KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:18:41 2014 Check: 00 .. Name: ENSBTAP00000002658/1-727 Len: 784 Check: 3200 Weight: 1.00 Name: ENSP00000196061/1-727 Len: 784 Check: 3463 Weight: 1.00 Name: bmy_12770T0/1-780 Len: 784 Check: 8945 Weight: 1.00 Name: ENSTTRP00000003286/1-727 Len: 784 Check: 2232 Weight: 1.00 // 1 50 ENSBTAP00000002658/1-727 ---------- ---------- ---------- ---------- ---------- ENSP00000196061/1-727 ---------- ---------- ---------- ---------- ---------- bmy_12770T0/1-780 RASLQETLPP GSAARHRPRG GPSAWQRDQR PRREVSSLRA SAAGHAGRSQ ENSTTRP00000003286/1-727 ---------- ---------- ---------- ---------- ---------- 51 100 ENSBTAP00000002658/1-727 ---MRLLLLL APLGWLLLAE TKGDAKPEGE GSGLGAVCRE VLGFRARHFL ENSP00000196061/1-727 ---MRPLLLL ALLGWLLLAE AKGDAKPEDN LLVLTVATKE TEGF--RRFK bmy_12770T0/1-780 TRTMRLQLLL APLGWLLLVE TKGDAKPEDN LLVLTVATEE TEGF--RRFK ENSTTRP00000003286/1-727 ---MRLQLLL APLGWLLLVE TKGDAKPEDN LLVLTVATKE TEGF--RRFK 101 150 ENSBTAP00000002658/1-727 SCAQCYFVEY PAQAL----H WSLESEDQGM GGTTVRTKRL SRDREGNKKT ENSP00000196061/1-727 RSAQ--FFNY KIQALGLGED WNVEKGTSAG GGQKVRLLKK ALEKHADKED bmy_12770T0/1-780 RSAQ--FFNY KIQALGLGED WHGEKEMSAG GGLKVRLLKK ALEKHADKEN ENSTTRP00000003286/1-727 RSAQ--FFNY KIQALGLGED WHEEKEMSAG GGLKVRLLKK ALEKHADKEN 151 200 ENSBTAP00000002658/1-727 LYILFTDSYD VVFASGPREL LKKFRQARSQ VVFSAEELIY PDRRLEAKYP ENSP00000196061/1-727 LVILFADSYD VLFASGPREL LKKFRQARSQ VVFSAEELIY PDRRLETKYP bmy_12770T0/1-780 LVILFTDSYD VLFASGPREL LKKFRQARSQ VVFSAEELIY PDRRLEAKYP ENSTTRP00000003286/1-727 LVILFTDSYD VVFASGPREL LKKFRQARSQ VVFSAEELIY PDRRLEAKYP 201 250 ENSBTAP00000002658/1-727 VVSDGKRFLG SGGFIGYAPN LSKLVAEWEG QDSDSDQLFY TKIFLDPEKR ENSP00000196061/1-727 VVSDGKRFLG SGGFIGYAPN LSKLVAEWEG QDSDSDQLFY TKIFLDPEKR bmy_12770T0/1-780 VVSDGKRFLG SGGFIGYAPN LSKLVAEWEG QDSDSDQLFY TKIFLDPEKR ENSTTRP00000003286/1-727 VVSDGKRFLG SGGFIGYAPN LSKLVAEWEG QDSDSDQLFY TKIFLDPEKR 251 300 ENSBTAP00000002658/1-727 EQINITLDHR CRIFQNLDGA LDEVVLKFEM GQVRARNLAY DTLPVLIHGN ENSP00000196061/1-727 EQINITLDHR CRIFQNLDGA LDEVVLKFEM GHVRARNLAY DTLPVLIHGN bmy_12770T0/1-780 EGINITLDHR CRIFQNLDGA LDEVVLKFEM GQVRARNLAY DTLPVLIHGN ENSTTRP00000003286/1-727 EGINITLDHR CRIFQNLDGA LDEVVLKFEM GQVRARNLAY DTLPVLIHGN 301 350 ENSBTAP00000002658/1-727 GPTKLQLNYL GNYIPRFWTF ETGCAVCDEG LRSLKGIGDE ALPAVLVGVF ENSP00000196061/1-727 GPTKLQLNYL GNYIPRFWTF ETGCTVCDEG LRSLKGIGDE ALPTVLVGVF bmy_12770T0/1-780 GPTKLQLNYL GNYIPRFWTF ETGCAVCDEG LHSLKGIGDE ALPTVLVGVF ENSTTRP00000003286/1-727 GPTKLQLNYL GNYIPRFWTF ETGCAVCDEG LRSLKGIGDE ALPMVLVGVF 351 400 ENSBTAP00000002658/1-727 IEQPTPFLSL FFQRLLRLHY PQKRLRLFIH NHEQHHKAQV EQFLAEHGDE ENSP00000196061/1-727 IEQPTPFVSL FFQRLLRLHY PQKHMRLFIH NHEQHHKAQV EEFLAQHGSE bmy_12770T0/1-780 IEQPTPFLSL FFQRLLRLHY PRKRLRLFIH SHEQQHETQV EQFLAEHGSE ENSTTRP00000003286/1-727 IEQPTPFLSL FFQRLLRLHY PRKRLRLFIH SHEQQHKTQV EQFLAEHGSE 401 450 ENSBTAP00000002658/1-727 YQSVKLVGPE VRVANADARN MGADLCRQDR GCTYYFSVDA DVALTEPKTL ENSP00000196061/1-727 YQSVKLVGPE VRMANADARN MGADLCRQDR SCTYYFSVDA DVALTEPNSL bmy_12770T0/1-780 YQSVKLLGPE VRVANADARN MGVDLCRQDR GCTYYFSVDA DVALTEPQTL ENSTTRP00000003286/1-727 YLSVKLLGPE VRVANADARN MGVDLCRQDR GCTYYFSIDA DVALTEPKTL 451 500 ENSBTAP00000002658/1-727 RLLIEQNKNV IAPLMTRHGR LWSNFWGALS ADGYYARSED YVDIVQGRRV ENSP00000196061/1-727 RLLIQQNKNV IAPLMTRHGR LWSNFWGALS ADGYYARSED YVDIVQGRRV bmy_12770T0/1-780 QLLIEQNKNV IAPLMTRHGR LWSNFWGTLS ADGYYARSED YVDIVQGRRV ENSTTRP00000003286/1-727 QLLIEQNKNV IAPLMTRHGR LWSNFWGALS ADGYYARSED YVDIVQGRRV 501 550 ENSBTAP00000002658/1-727 GVWNVPYISN IYLIKGSALR AELQETDLFH HSKLDPDMAF CANIRQQDVF ENSP00000196061/1-727 GVWNVPYISN IYLIKGSALR GELQSSDLFH HSKLDPDMAF CANIRQQDVF bmy_12770T0/1-780 GVWNVPYISN IYLIKGSALR AELQEMDLFH HSKLDPDMAF CANIRQQDVF ENSTTRP00000003286/1-727 GVWNVPYISN IYLIKGSALR AELQEMDLFH HSKLDPDMAF CANIRQQDVF 551 600 ENSBTAP00000002658/1-727 MFLTNRHSFG HLLSLDSYQT THLHNDLWEV FSNPEDWKEK YIHENYTKAL ENSP00000196061/1-727 MFLTNRHTLG HLLSLDSYRT THLHNDLWEV FSNPEDWKEK YIHQNYTKAL bmy_12770T0/1-780 LFLTNRHTFG HLLSLDSYQT THLHNDLWEV FSNPEDWKEK YIHENYTKAL ENSTTRP00000003286/1-727 LFLTNRHAFG HLLSLDSYQT THLHNDLWEV FSNPEDWKEK YIHENYTKAL 601 650 ENSBTAP00000002658/1-727 AGKMVEMPCP DVYWFPIFTE TACDELVEEM EHYGQWSLGD NKDNRIQGGY ENSP00000196061/1-727 AGKLVETPCP DVYWFPIFTE VACDELVEEM EHFGQWSLGN NKDNRIQGGY bmy_12770T0/1-780 AGKMVEMPCP DVYWFPIFTE TACDELVEEM EHYGRWSLGD NRDNRIQGGY ENSTTRP00000003286/1-727 AGKMVEMPCP DVYWFPIFTE TACDELVGEM EHYGQWSLGD NKDNRIQGGY 651 700 ENSBTAP00000002658/1-727 ENVPTIDIHM NQINFEREWH KFLVEYIAPM TEKLYPGYYT RAQFDLAFVV ENSP00000196061/1-727 ENVPTIDIHM NQIGFEREWH KFLLEYIAPM TEKLYPGYYT RAQFDLAFVV bmy_12770T0/1-780 ENVPTIDIHM NQINFEREWH KFLVEYIAPM TEKLYPGYYT RAQFDLAFVV ENSTTRP00000003286/1-727 ENVPTIDIHM NQINFEREWH KFLVEYIAPM TEKLYPGYYT RAQFDLAFVV 701 750 ENSBTAP00000002658/1-727 RYKPDEQPSL VPHHDASTFT INIALNRVGV DYEGGGCRFL RYNCSIRAPR ENSP00000196061/1-727 RYKPDEQPSL MPHHDASTFT INIALNRVGV DYEGGGCRFL RYNCSIRAPR bmy_12770T0/1-780 RYKPDEQPSL MPHHDASTFT INIALNRVGV DYEGGGCRFL RYNCSVRAPR ENSTTRP00000003286/1-727 RYKPDEQPSL MPHHDASTFT INIALNRAGV DYEGGGCRFL RYNCSVRAPR 751 800 ENSBTAP00000002658/1-727 KGWTLMHPGR LTHYHEGLPT TKGTRYIAVS FVDP ENSP00000196061/1-727 KGWTLMHPGR LTHYHEGLPT TRGTRYIAVS FVDP bmy_12770T0/1-780 KGWTLMHPGR LTHYHEGLPT TKGTRYIAVS FVDP ENSTTRP00000003286/1-727 KGWTLMHPGR LTHYHEGLPT TKGTRYIAVS FVDP