KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:18:42 2014 Check: 00 .. Name: ENSP00000314505/1-1143 Len: 1144 Check: 2960 Weight: 1.00 Name: ENSBTAP00000002665/1-1139 Len: 1144 Check: 5643 Weight: 1.00 Name: bmy_12454T0/1-731 Len: 1144 Check: 1247 Weight: 1.00 Name: BACU014260/1-1034 Len: 1144 Check: 8330 Weight: 1.00 // 1 50 ENSP00000314505/1-1143 MNSDQVTLVG QVFESYVSEY HKNDILLILK ERDEDAHYPV VVNAMTLFET ENSBTAP00000002665/1-1139 MNSDQVTLVG QVFESYVSEY HKNDILLILK ERDEDAHYPV VVNAMTLFET bmy_12454T0/1-731 ---------- ---------- ---------- ---------- ---------- BACU014260/1-1034 MNSNQVTLVG QVFESYVSEY HKNDILLILK ERDEDAHYPV VVNAMTLFET 51 100 ENSP00000314505/1-1143 NMEIGEYFNM FPSEVLTIFD SALRRSALTI LQSLSQPEAV SMKQNLHARI ENSBTAP00000002665/1-1139 NMEIGEYFNA FPNEVLTIFD NALRRSALTI LQSLSQPEGL SMKQNLHARI bmy_12454T0/1-731 ---------- ---------- ---------- ---------- ---------- BACU014260/1-1034 NMEIGEYFNA FPNEVLTIFD SALRRSALTI LQSLSQPEGV SMKQNLHARI 101 150 ENSP00000314505/1-1143 SGLPVCPELV REHIPKTKDV GHFLSVTGTV IRTSLVKVLE FERDYMCNKC ENSBTAP00000002665/1-1139 SGLPVCPELV REHIPKTKDV GHFLSVTGTV IRTSLVKILE FERDYMCNKC bmy_12454T0/1-731 ---------- ---------- ---------- ---------- ---------- BACU014260/1-1034 SGLPVCPELV REHIPRTKDV GHFLSVTGTV IRTSLVKILE FERDYMCNKC 151 200 ENSP00000314505/1-1143 KHVFVIKADF EQYYTFCRPS SCPSLESCDS SKFTCLSGLS SSPTRCRDYQ ENSBTAP00000002665/1-1139 KHVFVVQADF EQYYTFFRPS SCPSLENCDS SKFTCLSDL- SSPTRCRDYQ bmy_12454T0/1-731 ---------- ---------- ---------- ---------- ---------- BACU014260/1-1034 KHVFVVRADF EQYYTFCRPS SCPSLESCDS AKFTCLSDLS SSPTRCRDYQ 201 250 ENSP00000314505/1-1143 EIKIQEQVQR LSVGSIPRSM KVILEDDLVD SCKSGDDLTI YGIVMQRWKP ENSBTAP00000002665/1-1139 EIKIQEQVQR LSVGSIPRSM QVILEDDLVD SCKSGDDITI YGVVMQRWKP bmy_12454T0/1-731 ---------- ---------- ---------- ---------- ---------- BACU014260/1-1034 EIKIQEQVQR LSVGSIPRTM KVILEDDLVD SCKSGDDLTI YGVVMQRWKP 251 300 ENSP00000314505/1-1143 FQQDVRCEVE IVLKANYIQV NNEQSSGIIM DEEVQKEFED FWEYYKSDPF ENSBTAP00000002665/1-1139 FKQDVRCEVE IVLKANYIQV NNEESAGVNM DEEVRKEFED FWEHYKSDPF bmy_12454T0/1-731 ---------- ---------- ---------- ---------- ---------- BACU014260/1-1034 FQQDVRCEVE IVLKANYIQV NNEQSAGINM DEEVRKEFED FWEYYKSDPF 301 350 ENSP00000314505/1-1143 AGRNVILASL CPQVFGMYLV KLAVAMVLAG GIQRTDATGT RVRGESHLLL ENSBTAP00000002665/1-1139 AGRNEILASL CPQVFGMYLV KLAVAMVLAG GIQRTDATGT RVRGESHLLL bmy_12454T0/1-731 ---------- ---------- ---------- -------MGS RSR------- BACU014260/1-1034 AGRNEILASL CPQVFGMYLV KLAVAMVLAG GIQRTDATGT RVRGESHLLL 351 400 ENSP00000314505/1-1143 VGDPGTGKSQ FLKYAAKITP RSVLTTGIGS TSAGLTVTAV KDSGEWNLEA ENSBTAP00000002665/1-1139 VGDPGTGKSQ FLKYAAKITP RSVLTTGIGS TSAGLTVTAV KDSGEWNLEA bmy_12454T0/1-731 ---------- ---------- -----NGLGN FNCGSTC--- -----W---- BACU014260/1-1034 VGDPGTGKSQ FLKYAAKITP RSVLTTGIGS TSAGLTVTAV KDSGEWNLEA 401 450 ENSP00000314505/1-1143 GALVLADAGL CCIDEFNSLK EHDRTSIHEA MEQQTISVAK AGLVCKLNTR ENSBTAP00000002665/1-1139 GALVLADAGL CCIDEFNSLK EHDRTSIHEA MEQQTISVAK AGLVCKLNTR bmy_12454T0/1-731 ---------- -C-----GLG QRRRTN---- ---------- --LVCKLNTR BACU014260/1-1034 GALVLADAGL CCIDEFNSLK EHDRTSIHEA MEQQTISVAK AGLVCKLNTR 451 500 ENSP00000314505/1-1143 TTILAATNPK GQYDPQESVS VNIALGSPLL SRFDLILVLL DTKNEDWDRI ENSBTAP00000002665/1-1139 TTILAATNPK GQYDPRESVS VNIALSSPLL SRFDLILVLL DTKNEDWDRI bmy_12454T0/1-731 TTILAATNPK GQYDPHESVS VNIALGSPLL SRFDLILVLL DTKNEDWDRV BACU014260/1-1034 TTILAATNPK GQYDPHESVS VNIALGSPLL SRFDLILVLL DTKNEDWDRI 501 550 ENSP00000314505/1-1143 ISSFILENKG YPSKSEKLWS MEKMKTYFCL IRNLQPTLSD VGNQVLLRYY ENSBTAP00000002665/1-1139 ISSFILENKG YPSKSEKLWS MEKMKSYFCL IRKLQPTLSD EGNQVLLRYY bmy_12454T0/1-731 ISAFILENKG YPSKSEKLWS MEKMKTYFCL IRNLQPTLSD EGNQVLLRYY BACU014260/1-1034 ISAFILENKG YPSKSEKLWS MEKMKTYFCL IRNLQPTLSD EGNQVLLRYY 551 600 ENSP00000314505/1-1143 QMQRQSDCRN AARTTIRLLE SLIRLAEAHA RLMFRDTVTL EDAITVVSVM ENSBTAP00000002665/1-1139 QMQRQSDSRN AARTTIRLLE SLIRLAEAHA RLMFRDTVTL EDAVTVVSVM bmy_12454T0/1-731 QMQRQSNSRN AARTTIRLLE SLIRLAEAHA RLMFRDTVTL EDAITVVSVM BACU014260/1-1034 QMQRQSDSRN AARTTIRLLE SLIRLAEAHA RLMFRDTVTL EDAITVVSVM 601 650 ENSP00000314505/1-1143 ESSMQGGALL GGVNALHTSF PENPGEQYQR QCELILEKLE LQSLLSEELR ENSBTAP00000002665/1-1139 ESSMQGGALL GGVNALHTSF PENPLQQYQT QCELILEKLE LPNLLSEELR bmy_12454T0/1-731 ESSMQGGALL GGVNALHTSF PDNPLEQYQK QCELILEKLE LHSLLSEELR BACU014260/1-1034 ESSMQGGALL GGVNALHTSF PDNPLEQYQK QCELILEKLE LHSLLSEELR 651 700 ENSP00000314505/1-1143 RLERLQNQSV HQSQPRVLEV ETTPGSLRNG PGEESNFRTS SQQEINYSTH ENSBTAP00000002665/1-1139 RLERLQNWSV DQSQPQAMEA ETIPGSLGGD ARKESNFRTS TQQEVNCSAH bmy_12454T0/1-731 RLERLQNQSV CQHQPRAMEA ETTSGSLRDD PGEESKLRPS AQQEVNCSTH BACU014260/1-1034 RLES------ ---------- ---------- ---------- ---------- 701 750 ENSP00000314505/1-1143 IFSPGGSPEG SPVLDPPPHL EPNRSTSRKH SAQHKNNRDD SLDWFDFMAT ENSBTAP00000002665/1-1139 RFSIGGSFGG SPLLGPSSHL GPKGPASGKH SEEHRNSQDG SLDWFDSVAT bmy_12454T0/1-731 LSSTGGRPGG SPLLNPPSHL GPDRLTSRRH SAEHRNSQDD SLDWFDSIAT BACU014260/1-1034 ---------- ---------- ---------- ---------- ---------- 751 800 ENSP00000314505/1-1143 HQSEPKNTVV VSPHPKTSGE NMASKISNST SQGKEKSEPG QRSKVDIGLL ENSBTAP00000002665/1-1139 HPIEPKNTAP VSPSPKTSRG AMALKICNNR SQGKEDREAG QRSKLETEPL bmy_12454T0/1-731 HPMEPKNTVP VSPSPKTSGG EMALKISHNK SQGKEKREPG QRSKLETGPL BACU014260/1-1034 ---------- ----PKTSGG EMALKISHNK SQGKEKREPR QGSKLETGPL 801 850 ENSP00000314505/1-1143 PSPGETGVPW RADNVESNKK KRLALDSEAA VSADKPDSVL THHVPRNLQK ENSBTAP00000002665/1-1139 PAAGETETPL RPGNREGERP RKAATVSEAA VSADEPDSVL THHVPRKLHK bmy_12454T0/1-731 PTPAETEAPL RPDSLEGEKA KKAAMVSEAA VSADEPDSVL IHHVPRKLHE BACU014260/1-1034 PTPAETEAPL RPDSLEGEKA KKAAMVSEAA VSADEPDSVL IHHVPRKLHK 851 900 ENSP00000314505/1-1143 LCKERAQKLC RNSTRVPAQC TVPSHPQSTP VHSPDRMLDS PKRKRPKSLA ENSBTAP00000002665/1-1139 LHKARAQELC RNPTRPPLQP TSPSHPQPTP IQSPERVLET PKRKRQKSHA bmy_12454T0/1-731 LRKERAQELC RKPARPPSQP TSPPHPRPTS VQSPERVLGT PKRKRQKSLA BACU014260/1-1034 LRKERAQELY RKPARPPSQP TSPPHPRPTP VQSPERVLGN TKRKRQKSLA 901 950 ENSP00000314505/1-1143 QVEEPAIENV KPPGSPVAKL AKFTFKQKSK LIHSFEDHSH VSPGATKIAV ENSBTAP00000002665/1-1139 QAQEPHQESV ESLGAPVAKL AKFTFKQKSK LTHSPEDRGP VSPGTSKPVV bmy_12454T0/1-731 RVQEPHLESV ESPGPPVAKL AKFTFKQKSK LTHSPEDCSH VSPGTSKTAV BACU014260/1-1034 RVQEPHLESV ESPGPPVAKL AKFTFKQKSK LTHSPEDCSH VSPGTSKTAV 951 1000 ENSP00000314505/1-1143 HSPKISQRRT RRDAALPVKR PGKLTSTPGN QISSQPQGET KEVSQQPPEK ENSBTAP00000002665/1-1139 QSPENPQRRA KRGAALPGKG PEKLASR--I RSSAQPQDET RGVSPQPPYK bmy_12454T0/1-731 QSPEIPQRRA RGKAALPGKG PEKLASTSEI RSPAQLQGKT KEVSRQPPDK BACU014260/1-1034 QSPEIPQRRA RGKAALPGKG AEKLASTSEI RSPAQLQDKT KEVSRQPPDK 1001 1050 ENSP00000314505/1-1143 HGPREKVMCA PEKRIIQPEL ELGNETGCAH LTCEGDKKEE VSGSNKSGKV ENSBTAP00000002665/1-1139 DRPEEKRERA PAKGTVQPEL ELGNDMGRFF LASERVRKEE VSCSNKSSKV bmy_12454T0/1-731 DGPREKXECA PAKGAVQPEL ELGSITGRFH LASERDRKEE VSCHSKSGKV BACU014260/1-1034 DGPREKRERA PAKGAVQPEL ELGSNSGRFH LASERDRKEE VSCHSKSGKV 1051 1100 ENSP00000314505/1-1143 HACTLARLAN FCFTPPSESK SKS-PPPERK NRGERGPSSP PTTTAPMRVS ENSBTAP00000002665/1-1139 HACTLAKLAN FSFTSPSESK SESPPPPQSK NPSEGGPSC- -VATATALGR bmy_12454T0/1-731 HACTLARLAN FSFTSPSESK SESLPPPESK NPGEGGPSPL LVTAATVLGR BACU014260/1-1034 HACTLARLAD FSFTSPSESK SESLPPPESK NPGEGGPSPL LVTAATVLGR 1101 1150 ENSP00000314505/1-1143 KRKSFQLRGS TEKLIVSKES LFTLPELGDE AFDCDWDEEM RKKS ENSBTAP00000002665/1-1139 KRKTFQLDTS TEKLSLSKTS LFTLPELDDE PLDFDWDEEM RKKP bmy_12454T0/1-731 KRKTFQLGGS TERLSLSKTS LFTLPELDDE PLDFDWDEEM RKKP BACU014260/1-1034 KRKTFQLGGS TERLSLSKTS LFTLPELDDE PLDFDWDEEM RKKP