKQDC PIDGCLSNPC FADVKCTSYP DGSWKCGACP PGYSGNGIQC 651 700 BACU008544/1-924 KDVDECKEVP DACFNHNGEH RCENTDPGYN CLPCPPRFTG SQPFGRGVEH ENSBTAP00000002600/1-1170 KDVDECKEVP DACFNHNGEH RCENTDPGYN CLPCPPRFTG SQPFGRGVEH ENSP00000260356/1-1170 TDVDECKEVP DACFNHNGEH RCENTDPGYN CLPCPPRFTG SQPFGQGVEH bmy_21142T0/1-1268 KDVDECKEVP DACFNHNGEH RCENTDPGYN CLPCPPRFTG SQPFGRGVEH ENSTTRP00000000028/1-1144 KDVDECKEVP DACFNHNGEH RCENTDPGYN CLPCPPRFTG SQPFGRGVEH 701 750 BACU008544/1-924 ATTNKQVCKP RNPCTDGTHD CNKNAKCNYL SHYSDPMYRC ECKPGYAGNG ENSBTAP00000002600/1-1170 ATANKQVCKP RNPCTDGTHD CNKNAKCNYL GHYSDPMYRC ECKPGYAGNG ENSP00000260356/1-1170 ATANKQVCKP RNPCTDGTHD CNKNAKCNYL GHYSDPMYRC ECKPGYAGNG bmy_21142T0/1-1268 ATTNKQVCKP RNPCTDGTHD CNKNAKCNYL SHYSDPMYRC ECKPGYAGNG ENSTTRP00000000028/1-1144 ATTNKQVCKP RNPCMDGTHD CNKNAKCNYL SHYSDPMYRC ECKPGYAGNG 751 800 BACU008544/1-924 IICGEDTDLD GWPNEDLVCV ANATYHCKKD NCPNLPNSGQ EDYDKDGIGD ENSBTAP00000002600/1-1170 IICGEDTDLD GWPNEDLLCV ANATYHCRKD NCPNLPNSGQ EDYDKDGIGD ENSP00000260356/1-1170 IICGEDTDLD GWPNENLVCV ANATYHCKKD NCPNLPNSGQ EDYDKDGIGD bmy_21142T0/1-1268 IICGEDTDLD GWPNEDLVCV ANATYHCKKD NCPNLPNSGQ EDYDKDGIGD ENSTTRP00000000028/1-1144 IICGEDTDLD GWPNKDLVCV ANATYHCKKD NCPNLPNSGQ EDYDKDGIGD 801 850 BACU008544/1-924 ACDDDDDNDK IPDDRDNCPF HYNPAQYDYD RDDVGDRCDN CPYNHNPDQA ENSBTAP00000002600/1-1170 ACDDDDDNDK IPDDRDNCPF HYNPAQYDYD RDDVGDRCDN CPYNHNPDQA ENSP00000260356/1-1170 ACDDDDDNDK IPDDRDNCPF HYNPAQYDYD RDDVGDRCDN CPYNHNPDQA bmy_21142T0/1-1268 ACDDDDDNDK IPDDRDNCPF HYNPAQYDYD RDDVGDRCDN CPYNHNPDQA ENSTTRP00000000028/1-1144 ACDDDDDNDK IPDDRDNCPF HYNPAQYDYD RDDVGDRCDN CPYNHNPDQA 851 900 BACU008544/1-924 DTDNNGEGDA CAADIDGDGI LNERDNCQYV YNVDQRDTDM DGVGDQCDNC ENSBTAP00000002600/1-1170 DTDNNGEGDA CAADIDGDGI LNERDNCQYV YNVDQKDTDM DGVGDQCDNC ENSP00000260356/1-1170 DTDNNGEGDA CAADIDGDGI LNERDNCQYV YNVDQRDTDM DGVGDQCDNC bmy_21142T0/1-1268 DTDNNGEGDA CAADIDGDGI LNERDNCQYV YNVDQRDTDM DGVGDQCDNC ENSTTRP00000000028/1-1144 DTDNNGEGDA CAADIDGDGI LNERDNCQYV YNVDQRDTDM DGVGDQCDNC 901 950 BACU008544/1-924 PLEHNPDQLD SDSDRIGDTC DNNQDIDEDG HQNNLDNCPY VPNANQADHD ENSBTAP00000002600/1-1170 PLEHNPDQLD SDSDRIGDTC DNNQDIDEDG HQNNLDNCPY VPNANQADHD ENSP00000260356/1-1170 PLEHNPDQLD SDSDRIGDTC DNNQDIDEDG HQNNLDNCPY VPNANQADHD bmy_21142T0/1-1268 PLEHNPDQLD SDSDRIGDTC DNNQDIDEDG HQNNLDNCPY VPNANQADHD ENSTTRP00000000028/1-1144 PLEHNPDQLD SDSDRIGDTC DNNQDIDEDG HQNNLDNCPY VPNANQADHD 951 1000 BACU008544/1-924 KDGKGDACDH DDDNDGIXXX XXXXXXXXXX XX-------- ---------- ENSBTAP00000002600/1-1170 KDGKGDACDH DDDNDGIPDD RDNCRLVPNP DQKDSDGDGR GDACKDDFDQ ENSP00000260356/1-1170 KDGKGDACDH DDDNDGIPDD KDNCRLVPNP DQKDSDGDGR GDACKDDFDH bmy_21142T0/1-1268 KDGKGDACDH DDDNDGIPDD RDNCRLVPNP DQKDSDGDGR GDACKDDFDQ ENSTTRP00000000028/1-1144 KDGKGDACDH DDDNDGIPDD KDNCRLVPNP DQKDSDGDGR GDACKDDFDQ 1001 1050 BACU008544/1-924 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002600/1-1170 DKVPDIDDIC PENVDISETD FRRFQMIPLD PKGTSQNDPN WVVRHQGKEL ENSP00000260356/1-1170 DSVPDIDDIC PENVDISETD FRRFQMIPLD PKGTSQNDPN WVVRHQGKEL bmy_21142T0/1-1268 DNVPDIDDIC PENVDISETD FRRFQMIPLD PKGTSQNDPN WVVRHQGKEL ENSTTRP00000000028/1-1144 DNVPDIDDIC PENVDISETD FRRFQMIPLD PKGTSQNDPN WVVRHQGKEL 1051 1100 BACU008544/1-924 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002600/1-1170 VQTVNCDPGL AVGYDEFNAV DFSGTFFINT ERDDDYAGFV FGYQSSSRFY ENSP00000260356/1-1170 VQTVNCDPGL AVGYDEFNAV DFSGTFFINT ERDDDYAGFV FGYQSSSRFY bmy_21142T0/1-1268 VQTVNCDPGL AVGYDEFNAV DFSGTFFINT ERDDDYAGFV FGYQSSSRFY ENSTTRP00000000028/1-1144 VQTVNCDPGL AVGYDEFNAV DFSGTFFINT ERDDDYAGFV FGYQSSSRFY 1101 1150 BACU008544/1-924 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002600/1-1170 VVMWKQVTQS YWDTNPTRAQ GYSGLSVKVV NSTTGPGEHL RNALWHTGNT ENSP00000260356/1-1170 VVMWKQVTQS YWDTNPTRAQ GYSGLSVKVV NSTTGPGEHL RNALWHTGNT bmy_21142T0/1-1268 VVMWKQVTQS YWDTNPTRAQ GYSGLSVKVV NSTTGPGEHL RNALWHTGNT ENSTTRP00000000028/1-1144 VVMWKQVTQS YWDTNPTRAQ GYSGLSVKVV NSTTGPGEHL RNALWHTGNT 1151 1200 BACU008544/1-924 ---------- ---------- ---XXXXHS- ---------- ---------- ENSBTAP00000002600/1-1170 SGQVRTLWHD PRHIGWKDFT AYRWHLSHRP KTGFIRVVMY EGKKIMADSG ENSP00000260356/1-1170 PGQVRTLWHD PRHIGWKDFT AYRWRLSHRP KTGFIRVVMY EGKKIMADSG bmy_21142T0/1-1268 PGQVRTLWHD PRHIGWKDFT AYRWRLSHRP KTGFIRVVMY EGKKIMADSG ENSTTRP00000000028/1-1144 PGQVRTLWHD PRQIGWKDFT AYRWRLSHRP KTGFIRVVMY EGKKIMADSG 1201 1250 BACU008544/1-924 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002600/1-1170 PIYDKTYAGG RLGLFVFSQE MVFFSDLKYE CRDS------ ---------- ENSP00000260356/1-1170 PIYDKTYAGG RLGLFVFSQE MVFFSDLKYE CRDP------ ---------- bmy_21142T0/1-1268 PIYDKTYAGG RLGLFVFSQE MVFFSDLKYE CRVITYKLSL SLALGLLKNR ENSTTRP00000000028/1-1144 PIYDKTYAGG RLGLFVFSQE MVFFSDLKYE CRDS------ ---------- 1251 1300 BACU008544/1-924 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002600/1-1170 ---------- ---------- ---------- ---------- ---------- ENSP00000260356/1-1170 ---------- ---------- ---------- ---------- ---------- bmy_21142T0/1-1268 FLIIKLLMKR LIITIAGIAP SGTMGLRKPP GSLLPACLCS LLASVWTLRA ENSTTRP00000000028/1-1144 ---------- ---------- ---------- ---------- ---------- 1301 1350 BACU008544/1-924 ---------- ---------- ------- ENSBTAP00000002600/1-1170 ---------- ---------- ------- ENSP00000260356/1-1170 ---------- ---------- ------- bmy_21142T0/1-1268 CDLPQENAVF QIRLSIQPLN EKNLPRI ENSTTRP00000000028/1-1144 ---------- ---------- -------