KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:39 2014 Check: 00 .. Name: ENSP00000325941/1-537 Len: 623 Check: 5038 Weight: 1.00 Name: BACU003648/1-540 Len: 623 Check: 3920 Weight: 1.00 Name: ENSBTAP00000002646/1-530 Len: 623 Check: 2257 Weight: 1.00 Name: bmy_04957T0/1-616 Len: 623 Check: 9151 Weight: 1.00 Name: ENSTTRP00000012833/1-536 Len: 623 Check: 1042 Weight: 1.00 // 1 50 ENSP00000325941/1-537 MEPRAVAEAV ETGEEDVIME ALRSYNQEHS QSFTFDDAQQ EDRKRLAELL BACU003648/1-540 ---------- ------MLNK AFLPSGWTNC QSFTFDDAQQ EDRKRLAELL ENSBTAP00000002646/1-530 MEPRAVADAL ETGEEDVVME ALRAYNRENS QSFTFDDAQQ EDRKRLAKLL bmy_04957T0/1-616 MEPRAVADAV ETGEEDVVME ALRAYNRENC QSFTFDDAQQ EDRKRLAELL ENSTTRP00000012833/1-536 MEPRAVADAV ETGEEDVVME ALRAYNRENC QSFTFDAAQQ EDRKRLAELL 51 100 ENSP00000325941/1-537 VSVLEQGLPP SHRVIWLQSV RILSRDRNCL DPFTSRQSLQ ALACYADISV BACU003648/1-540 VSALEPGLPP SRRTIWLQSV RILSRDRSCL DSFTSRRSLQ ALACYAGISA ENSBTAP00000002646/1-530 VSVLEQGLPP SRRVIWLQSI RILSRDRSCL DSFTSRRSLQ ALACYAGISA bmy_04957T0/1-616 VSVLEQGLPP SRRIIWLQSI RILSRDRSCL DSFTSRRSLQ ALACYAGISA ENSTTRP00000012833/1-536 VSVLEQGLPP SRRIIWLQSI RILSRDRSCL DSFTSRRSLQ ALACYAGISA 101 150 ENSP00000325941/1-537 SEGSVPESAD MDVVLESLKC LCNLVLSSPV AQMLAAEARL VVKLTERVGL BACU003648/1-540 SPGSVPEPLD MDVVLESLKC LCNLVLSSPV AQVLAAEAGL VVRLAERVRL ENSBTAP00000002646/1-530 SQGSVPEPLN MDVVLESLKC LCNLVLSSPV AQALAAEAGL VVRLAERVGL bmy_04957T0/1-616 SQGSVPEPLD MDVVLESLKC LCNLVLSSPV AQVLAAEAGL VVRLAERVGL ENSTTRP00000012833/1-536 SQGSVPEPLD MDVVLESLKC LCNLVLSSPV AQVLAAEAGL VVRLAERVGL 151 200 ENSP00000325941/1-537 YRERSFPHDV QFFDLRLLFL LTALRTDVRQ QLFQELKGVR LLTDTLELTL BACU003648/1-540 YRQRSFPHDV QFFDLRLLFL LTALRADVRQ QLFQELQGVH LLTEALELTL ENSBTAP00000002646/1-530 CRQSSFPHDV QFFDLRLLFL LTALRTDVRQ QLFQELQGVR LLTRALELTL bmy_04957T0/1-616 YRQSSFPHDV QFFDLRLLFL LTALRADVRQ QLFQELQGVH LLTEALELTL ENSTTRP00000012833/1-536 YRQSSFPHDV QFFDLRLLFL LTALRADVRQ QLFQELQGVH LLTEALELTL 201 250 ENSP00000325941/1-537 GVTPEGNPPP TLLPSQETER AMEILKVLFN ITLDSIKGEV DEEDAALYRH BACU003648/1-540 GMTP-GERPP ELLPPQETER AMEILKVLFN ITFDSIKKEV DEEDTALYRH ENSBTAP00000002646/1-530 GMTE-GERHP ELLPPQETER AMEILKVLFN ITFDSIKREV DEEDAALYRH bmy_04957T0/1-616 GMTP-GERPP ERLPPQETER AMEILKVLFN ITFDSIKREV DEEDTALYRH ENSTTRP00000012833/1-536 GMTP-GERPP ELLPPQETER AMEILKVLFN ITFDSIKREV DEEDTALYRH 251 300 ENSP00000325941/1-537 LGTLLRHCVM IATAGDRTEE FHGHAVNLLG NLPLKCLDVL LTLEPHGDST BACU003648/1-540 LGTLLRHCVM VAAAGDRTEE FHGHTVNLLG NLPLKCLDVL LTLEPHEGSL ENSBTAP00000002646/1-530 LGTLLRHCVM LAAAGDRTEE LHGHAVNLLG NLPVKCLDVL LTLEPHEGSL bmy_04957T0/1-616 LGTLLRHCVM VAAAGDRTEE FHGHTVNLLG NLPLKCLDVL LSLEPHEGSL ENSTTRP00000012833/1-536 LGTLLRHCVM AAAAGDRTEE FHGHTVNLLG NLPLKCLDVL LTLEPHEGSL 301 350 ENSP00000325941/1-537 EFMGVNMDVI RALLIFLEKR LH-------- ---------- ---------- BACU003648/1-540 EFLGVNMDVI GVLLSFLEKR LH-------- ---------- ---------- ENSBTAP00000002646/1-530 EFLGVNMDVI RVLLSFMEKR LH-------- ---------- ---------- bmy_04957T0/1-616 EXLGVNVDVI GVLLSFLEKR LRQGGKLDSK QLSDLPQVAG HANGPELGST ENSTTRP00000012833/1-536 EFLGVNMDVI RVLLSFLEKR LH-------- ---------- ---------- 351 400 ENSP00000325941/1-537 ---------- ---------- ---------- ---------- ---------- BACU003648/1-540 ---------- ---------- ---------- --QDRVAHVP SSPGLESDGH ENSBTAP00000002646/1-530 ---------- ---------- ---------- ---------- ---------- bmy_04957T0/1-616 PVLFEAHTDT HCPLLAPQRG PLWPGLVPNA SCQDRVVRVP SSPGLESDGH ENSTTRP00000012833/1-536 ---------- ---------- ---------- ---------- ---------- 401 450 ENSP00000325941/1-537 --------KT HRLKESVAPV LSVLTECARM HRPARKFLKA QGWPPPQVLP BACU003648/1-540 SPVTEAALQT HRLKESVAPA LSVLTECARV HRPARKFLKA ------QVLP ENSBTAP00000002646/1-530 --------QT HRLKESVAPV LSVLTECARM HRPARKFLKA ------QVLP bmy_04957T0/1-616 SPVTEAPLQT HRLKESVAPV LSVLTECARV HRPARKFLKA ------QVLP ENSTTRP00000012833/1-536 --------QT HRLKESVAPV LSVLTECARM HRPARKFLKA QGQLHPQVLP 451 500 ENSP00000325941/1-537 PLRDVRTRPE VGEMLRNKLV RLMTHLDTDV KRVAAEFLFV LCSESVPRFI BACU003648/1-540 PLRDVRTRPE VGELLRNKLV RLMTHLDTDV KRVAAEFLFV LCSESVPRFI ENSBTAP00000002646/1-530 PLRDVRTRPE VGELLRNKLV RLMTHLDTDV KRVAAEFLFV LCSESVPRFI bmy_04957T0/1-616 PLRDVRTRPE VGELLRNKLV RLMTHLDTDV KRVAAEFLFV LCSESVPRFI ENSTTRP00000012833/1-536 PLRDVRTRPE VGELLRNKLV RLMTHLDTDV KRVAAEFLFV LCSESVPRFI 501 550 ENSP00000325941/1-537 KYTGYGNAAG LLAARGLMAG GRPEGQYSED EDTDTDEYKE AKASINPVTG BACU003648/1-540 KYTGYGNAAG LLAARGLMAG GRPEGQYSED EDTDTDEYKE AKASINPVTG ENSBTAP00000002646/1-530 KYTGYGNAAG LLAARGLMAG GRPEGQYSED EDTDTDEYKE AKASINPVTG bmy_04957T0/1-616 KYTGYGNAAG LLAARGLMAG GRPEGQYSED EDTDTDEYKE AKASINPVTG ENSTTRP00000012833/1-536 KYTGYGNAAG LLAARGLMAG GRPEGQYSED EDTDTDEYKE AKASINPVTG 551 600 ENSP00000325941/1-537 RVEEKPPNPM EGMTEEQKEH EAMKLVTMFD KLSRNRVIQP MGMSPRGHLT BACU003648/1-540 RVEEKPPDPT EGMTEEQKEH EAMKLVTMFD RLSRHRVIQP MGMSPRGQLT ENSBTAP00000002646/1-530 RVEEKPPNPM EGMTEEQKEH EAMKLVNMFD KLSRHRVIQP MGMSPRGQLT bmy_04957T0/1-616 RVEEKPPDPT AGMTEEQKEH EAVKLVTMFD RLSRHRVIQP MGMSPRGQLT ENSTTRP00000012833/1-536 RVEEKPPNPM EGMTEEQKEH EAMKLVNMFD KLSRHRVIQP MGMSPRGQLT 601 650 ENSP00000325941/1-537 SLQDAMCETM EQQLSSDPDS DPD BACU003648/1-540 ALQDAMREAL EAQLDSDPDS DPD ENSBTAP00000002646/1-530 SLQDAMCETM EGQLSSDPDS DPD bmy_04957T0/1-616 SLQDAMCETM EAQLSSDPDS DPD ENSTTRP00000012833/1-536 SLQDAMCETM EGQLSSDPDS DPD