KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:39 2014 Check: 00 .. Name: ENSP00000372191/1-399 Len: 405 Check: 6486 Weight: 1.00 Name: ENSTTRP00000012839/1-384 Len: 405 Check: 8762 Weight: 1.00 Name: ENSBTAP00000002648/1-333 Len: 405 Check: 9660 Weight: 1.00 Name: bmy_04958T0/1-333 Len: 405 Check: 967 Weight: 1.00 Name: BACU003647/1-260 Len: 405 Check: 2786 Weight: 1.00 // 1 50 ENSP00000372191/1-399 MAFWGWRAAA ALRLWGRVVE RVEAGGGVGP FQACGCRLV- --LGGRDDVS ENSTTRP00000012839/1-384 MALWACSVVP ALRLWG---- -----GGARP WTRGLWFVLG DGGGGGGGRG ENSBTAP00000002648/1-333 MALFPRSAVP ALRFWGL--- -----RGARA WTR------- ---------- bmy_04958T0/1-333 MALWACSVVP ALRLWGL--- -----GGARP WTR------- ---------- BACU003647/1-260 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000372191/1-399 AGLRGSHGAR GEPLDPARPL QRPPRPEVPR AFRRQPRAAA PSFFFSSIKG ENSTTRP00000012839/1-384 PGRRGSEGVR GEDLKMASPC SRGPRV---- ---FRRPMAF VSRFFPGVAG ENSBTAP00000002648/1-333 ---------- ---------- ---------- ---------- ----WPRIPG bmy_04958T0/1-333 ---------- ---------- ---------- ---------- ----RPRIAG BACU003647/1-260 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000372191/1-399 GRRSISFSVG ASSVVGSGGS SDKGKLSLQD VAELIRARAC QRVVVMVGAG ENSTTRP00000012839/1-384 GGRPISFSAG ASSVSGSGGH SQ--KFLLQD IAELIKTRAC QRVVVMVGAG ENSBTAP00000002648/1-333 GGWSISCFAG ASSDTGGGDH SQK-KFLLQD IAELIKTRAC QKVVVMVGAG bmy_04958T0/1-333 GGRPISFSAG ASSVSGSGGH SP--KFLLQD VAELIKTRAC QRVVVMAGAG BACU003647/1-260 ---------- ---------- ---------- ---------- -----MVGAG 151 200 ENSP00000372191/1-399 ISTPSGIPDF RSPGSGLYSN LQQYDLPYPE AIFELPFFFH NPKPFFTLAK ENSTTRP00000012839/1-384 ISTPSGVPDF RSPGTGYYSN LQQYKIPYPE AIFELSFFFR DPKPFFTFAK ENSBTAP00000002648/1-333 ISTPSGIPDF RSPGVGYYSI LQQYKLPYPE AIFELSFFFH DPKPFFTFAK bmy_04958T0/1-333 ISTPSGVPDF RSPGTGYYSN LQQYKIPYPE AIFELSFFFR DPKPFFTFAK BACU003647/1-260 ISTPSGVPDF RSPGTGYYSN LQQYKIPYPE AIFELSFFFR DPKPFFTFAK 201 250 ENSP00000372191/1-399 ELYPGNYKPN VTHYFLRLLH DKGLLLRLYT QNIDGLERVS GIPASKLVEA ENSTTRP00000012839/1-384 ELYPGNYRPN ATHYFLRLLH DKGLLLRLYT QNIDGLERAS GIPASKLVEA ENSBTAP00000002648/1-333 KLYPGNYRPN ATHYFLRLLH EKGLLLRLYT QNIDGLERAS GIPDSKLVEA bmy_04958T0/1-333 ELYPGNYRPN ATHYFLRLLH DKGLLLRLYT QNIDGLERAS GIPASKLVEA BACU003647/1-260 ELYPGNYRPN ATHYFLRLLH DKGLLLRLYT QNIDGLERAS GIPASKLVEA 251 300 ENSP00000372191/1-399 HGTFASATCT VCQRPFPGED IRADVMADRV PRCPVCTGVV KPDIVFFGEP ENSTTRP00000012839/1-384 HGSFASATCT VCRRPFPGED FWXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSBTAP00000002648/1-333 HGSLASATCT VCRRPYPGED FWADVMADRV PRCPVCSGVT KPDIVFFGEP bmy_04958T0/1-333 HGSFASATCT VCRRPFPGED FWADVMVDRV PRCPVCTGVV KPDIVFFGEM BACU003647/1-260 HGSFASATCT VCRRPFPGED FWADVMVDRV PRCPVCTGVV KPDIVFFGEM 301 350 ENSP00000372191/1-399 LPQRFLLHVV DFPMADLLLI LGTSLEVEPF ASLTEAVRSS VPRLLINRDL ENSTTRP00000012839/1-384 XXXXFLLHLA DFPMADLLLI LGTSLEVEPF ASLSEAVRSS VPRLLINRDL ENSBTAP00000002648/1-333 LPARFLLHLA DFPMADLLLI LGTSLEVEPF ASLSDAVRSS VPRLLINRDL bmy_04958T0/1-333 LPHRFLLHLA DFPMADLLLI LGTSLEVEPF ASLSEAVRSS VPRLLINRDL BACU003647/1-260 LPHRFLLHLA DFPMADLLLI LGTSLEVEPF ASLSEAVRSS VPRLLINRDL 351 400 ENSP00000372191/1-399 VGPLAWHPRS RDVAQLGDVV HGVESLVELL GWTEEMRDLV QRETGKLDGP ENSTTRP00000012839/1-384 VGSLARHPRG RDVVQLGDVV HGVKRLVELL GWTEEMRDLI QRETGKLDGW ENSBTAP00000002648/1-333 VGSLARNPRG RDVAQLGDVV HGVKRLVELL GWTDDIQDLI QRETGKFDGW bmy_04958T0/1-333 VGSLARHPRG RDVVQLGDVV HGVKRLVELL GWTEEMRDLI QRETGKIDGW BACU003647/1-260 VGSLARHPRG RDVVQLGDVV HGVKRLVELL GWTEEMRDLI QRETGKIDGW 401 450 ENSP00000372191/1-399 DK--- ENSTTRP00000012839/1-384 DK--- ENSBTAP00000002648/1-333 DRL-- bmy_04958T0/1-333 DK-GE BACU003647/1-260 DKLGE