KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:18:37 2014  Check: 00 ..

 Name: ENSP00000362684/1-163     Len:    163  Check:  5159  Weight:  1.00
 Name: ENSBTAP00000002627/1-162  Len:    163  Check:  1471  Weight:  1.00
 Name: ENSTTRP00000009253/1-163  Len:    163  Check:  6131  Weight:  1.00
 Name: bmy_11830T0/1-163         Len:    163  Check:  6568  Weight:  1.00
 Name: BACU003303/1-154          Len:    163  Check:  6079  Weight:  1.00

//


                          1                                                   50
ENSP00000362684/1-163     MSLGLLKFQA VGEEDEEDEE GESLDSVKAL TAKLQLQTRR PSYLEWTAQV 
ENSBTAP00000002627/1-162  MSLGPLKFQA VG-EDEEDDE AESLDSVKAL TAKLQLQTRR PSYLEWTARV 
ENSTTRP00000009253/1-163  MSMEPLKFQA VGEEDEEDEE EESLDSVKAL TAKLQLQTRR PSYLEWTAQV 
bmy_11830T0/1-163         MSLEPLKFQA VGEEDEEDEE EESLDSVKAL TAKLQLQTRR PSYVEWTAQV 
BACU003303/1-154          MSLEPLKFQA VGEEDEEDEE EESLDSVKAL TAKLQLQTRR PSYVEWTAQV 


                          51                                                 100
ENSP00000362684/1-163     QSQAWRRAQA KPGPGGPGDI CGFDSMDSAL EWLRRELREM QAQDRQLAGQ 
ENSBTAP00000002627/1-162  QSQAWHRAQA RPKPGGPGAI CGFDSMDSAL EWLRRELREM QAQDRQLAGQ 
ENSTTRP00000009253/1-163  QSQAWRRAQA RPEPGGPGTI CGFDSMDSAL EWLRRELREM QAQDRQLAGQ 
bmy_11830T0/1-163         QSQAWRRAQA RPEPGGPGTI CGFDSMDSAL EWLRRELREM QAQDRQLAGQ 
BACU003303/1-154          QSQAWRRAQA RPEPGGPGTI CGFDSMDSAL EWLRREL--- ------LAGQ 


                          101                                                150
ENSP00000362684/1-163     LLRLRAQLHR LKMDQACHLH QELLDEAELE LELEPGAGLA LAPLLRHLGL 
ENSBTAP00000002627/1-162  LLRLRAQLHR LKVDQVCHLH QELLNEAEME LEMEPGAGLA LAPPLRHLGL 
ENSTTRP00000009253/1-163  LLRLRAQLHR LKVDQVCHLH QELLNEAEME LELEPGAGLA LAPPLRHLGL 
bmy_11830T0/1-163         LLRLRAQLHR LKVDQVCHLH QELLNEAEME LELEPGAGLA LAPPLRHLGL 
BACU003303/1-154          LLRLRAQLHR LKVDQVCHLH QELLNEAELE LELEPGAGLA LAPPLRHLGL 


                          151                                                200
ENSP00000362684/1-163     TRMNISARRF TLC 
ENSBTAP00000002627/1-162  TRMNISARRF TLC 
ENSTTRP00000009253/1-163  TRMNISARRF TLC 
bmy_11830T0/1-163         TRMNISARRF TLC 
BACU003303/1-154          TRMNISARRF TLC