KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:38 2014 Check: 00 .. Name: ENSP00000379506/1-215 Len: 215 Check: 3571 Weight: 1.00 Name: bmy_15097T0/1-192 Len: 215 Check: 548 Weight: 1.00 Name: ENSBTAP00000002642/1-213 Len: 215 Check: 8054 Weight: 1.00 Name: ENSTTRP00000006341/1-211 Len: 215 Check: 1714 Weight: 1.00 Name: BACU004928/1-211 Len: 215 Check: 2232 Weight: 1.00 // 1 50 ENSP00000379506/1-215 MVFRRFVEVG RVAYVSFGPH AGKLVAIVDV IDQNRALVDG PCTQVRRQAM bmy_15097T0/1-192 MVFRRFVEVG RVAYVSFGPH AGRLVAIVDV IDQNRALVDG PCTQVRRQAM ENSBTAP00000002642/1-213 MVFRRFVEVG RVAYVSFGPH AGKLVAIVDV IDQNRALVDG PCTQVRRQAM ENSTTRP00000006341/1-211 AVFRRFVEVG RVAYVSFGPH AGRLVAIVDV IDQNRALVDG PCTQVRRQAM BACU004928/1-211 MVFRHFVEVG RVAYVSFGPH ARRLVAIVDV TDQNRALVDG PCTQVRRQAM 51 100 ENSP00000379506/1-215 PFKCMQLTDF ILKFPHSAHQ KYVRQAWQKA DINTKWAATR WAKKIEARER bmy_15097T0/1-192 PFKCMQLTDF ILKFPHS--- ---------- -----LGEGR YQCKVGSH-K ENSBTAP00000002642/1-213 PFKCMQLTDF ILKFPHSARQ KYVRKAWEKA DINAKWAATR WAKKIEAREK ENSTTRP00000006341/1-211 PFKCMQLTDF ILKFPHSARQ KYVRKAWEKA DINAKWAATR WAKKIEAREK BACU004928/1-211 PFKCMQLTDF ILKFPHSARQ KYVREAWEKA DINAKWAATR WAKKIEAREK 101 150 ENSP00000379506/1-215 KAKMTDFDRF KVMKAKKMRN RIIKNEVKKL QKAALLKASP KKAPGTKGTA bmy_15097T0/1-192 KAKMTDFDRY KVMKARKMRN RLIKLEVKKL QKAALLKASP KKALAAKG-- ENSBTAP00000002642/1-213 KAKMTDFDRY KVMKARKMRN RLIKIEVKKL QKAALLKASP KKALAAKG-- ENSTTRP00000006341/1-211 KAKMTDFDRY KVMKARKMRN RLIKLEVKKL QKAALLKASP KKALAAKG-- BACU004928/1-211 KAKMTDFDRY KVMKARKMRN RLIKLEVKKL QKAALLKASP KKALAAKG-- 151 200 ENSP00000379506/1-215 AAAAAAAAAK VPAKKITAAS KKAPAQKVPA QKATGQKAAP APKAQKGQKA bmy_15097T0/1-192 AA--TAAAAK VPAKKMTATG KKAPAQKVPA QKAAGQKAAP PPKAQKGQKA ENSBTAP00000002642/1-213 AAAVAAAAAK VPAKKITTEG KKAPAQKAPA QKAAGQKAAP PPKTQKGQKA ENSTTRP00000006341/1-211 AA--TAAAAK VPAKKMTATG KKAPAQKVTA QKAAGQKAAP PPKAQKCQKA BACU004928/1-211 AA--TAAAAK VPAKKMTATG KKAPAQKVPA QKAAGQKAAP PPKAQKGQKA 201 250 ENSP00000379506/1-215 PAQKAPAPKA SGKKA bmy_15097T0/1-192 PAQKAPAPKA SGKKA ENSBTAP00000002642/1-213 PSQKAPAPKA SGKKA ENSTTRP00000006341/1-211 PAQKAPAPKA CGKKP BACU004928/1-211 PAQKAPAQKA SGKKA