KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:47 2014 Check: 00 .. Name: ENSTTRP00000008760/1-570 Len: 570 Check: 3123 Weight: 1.00 Name: ENSP00000428756/1-570 Len: 570 Check: 4643 Weight: 1.00 Name: bmy_02178T0/1-288 Len: 570 Check: 1307 Weight: 1.00 Name: BACU011150/1-370 Len: 570 Check: 6302 Weight: 1.00 Name: ENSBTAP00000002684/1-251 Len: 570 Check: 6572 Weight: 1.00 // 1 50 ENSTTRP00000008760/1-570 MANPKEKTPM CLVNELARFN RVQPQYKLLK ERGPAHSKMF SVQLSLGEQT ENSP00000428756/1-570 MANPKEKTAM CLVNELARFN RVQPQYKLLN ERGPAHSKMF SVQLSLGEQT bmy_02178T0/1-288 ---------- ---------- ---------- ---------- ---------- BACU011150/1-370 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002684/1-251 ---------- ---------- ---------- ---------- ---------- 51 100 ENSTTRP00000008760/1-570 WESEGSSIKK AQQAVANKAL TESTLPKPVQ KPPKSSVNNN PGSITPTVEL ENSP00000428756/1-570 WESEGSSIKK AQQAVANKAL TESTLPKPVQ KPPKSNVNNN PGSITPTVEL bmy_02178T0/1-288 ---------- ---------- ---------- ---------- ---------- BACU011150/1-370 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002684/1-251 ---------- ---------- ---------- ---------- ---------- 101 150 ENSTTRP00000008760/1-570 NGLAMKRGEP AIYRPLDPKP FPNYRANYNF RGMYNQXXXX XXXXXXXXXX ENSP00000428756/1-570 NGLAMKRGEP AIYRPLDPKP FPNYRANYNF RGMYNQRYHC PVPKIFYVQL bmy_02178T0/1-288 ---------- ---------- ---------- ---------- -MPKIFYVQL BACU011150/1-370 ---------- ---------- ---------- ---------- -MPKIFYVQL ENSBTAP00000002684/1-251 ---------- ---------- ---------- ------RYHC PVPKIFYVQL 151 200 ENSTTRP00000008760/1-570 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX NGESGKEMDD ENSP00000428756/1-570 TVGNNEFFGE GKTRQAARHN AAMKALQALQ NEPIPERSPQ NGESGKDVDD bmy_02178T0/1-288 TVGNNEFFGE GKTRQAARHN AAMKALQALQ NEPIPEKSAQ NGESGKEMDD BACU011150/1-370 TVGNNEFFGE GKTRQAARHN AAMKALQALQ NEPIPEKSAQ NGESGKEMDD ENSBTAP00000002684/1-251 TVGNNEFFGE GKTRQAARHN AAMKALQALQ NEPIPEKSAQ NCESGKEMDD 201 250 ENSTTRP00000008760/1-570 DKDANKSEIS LVFEIALKRN MPVSFEVIKE SGPPHMKSFV TRVSVGEFSA ENSP00000428756/1-570 DKDANKSEIS LVFEIALKRN MPVSFEVIKE SGPPHMKSFV TRVSVGEFSA bmy_02178T0/1-288 DKDANKSEIS LVFEIALKRN MPVSFEVIKE SGPPHMKSFV TRVSVGEFSA BACU011150/1-370 DKDANKSEIS LVFEIALKRN MPVSFEVIKE SGPPHMKSFV TRVSVGEFSA ENSBTAP00000002684/1-251 DKDANKSEIS LVFEIALKRN MPVSFEVIKE SGPPHMKSFV TRVSVGEFSA 251 300 ENSTTRP00000008760/1-570 EGEGNSKKLS KKRAATTVLQ ELKKLPPLPV VEKPKLFFKK RPKTIVKAGP ENSP00000428756/1-570 EGEGNSKKLS KKRAATTVLQ ELKKLPPLPV VEKPKLFFKK RPKTIVKAGP bmy_02178T0/1-288 EGEGNSKKLS KKRAATTVLQ ELKKLPPLPV VEKPKLFFKK RPKTIVKAGP BACU011150/1-370 EGEGNSKKLS KKRAATTVLQ ELKKLPPLPV VEKPKLFFKK RPKTIVKAGP ENSBTAP00000002684/1-251 EGEGNSKKLS KKRAATTVLQ ELKKLPPLPV VEKPKLFFKK RPKTIVKAGP 301 350 ENSTTRP00000008760/1-570 EYGQGMNPIS RLAQIQQAKK EKEPDYVLLS ERGMPRRREF VMQVKVGNEV ENSP00000428756/1-570 EYGQGMNPIS RLAQIQQAKK EKEPDYVLLS ERGMPRRREF VMQVKVGNEV bmy_02178T0/1-288 EYGQGMNPIS RLAQIQQAKK EKEPDYVLLS ERGMPRRREF VMQVKVGNEV BACU011150/1-370 EYGQGMNPIS RLAQIQQAKK EKEPDYVLLS ERGMPRRREF VMQVKVGNEV ENSBTAP00000002684/1-251 EYGQGMNPIS RLAQIQQAKK EKEPDYVLLS ERGMPRRREF VMQVKVGNEV 351 400 ENSTTRP00000008760/1-570 ATGTGPNKKI AKKNAAEAML LQLGYKASTS LQDQLDKTGE NKGWSGPKAG ENSP00000428756/1-570 ATGTGPNKKI AKKNAAEAML LQLGYKASTN LQDQLEKTGE NKGWSGPKPG bmy_02178T0/1-288 ATGTGPNKKI AKKNAAEAML LQLGYKASTS LQDQLDKVRV KFTWT----- BACU011150/1-370 ATGTGPNKKI AKKNAAEAML LQLGYKASTS LQDQLDKTGE NKGWSGPKAG ENSBTAP00000002684/1-251 ATGTGPNKKI AKKNAAEAML LQLGYKASTS LQDQLDK--- ---------- 401 450 ENSTTRP00000008760/1-570 FPEPTNNTPK GILHLSPDVY QEMEASRHKV ISGTALGYLS PKDMNQPSSS ENSP00000428756/1-570 FPEPTNNTPK GILHLSPDVY QEMEASRHKV ISGTTLGYLS PKDMNQPSSS bmy_02178T0/1-288 ---------- ---------- ---------- -SSILSGYKS DEQI------ BACU011150/1-370 FPEPTNNTPK GILHLSPDVY QEMEASRHKV ISGTTLGYLS PKDMNQPSSS ENSBTAP00000002684/1-251 ---------- ---------- ---------- ---------- ---------- 451 500 ENSTTRP00000008760/1-570 FFSISPTSSS SATIARELLM NGTSPTAEAI GLKGSSPPPP CSPVQPSKQL ENSP00000428756/1-570 FFSISPTSNS SATIARELLM NGTSSTAEAI GLKGSSPTPP CSPVQPSKQL bmy_02178T0/1-288 --------LS QCSLTLSTVL TGVKVDVKF- ---------- ---------- BACU011150/1-370 FFSISPTSSS SATIARELLM NGTSPTAEAI GLKGSSPTPP CSPVQPSKQL ENSBTAP00000002684/1-251 ---------- ---------- ---------- ---------- ---------- 501 550 ENSTTRP00000008760/1-570 EYLARIQGFQ AALSALKQFS EQGLDPMEGA MNIEKASLEK QAQHLGEKAD ENSP00000428756/1-570 EYLARIQGFQ AALSALKQFS EQGLDPIDGA MNIEKGSLEK QAKHLREKAD bmy_02178T0/1-288 ---------- ---------- ---------- ---------- ---------- BACU011150/1-370 EYLARIQGFQ V--------- ---------- ---------- ---------- ENSBTAP00000002684/1-251 ---------- ---------- ---------- ---------- ---------- 551 600 ENSTTRP00000008760/1-570 NNQTHPGSIA QDCKKSRSVI ENSP00000428756/1-570 NNQAPPGSIA QDCKKSNSAV bmy_02178T0/1-288 ---------- ---------- BACU011150/1-370 ---------- ---------- ENSBTAP00000002684/1-251 ---------- ----------