KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:43 2014 Check: 00 .. Name: ENSP00000201031/1-450 Len: 463 Check: 800 Weight: 1.00 Name: ENSBTAP00000002671/1-450 Len: 463 Check: 2097 Weight: 1.00 Name: ENSTTRP00000005657/1-450 Len: 463 Check: 558 Weight: 1.00 Name: bmy_00239T0/1-463 Len: 463 Check: 1263 Weight: 1.00 Name: BACU011299/1-404 Len: 463 Check: 4414 Weight: 1.00 // 1 50 ENSP00000201031/1-450 MLWKITDNVK YEEDC----- --------ED RHDGSSNGNP RVPHLSSAGQ ENSBTAP00000002671/1-450 MLWKITDNVK YEEDC----- --------ED RHDASSNGNP RLPHLSSAGQ ENSTTRP00000005657/1-450 MLWKITDNVK YEEDC----- --------ED RHDASSNGNP RLPHLSSAGQ bmy_00239T0/1-463 MLWKITDNVK YEEDLAGFRT NRVSVSLPQD RHDASSNGNP RLPHLSSAGQ BACU011299/1-404 MLWKITDNVK YEEDC----- --------ED RHDASSNGNP RLPHLSSAGQ 51 100 ENSP00000201031/1-450 HLYSPAPPLS HTGVAEYQPP PYFPPPYQQL AYSQSADPYS HLGEAYAAAI ENSBTAP00000002671/1-450 HLYSPAPPLS HTGVAEYQPP PYFPPPYQQL AYSQSADPYS HLGEAYAAAI ENSTTRP00000005657/1-450 HLYSPAPPLS HAGVAEYQPP PYFPPPYQQL AYSQAADPYS HLGEAYAAAI bmy_00239T0/1-463 HLYSPAPPLS HAGVAEYQPP PYFPPPYQQL AYSQAADPYS HLGEAYAAAI BACU011299/1-404 HLYSPAPPLS HAGVAEYQPP PYFPPPYQQL AYSQAADPYS HLGEAYAAAI 101 150 ENSP00000201031/1-450 NPLHQPAPTG SQQQAWPGRQ SQEGAGLPSH HGRPAGLLPH LSGLEAGAVS ENSBTAP00000002671/1-450 NPLHQPAPTS SQPQAWPGRQ SQEGAGLPSH HGRPAGLLPH LSGLDGGAVS ENSTTRP00000005657/1-450 NPLHQPAPTG SQQQAWPGRQ SQEGAGLPSH HARPAGLLPH LSGLDGGAVS bmy_00239T0/1-463 NPLHQPAPTG SQQQAWPGRQ SQEGAGLPSH HARPAGLLPH LSGLDGGAVS BACU011299/1-404 NPLHQPAPTG SQQQAWPGRQ SQEGAGLPSH HARPAGLLPH LSGLD----- 151 200 ENSP00000201031/1-450 ARRDAYRRSD LLLPHAHALD AAGLAENLGL HDMPHQMDEV QNVDDQHLLL ENSBTAP00000002671/1-450 ARREAYRRSD LLLPHSHALD AAGLAENLGL HDMAHQMEEV QNVDDQHLLL ENSTTRP00000005657/1-450 ARRDAYRRSD LLLPHSHALD AAGLAENLGL HDMAHQMEEV QNVDDQHLLL bmy_00239T0/1-463 ARRDAYRRSD LLLPHSHALD AAGLAENLGL HDVAQQMEEV QNVDDQHLLL BACU011299/1-404 ---------- ---------- ---------- ---------- -SVDDQHLLL 201 250 ENSP00000201031/1-450 HDQTVIRKGP ISMTKNPLNL PCQKELVGAV MNPTEVFCSV PGRLSLLSST ENSBTAP00000002671/1-450 HDQTVIRKGP ISMTKNPLSL PCQKELVGAV MNPSEVFCSV PGRLSLLSST ENSTTRP00000005657/1-450 HDQTVIRKGP ISMTKNPLSL PCQKELVEAV MNPSEVFCSV PGRLSLLSST bmy_00239T0/1-463 HDQTVIRKGP ISMTKNPLSL PCQKELVEAV MNPSEVFCSV PGRLSLLSST BACU011299/1-404 HDQTVIRKGP ISMTKNPLSL PCQKELVEAV MNPSEVFCSV PGRLSLLSST 251 300 ENSP00000201031/1-450 SKYKVTVAEV QRRLSPPECL NASLLGGVLR RAKSKNGGRS LREKLDKIGL ENSBTAP00000002671/1-450 SKYKVTVAEV QRRLSPPECL NASLLGGVLR RAKSKNGGRS LREKLDKIGL ENSTTRP00000005657/1-450 SKYKVTVAEV QRRLSPPECL NASLLGGVLR RAKSKNGGRS LREKLDKIGL bmy_00239T0/1-463 SKYKVTVAEV QRRLSPPECL NASLLGGVLR RAKSKNGGRS LREKLDKIGL BACU011299/1-404 SKYKVTVAEV QRRLSPPECL NASLLGGVLR RAKSKNGGRS LREKLDKIGL 301 350 ENSP00000201031/1-450 NLPAGRRKAA HVTLLTSLVE GEAVHLARDF AYVCEAEFPS KPVAEYLTRP ENSBTAP00000002671/1-450 NLPAGRRKAA HVTLLTSLVE GEAVHLARDF AYVCEAEFPS KSVAEYLTRP ENSTTRP00000005657/1-450 NLPAGRRKAA HVTLLTSLVE GEAVHLARDF AYVCEAEFPS KSVAEYLTRP bmy_00239T0/1-463 NLPAGRRKAA HVTLLTSLVE GEAVHLARDF AYVCEAEFPS KSVAEYLTRP BACU011299/1-404 NLPAGRRKAA HVTLLTSLVE GEAVHLARDF AYVCEAEFPS KSVAEYLTRP 351 400 ENSP00000201031/1-450 HLGGRNEMAA RKNMLLAAQQ LCKEFTELLS QDRTPHGTSR LAPVLETNIQ ENSBTAP00000002671/1-450 HLGGRNEIAT RKNMLLAAQQ VCKEFTDLLN QDRTPNGNNR PTPVLETNIQ ENSTTRP00000005657/1-450 HLGGRNEMAT RKNMLLAAQQ VCKEFTDLLN QDRTPNGNNR PTPVLETSIQ bmy_00239T0/1-463 HLGGRNEMAT RKNMLLAAQQ VCKEFTDLLN QDRTPNGNNR PTPVLETSIQ BACU011299/1-404 HLGGRNEMAT RKNMLLAAQQ VCKEFTDLLN QDRTPNGNNR PTPVLETSIQ 401 450 ENSP00000201031/1-450 NCLSHFSLIT HGFGSQAICA AVSALQNYIK EALIVIDKSY MNPGDQSPAD ENSBTAP00000002671/1-450 NCLSHFSLIT HGFGSQAICA AVSAVQNYIK EALIVIDKSY MNPGDQSPAD ENSTTRP00000005657/1-450 NCLSHFSLIT HGFGSQAICA AVSAMQNYIK EALMVIDKSY MNPGDQSPAD bmy_00239T0/1-463 NCLSHFSLIT HGFGSQAICA AVSAVQNYIK EALMVIDKSY MNPGDQSPAD BACU011299/1-404 NCLSHFSLIT HGFGSQAICA AVSAVQNYIK EALMVIDKSY MNPGDQSPAD 451 500 ENSP00000201031/1-450 SNKTLEKMEK HRK ENSBTAP00000002671/1-450 SSKTLEKLEK HRK ENSTTRP00000005657/1-450 SSKTLEKMEK HRK bmy_00239T0/1-463 SSKALEKMEK HRK BACU011299/1-404 SSKALEKMEK HRK