KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:37 2014 Check: 00 .. Name: ENSTTRP00000012731/1-259 Len: 298 Check: 6628 Weight: 1.00 Name: bmy_05491T0/1-282 Len: 298 Check: 7660 Weight: 1.00 Name: ENSP00000312107/1-259 Len: 298 Check: 1947 Weight: 1.00 Name: BACU010234/1-258 Len: 298 Check: 9778 Weight: 1.00 Name: ENSBTAP00000002634/1-258 Len: 298 Check: 6978 Weight: 1.00 // 1 50 ENSTTRP00000012731/1-259 MKEV------ ---------- ---------- ---------- --DNLESIKE bmy_05491T0/1-282 MSPVPLAAGN WNGSQDLRSF RLMLSGERLL LDPQLPRLNP PPDTSETFKW ENSP00000312107/1-259 MKDV------ ---------- ---------- ---------- --DNLKSIKE BACU010234/1-258 MKEV------ ---------- ---------- ---------- --DNLESIKE ENSBTAP00000002634/1-258 MKEV------ ---------- ---------- ---------- --DNLESIKE 51 100 ENSTTRP00000012731/1-259 EWVCETGSDH QPLSDNQQTN CEYFVDSLFE EAQKVGAKCL SPTEQKKQAD bmy_05491T0/1-282 ERVCETGSDH QPLSDNQQTN CEYFVDSLFE EAQKVGAKCL SPTEQKKQYV ENSP00000312107/1-259 EWVCETGSDN QPLGNNQQSN CEYFVDSLFE EAQKVSSKCV SPAEQKKQVD BACU010234/1-258 EWVCETGSDH QPLSDNQQTN CEYFVDSLFE EAQKVGAKCV SPTEQKKQAD ENSBTAP00000002634/1-258 EWVCETGSDH QPLSDSQQKN CEYFVDSLFE EAQKVGAKCL SPTEQKKQVD 101 150 ENSTTRP00000012731/1-259 VSIKLWKNGF TVNDDFRSYS DGASQQFLNS IKKGXXXXXX XXXXXXXXXX bmy_05491T0/1-282 FQRK------ ------KKHI RGFITFFLYF PR--ELPLEL QGXFDKEEVD ENSP00000312107/1-259 VNIKLWKNGF TVNDDFRSYS DGASQQFLNS IKKGELPSEL QGIFDKEEVD BACU010234/1-258 ISIKLWKNGF TVNDDFRSYS DGASQQFLNS IKKGELPLEL QGVFDNEEVD ENSBTAP00000002634/1-258 VSIKLWKNGF TVNDDFRSYS DGASQQFLNS IKKGELPLEL QGVFDKEEVD 151 200 ENSTTRP00000012731/1-259 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ATPKIVSKAK TIEVENKNKL bmy_05491T0/1-282 VKVEDKKNEV CMSTKPVFQP FSGQGHRLGS ATPKIVSKAK TIEVENKNKL ENSP00000312107/1-259 VKVEDKKNEI CLSTKPVFQP FSGQGHRLGS ATPKIVSKAK NIEVENKNNL BACU010234/1-258 VKVEDKKNEV CMSTKPVFQP FSGQGHRLGS ATPKIVSKAK TIEVENKNKL ENSBTAP00000002634/1-258 VKVEDKKNEV CMSTKPVFQP FSGQGHRLGS ATPKIVSKAK NIEVENKNKL 201 250 ENSTTRP00000012731/1-259 STVPLNSLEP ITNIQIWLAN GERIVQKFNI SHRVSHIKDF IEKYQGSQRS bmy_05491T0/1-282 STVPLNSLEP ITNIQIWLAN GKRIVQKFNI SHRVSHIKDF IEKXQGSQRS ENSP00000312107/1-259 SAVPLNNLEP ITNIQIWLAN GKRIVQKFNI THRVSHIKDF IEKYQGSQRS BACU010234/1-258 STVPLNSLEP ITNIQIWLAN GKRIVQKFNI SHRVSHIKDF IEKYQGSQRS ENSBTAP00000002634/1-258 SAVPLNNLEP ITNIQIWLAN GKRIVQKFNI SHRISHIKDF IEKYQGSQRS 251 300 ENSTTRP00000012731/1-259 PPFSLATALP FLKLLDETLT LEEANLQNAV IIQRLKKTAE PFKELL-H bmy_05491T0/1-282 PPFSLATALP FLTLLDETLT LEEANLQNAV IIQRLKKTAE PFKELS-- ENSP00000312107/1-259 PPFSLATALP VLRLLDETLT LEEADLQNAV IIQRLQKTAS -FRELSEH BACU010234/1-258 PPFSLATALP FLTLLDETLT LEEANLQNAV IIQRLKKTAE PFKELL-- ENSBTAP00000002634/1-258 PPFSLATALP FLKLLDETLT LEEADLQNAV IIQRLKKTAE PFKELS--