KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:48 2014 Check: 00 .. Name: ENSTTRP00000002230/1-1069 Len: 1072 Check: 2781 Weight: 1.00 Name: ENSP00000361473/1-1064 Len: 1072 Check: 1304 Weight: 1.00 Name: ENSBTAP00000002687/1-1066 Len: 1072 Check: 7443 Weight: 1.00 Name: bmy_16626T0/1-900 Len: 1072 Check: 1821 Weight: 1.00 Name: BACU000354/1-1072 Len: 1072 Check: 8364 Weight: 1.00 // 1 50 ENSTTRP00000002230/1-1069 MASESETLNP SARIMTFYPT MEEFRNFSRY IAYIESQGAH RAGLAKXXXX ENSP00000361473/1-1064 MASESETLNP SARIMTFYPT MEEFRNFSRY IAYIESQGAH RAGLAKVVPP ENSBTAP00000002687/1-1066 MASESETLNP SARIMTFYPT MEEFRNFSRY IAYIESQGAH RAGLAKVVPP bmy_16626T0/1-900 MASESETLNP SARIMTFYPT MEEFRNFSRY IAYIESQGAH RAGLAKVVPP BACU000354/1-1072 MASESETLNP SARIMTFYPT MEEFRNFSRY IAYIESQGAH RAGLAKVVPP 51 100 ENSTTRP00000002230/1-1069 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSP00000361473/1-1064 KEWKPRASYD DIDDLVIPAP IQQLVTGQSG LFTQYNIQKK AMTVREFRKI ENSBTAP00000002687/1-1066 KEWKPRASYD DIDDLVIPAP IQQLVTGQSG LFTQYNIQKK AMTVREFRKI bmy_16626T0/1-900 KEWKPRASYD DIDDLVIPAP IQQLVTGQSG LFTQYNIQKK AMTVREFRKI BACU000354/1-1072 KEWKPRASYD DIDDLVIPAP IQQLVTGQSG LFTQYNIQKK AMTVREFRKI 101 150 ENSTTRP00000002230/1-1069 XXXXXYCTPR YSEFEELERK YWKNLTFNPP IYGADVNGTL YEKHVDEWNI ENSP00000361473/1-1064 ANSDKYCTPR YSEFEELERK YWKNLTFNPP IYGADVNGTL YEKHVDEWNI ENSBTAP00000002687/1-1066 ANSDKYCTPR YSEFEELERK YWKNLTFNPP IYGADVNGTL YEKHVDEWNI bmy_16626T0/1-900 ANSDKC---- ---------- ---------- ---------- ---------- BACU000354/1-1072 ANSDKYCTPR YSEFEELERK YWKNLTFNPP IYGADVNGTL YEKHVDEWNI 151 200 ENSTTRP00000002230/1-1069 GRLKTILDLV EKESGITIEG VNTPYLYFGM WKTSFAWHTE DMDLYSINYL ENSP00000361473/1-1064 GRLRTILDLV EKESGITIEG VNTPYLYFGM WKTSFAWHTE DMDLYSINYL ENSBTAP00000002687/1-1066 GRLRTILDLV EKESGITIEG VNTPYLYFGM WKTSFAWHTE DMDLYSINYL bmy_16626T0/1-900 ---------- ---------- ---------- ---------- ----YLISFV BACU000354/1-1072 GRLKTILDLV EKESGITIEG VNTPYLYFGM WKTSFAWHTE DMDLYSINYL 201 250 ENSTTRP00000002230/1-1069 HFGEPKSWYS VPPEHGKRLE RLAKGFFPGS AQSCEAFLRH KMTLISPLML ENSP00000361473/1-1064 HFGEPKSWYS VPPEHGKRLE RLAKGFFPGS AQSCEAFLRH KMTLISPLML ENSBTAP00000002687/1-1066 HFGEPKSWYS VPPEHGKRLE RLAKGFFPGS AQSCEAFLRH KMTLISPLML bmy_16626T0/1-900 ---------- ---------- ---------- ---------- TLTKCTP--- BACU000354/1-1072 HFGEPKSWYS VPPEHGKRLE RLAKGFFPGS AQSCEAFLRH KMTLISPLML 251 300 ENSTTRP00000002230/1-1069 KKYGIPFDKV TQEAGEFMIT FPYGYHAGFN HGFNCAESTN FATRRWIEYG ENSP00000361473/1-1064 KKYGIPFDKV TQEAGEFMIT FPYGYHAGFN HGFNCAESTN FATRRWIEYG ENSBTAP00000002687/1-1066 KKYGIPFDKV TQEAGEFMIT FPYGYHAGFN HGFNCAESTN FATRRWIEYG bmy_16626T0/1-900 -------SRL STESG----- ---------- ---------- -----WSAWP BACU000354/1-1072 KKYGIPFDKV TQEAGEFMIT FPYGYHAGFN HGFNCAESTN FATRRWIEYG 301 350 ENSTTRP00000002230/1-1069 KQAVLCSCRK DMVKISMDVF VRKFQPERYK LWKAGKDSTV IDHTLPTPEA ENSP00000361473/1-1064 KQAVLCSCRK DMVKISMDVF VRKFQPERYK LWKAGKDNTV IDHTLPTPEA ENSBTAP00000002687/1-1066 KQAVLCSCRK DMVKISMDVF VRKFQPERYK LWKAGKDSTV IDHTLPTPEA bmy_16626T0/1-900 K----CSCRK DMVKISMDVF VRKFQPERYK LWKAGKDSTV IDHTLPTPEA BACU000354/1-1072 KQAVLCSCRK DMVKISMDVF VRKFQPERYK LWKAGKDSTV IDHTLPTPEA 351 400 ENSTTRP00000002230/1-1069 AEFLKESELA PRARKEEECP EEDDMEGVED GEEGDLKRSL AKHRIGTKRH ENSP00000361473/1-1064 AEFLKESELP PRAGNEEECP EE-DMEGVED GEEGDLKTSL AKHRIGTKRH ENSBTAP00000002687/1-1066 AEFLKESELA LRARKEEDCP EEEETEGVED GEEGDLKRSL AKHRIGTKRH bmy_16626T0/1-900 AEFLKESELA PRARKEEECP EEDDMEGVED GEEGDLKRSL AKHRIGTKRH BACU000354/1-1072 AEFLKESELA PRARKEEECP EEDDMEGVED GEEGDLKRSL AKHRIGTKRH 401 450 ENSTTRP00000002230/1-1069 RVCLEIPQEV SQSELFPREE LGSGQYDMAE CQAALAPVRP THSSVRQVED ENSP00000361473/1-1064 RVCLEIPQEV SQSELFPKED LSSEQYEMTE CPAALAPVRP THSSVRQVED ENSBTAP00000002687/1-1066 RVCLEIPQEV SQSELFPKEE LGSGQYDMAE CQAALSPVRP THSSVRQVED bmy_16626T0/1-900 RVCLEIPQEV SQSELFPREE LGSGQYDMAE CQAALAPVRP THSSVRQVED BACU000354/1-1072 RVCLEIPQEV SQSELFPREE LGSGQYDMAE CQAALAPVRP THSSVRQVED 451 500 ENSTTRP00000002230/1-1069 SLTFPDYSDS TEVKFEELKN VKLEEEEEEE EED---QDQE AAALDLSVNP ENSP00000361473/1-1064 GLTFPDYSDS TEVKFEELKN VKLEEEDEEE E-------QA AAALDLSVNP ENSBTAP00000002687/1-1066 SLTFPDYSDS TEVKFEELKN VKLEEDDEDE EEE-----HE AAVLDLSVNP bmy_16626T0/1-900 GLTFPDYSDS TEVKFEELKN VKLEEEDEEE EEEEEEEDQE AAALDLSVNP BACU000354/1-1072 GLTFPDYSDS TEVKFEELKN VKLEEEDEEE EEEEEEEDQE GAALDLSVNP 501 550 ENSTTRP00000002230/1-1069 VSFGGRLVFS GSKKKSSSSL GSGSSRDSIS SDSETSEPLS CRAPGQTGVL ENSP00000361473/1-1064 ASVGGRLVFS GSKKKSSSSL GSGSSRDSIS SDSETSEPLS CRAQGQTGVL ENSBTAP00000002687/1-1066 ASL-GRLVFS GSKEKSSSSL GSGSSQDSVS SDSETSEPLS CRAQGQTGVL bmy_16626T0/1-900 VSFGGRLVFS GSKKKSSSSL GSGSSRDSIS SDSETSEPLS CRAQGQTGVL BACU000354/1-1072 VSFGGRLVFS GSKKKSSSSL GSGSSRDSIS SDSETSEPLS CRAQGQTGVL 551 600 ENSTTRP00000002230/1-1069 TVHSYAKGDD RVTAGESCTR KKGGATRSIN ERELAEVADE YMFSLEESKK ENSP00000361473/1-1064 TVHSYAKGDG RVTVGEPCTR KKGSAARSFS ERELAEVADE YMFSLEENKK ENSBTAP00000002687/1-1066 TVHSYARGDG RVLPGEPCAR KKGGATRSIS ERELAEVADE YMFSLEESKK bmy_16626T0/1-900 TVHSYAKGDD RVTAGESCTR KKGGATRSIN ERELAEVADE YMFSLEESKK BACU000354/1-1072 TVHSYAKGDD RVTAGESCTR KKGGATRSIN ERELAEVADE YMFSLEESKK 601 650 ENSTTRP00000002230/1-1069 SKGRRQPLSK LPRHHPLVLQ DCVSDDDVSE QGTLEEEAEE TEAWAKPLSQ ENSP00000361473/1-1064 SKGRRQPLSK LPRHHPLVLQ ECVSDDETSE QLTPEEEAEE TEAWAKPLSQ ENSBTAP00000002687/1-1066 SKGRRQPLSK LPRHHPLVLQ DCVSDDELPE QLTPEEEAEE TEAWAKPLSQ bmy_16626T0/1-900 SKGRRQPLSK LPRHHPLVLQ DCVSDDDVSE QGTPEEEAEE TEAWAKPLSQ BACU000354/1-1072 SKGRRQPLSK LPRHHPLVLQ DCVSDDDVSE QGTPEEEAEE TEAWAKPLSQ 651 700 ENSTTRP00000002230/1-1069 LWQNRPPNFE AEKEFNEAMA QQAPHCAVCM IFQTYHQVEF GSLSQNCGSA ENSP00000361473/1-1064 LWQNRPPNFE AEKEFNETMA QQAPHCAVCM IFQTYHQVEF GGFNQNCGNA ENSBTAP00000002687/1-1066 LWQNRPPNFE AEKEFNEAMA QQAPHCAVCM IFQTYHQVEF GGFGQSCGSA bmy_16626T0/1-900 LWQNRPPNFE AEKEFNEAMA QQAPHCAVCM IFQTYHQVEF GSLSQNCGSA BACU000354/1-1072 LWQNRPPNFE AEKEFNEAMA QQAPHCAVCM IFQTYHQVEF GSLSQNCGSA 701 750 ENSTTRP00000002230/1-1069 PDLAPQKQRT KPLIPEMCFT STGCSTDINL STPYLEEDGT SILVSCKKCS ENSP00000361473/1-1064 SDLAPQKQRT KPLIPEMCFT STGCSTDINL STPYLEEDGT SILVSCKKCS ENSBTAP00000002687/1-1066 PDLAPQTQRT KPLIPEMCFT STGCSTDINL STPYLEEDGT SLLVSCKKCS bmy_16626T0/1-900 PDLAPQKQRT KPLIPEMCFT STGCSTDINL STPYLEEDGT SILVSCKKCS BACU000354/1-1072 PDLAPQKQRT KPLIPEMCFT STGCSTDINL STPYLEEDGT SILVSCKKCS 751 800 ENSTTRP00000002230/1-1069 VRVHASCYGV PPAKASEDWM CSRCSANALE EDCCLCSLRG GALQRANDDR ENSP00000361473/1-1064 VRVHASCYGV PPAKASEDWM CSRCSANALE EDCCLCSLRG GALQRANDDR ENSBTAP00000002687/1-1066 VRVHASCYGV PPAKASEDWM CSRCSANALE EDCCLCSLRG GALQRANDDR bmy_16626T0/1-900 VRVHASCYGV PPAKASEDWM CSRCSANALE EDCCLCSLRG GALQRANDDR BACU000354/1-1072 VRVHASCYGV PPAKASEDWM CSRCSANALE EDCCLCSLRG GALQRANDDR 801 850 ENSTTRP00000002230/1-1069 WVHVSCAVAI LEARFVNIAE RSPVDVSKIP LPRFKLKCVF CKKRRKRTAG ENSP00000361473/1-1064 WVHVSCAVAI LEARFVNIAE RSPVDVSKIP LPRFKLKCIF CKKRRKRTAG ENSBTAP00000002687/1-1066 WVHVSCAVAI LEARFVNIAE RSPVDVSKIP LPRFKLKCVF CKKRRKRTAG bmy_16626T0/1-900 WVHVSCAVAI LEARFVNIAE RSPVDVSKIP LPRFKLKCVF CKKRRKRTAG BACU000354/1-1072 WVHVSCAVAI LEARFVNIAE RSPVDVSKIP LPRFKLKCVF CKKRRKRTAG 851 900 ENSTTRP00000002230/1-1069 CCVQCSHGRC PTAFHVSCAQ AAGVMMQPDD WPFVVFITCF RHKIPNLERA ENSP00000361473/1-1064 CCVQCSHGRC PTAFHVSCAQ AAGVMMQPDD WPFVVFITCF RHKIPNLERA ENSBTAP00000002687/1-1066 CCVQCSHGRC PTAFHVSCAQ AAGVMMQPDD WPFVVFITCF RHKIPNLERA bmy_16626T0/1-900 CCVQCSHGRC PTAFHVSCAQ AAGVMMQPDD WPFVVFITCF RHKIPNLERA BACU000354/1-1072 CCVQCSHGRC PTAFHVSCAQ AAGVMMQPDD WPFVVFITCF RHKIPNLERA 901 950 ENSTTRP00000002230/1-1069 KGALQSITAG QKVISKHKNG RFYQCEVVRL TTETFYEVNF DDGSFSDNLY ENSP00000361473/1-1064 KGALQSITAG QKVISKHKNG RFYQCEVVRL TTETFYEVNF DDGSFSDNLY ENSBTAP00000002687/1-1066 KGALQSITAG QKVISKHKNG RFYQCEVVRL TTETFYEVNF DDGSFSDNLY bmy_16626T0/1-900 KGALQSITAG QKVISKHKNG RFYQCEVVRL TTETFYEVNF DDGSFSDNLY BACU000354/1-1072 KGALQSITAG QKVISKHKNG RFYQCEVVRL TTETFYEVNF DDGSFSDNLY 951 1000 ENSTTRP00000002230/1-1069 PEDIVSQDCL QLGPPAEGEV VQVRWTDGQV YGAKFVASHP IQMYQVEFED ENSP00000361473/1-1064 PEDIVSQDCL QFGPPAEGEV VQVRWTDGQV YGAKFVASHP IQMYQVEFED ENSBTAP00000002687/1-1066 PEDIVSQDCL QLGPPAEGEV VQVRWTDGQV YGAKFVASHP IQMYQVEFED bmy_16626T0/1-900 PEDIVSQDCL QLGPPAEGEV VQVRWTDGQV YGAKFVASHP IQMYQVEFED BACU000354/1-1072 PEDIVSQDCL QLGPPAEGEV VQVRWTDGQV YGAKFVASHP IQMYQVEFED 1001 1050 ENSTTRP00000002230/1-1069 GSQLVVKRDD VYTLDEELPK RVKSRLSVAS DMRFNEIFTE KEVKQEKKRQ ENSP00000361473/1-1064 GSQLVVKRDD VYTLDEELPK RVKSRLSVAS DMRFNEIFTE KEVKQEKKRQ ENSBTAP00000002687/1-1066 GSQLVVKRDD VYTLDEELPK RVKSRLSVAS DMRFNEIFTE KEVKQEKKRQ bmy_16626T0/1-900 GSQLVVKRDD VYTLDEELPK RVKSRLSVAS DMRFNEIFTE KEVKQEKKRQ BACU000354/1-1072 GSQLVVKRDD VYTLDEELPK RVKSRLSVAS DMRFNEIFTE KEVKQEKKRQ 1051 1100 ENSTTRP00000002230/1-1069 RVINSRYRED YIEPALYRAI ME ENSP00000361473/1-1064 RVINSRYRED YIEPALYRAI ME ENSBTAP00000002687/1-1066 RVINSRYRED YIEPALYRAI ME bmy_16626T0/1-900 RVINSRYRED YIEPALYRAI ME BACU000354/1-1072 RVINSRYRED YIEPALYRAI ME