KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:51 2014 Check: 00 .. Name: BACU011994/1-711 Len: 1444 Check: 4061 Weight: 1.00 Name: ENSTTRP00000013293/1-1260 Len: 1444 Check: 4316 Weight: 1.00 Name: bmy_00396T0/1-837 Len: 1444 Check: 9490 Weight: 1.00 Name: ENSP00000344087/1-1259 Len: 1444 Check: 5216 Weight: 1.00 Name: ENSBTAP00000002697/1-1016 Len: 1444 Check: 7819 Weight: 1.00 // 1 50 BACU011994/1-711 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013293/1-1260 -----RDHGL RKKRRSRSQR DRERRSRDGM GASAAGGGGA DRTRAPSFAS bmy_00396T0/1-837 ---------- ---------- ---------- ---------- ---------- ENSP00000344087/1-1259 MDGPTRGHGL RKKRRSRSQR DRERRSRGGL GAGAAGGGGA GRTRALSLAS ENSBTAP00000002697/1-1016 ---------- ---------- ---------- ---------- ---------- 51 100 BACU011994/1-711 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013293/1-1260 SSGSDKEDNG KPPSSAPSRP RPPRRKRRES TSAEEDIIDG FAMTSFVTFE bmy_00396T0/1-837 ---------- ---------- ---------- ---------- ---------- ENSP00000344087/1-1259 SSGSDKEDNG KPPSSAPSRP RPPRRKRRES TSAEEDIIDG FAMTSFVTFE ENSBTAP00000002697/1-1016 ---------- ---------- ---------- ---------- ---------- 101 150 BACU011994/1-711 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013293/1-1260 ALEKDVALKP QERVEKRQTP LTKKKREALT NGLSFHSKKS RLSHPHHYSS bmy_00396T0/1-837 ---------- ---------- ---------- ---------- ---------- ENSP00000344087/1-1259 ALEKDVALKP QERVEKRQTP LTKKKREALT NGLSFHSKKS RLSHPHHYSS ENSBTAP00000002697/1-1016 ---------- ---------- ---------- ---------- ---------- 151 200 BACU011994/1-711 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013293/1-1260 DRENDRNLCQ HLGKRKKMPK GLRQLKPGQN SCRDSDSESA SGESKGFHRS bmy_00396T0/1-837 ---------- ---------- ---------- ---------- ---------- ENSP00000344087/1-1259 DRENDRNLCQ HLGKRKKMPK ALRQLKPGQN SCRDSDSESA SGESKGFHRS ENSBTAP00000002697/1-1016 ---------- ---------- ---------- ---------- ---------- 201 250 BACU011994/1-711 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013293/1-1260 SSRERLSDSS APSSLGTGYF CDSDSDQEEK ASDAS----- ---------- bmy_00396T0/1-837 ---------- ---------- ---------- ---------- ---------- ENSP00000344087/1-1259 SSRERLSDSS APSSLGTGYF CDSDSDQEEK ASDASSEKLF NTVIVNKDPE ENSBTAP00000002697/1-1016 ---------- ---------- ---------- ---------- -------DPE 251 300 BACU011994/1-711 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013293/1-1260 ---------- ---------- ---------- ---------- ---------- bmy_00396T0/1-837 ----MIDRFQ GRDC------ -YGLE----- -EDVCVK--- ---------- ENSP00000344087/1-1259 LGVGTLPEHD SQDAGPIVPK ISGLERSQEK SQDCCKEPIF EPVVLKDPCP ENSBTAP00000002697/1-1016 LGVGALPHHD GHDAGPIVPK VSGLERSQEK SQDCGKEPLF EPVVLKDARP 301 350 BACU011994/1-711 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013293/1-1260 ---------- ---------- ---------- ---------- ---------- bmy_00396T0/1-837 ---------- ---------- ---------- ---------- ---------- ENSP00000344087/1-1259 QVAQPIPQPQ TEPQLRAPSP DPDLVQRTEA PPQPPPLSTQ PPQGPPEAQL ENSBTAP00000002697/1-1016 QVPPPPPQPQ TEPPPRAPSP DPASGPRAEP PPPPPRPGAQ PPPAPPEAQP 351 400 BACU011994/1-711 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013293/1-1260 ---------- ---------- ---------- ---------- -SEKLFNTVI bmy_00396T0/1-837 ---------- ---------- ---------- ---------- -TAKTCVXIA ENSP00000344087/1-1259 QPAPQPQVQR PPRPQSPTQL LHQNLPPVQA HPSAQSLSQP LSAYNSSSLS ENSBTAP00000002697/1-1016 QPAP-PQAPR PPRPQSPGPL PPQVLPPAQA HPSAQSLPQP LSAYNSSSLS 401 450 BACU011994/1-711 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013293/1-1260 VNKXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_00396T0/1-837 FDR------- ---------- ---------- ---------- ---------- ENSP00000344087/1-1259 LNS------- ---------- ---------- ---------- ---------- ENSBTAP00000002697/1-1016 LNS------- ---------- ---------- ---------- ---------- 451 500 BACU011994/1-711 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013293/1-1260 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_00396T0/1-837 ---------- ---------- ---------- ---------- ---------- ENSP00000344087/1-1259 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002697/1-1016 ---------- ---------- ---------- ---------- ---------- 501 550 BACU011994/1-711 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013293/1-1260 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX bmy_00396T0/1-837 ---------- ---------- ---------- ---------- ---------- ENSP00000344087/1-1259 ---------- ---------- ---------- ---------- ---------- ENSBTAP00000002697/1-1016 ---------- ---------- ---------- ---------- ---------- 551 600 BACU011994/1-711 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013293/1-1260 XXXXXXXXXX XSSRSSTPAK TQPGPPHASH HPSASPFPLS LPNHSPLHSF bmy_00396T0/1-837 ---------L GAYCKITASF SRPD------ ---------- ---------- ENSP00000344087/1-1259 ---------L SSSRSSTPAK TQPAPPHISH HPSASPFPLS LPNHSPLHSF ENSBTAP00000002697/1-1016 ---------L SSSRSSTPAK TQPAPPHISH HPSASPFPLS LPNHSPLHSF 601 650 BACU011994/1-711 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013293/1-1260 TPTLQPPAHS HHPNMFAPPT ALPPPPPLTS GSLQVPGHPA GGTYSEQDIL bmy_00396T0/1-837 ---------- -----FGPSS TW-------- ---------- -SFIAQQDIL ENSP00000344087/1-1259 TPTLQPPAHS HHPNMFAPPT ALPPPPPLTS GSLQVAGHPA GSTYSEQDIL ENSBTAP00000002697/1-1016 TPTLQPPAHS HHPNMFAPPT ALPPPPPLTS GSLQVPGHPA GSTYSEQDIL 651 700 BACU011994/1-711 ---------- ---------- ---------- ---------- ---------- ENSTTRP00000013293/1-1260 RQELNTRFLA SQSADRGASL GPPPYLRTEF HQHQHQHQHT HQHTHQHTFT bmy_00396T0/1-837 RQELNTRFLA SQSADRGASL GPPPYLRTEF HQHQHQHQHT HQHTHQHTFT ENSP00000344087/1-1259 RQELNTRFLA SQSADRGASL GPPPYLRTEF HQHQHQHQHT HQHTHQHTFT ENSBTAP00000002697/1-1016 RQELNTRFLA SQSADRGASL GPPPYLRTEF HQHQHQHQHT HQHTHQHTFT 701 750 BACU011994/1-711 ---------- -MPTPAPPM- ------FDKY PTKVDPFYRH SLFHSYPPAV ENSTTRP00000013293/1-1260 PFPHALPPAA IMPTPAPPM- ------FDKY PTKVDPFYRH SLFHSYPPAV bmy_00396T0/1-837 PFPHALPPTA IMPTPAPPMV RTPGRNFDKY PTKVDPFYRH SLFHSYPPAV ENSP00000344087/1-1259 PFPHAIPPTA IMPTPAPPM- ------FDKY PTKVDPFYRH SLFHSYPPAV ENSBTAP00000002697/1-1016 PFPHALPPTA IMPTPAPPM- ------FDKY PTKVDPFYRH SLFHSYPPAV 751 800 BACU011994/1-711 SGIPPMI--P PTGPFGSLQG AFQPKTSNPI DVAARPGTVP HTLLQKDP-- ENSTTRP00000013293/1-1260 SGIPPMIRLX XXXXXXXXXX XXXXXTSNPI DVAARPGTVP HTLLQKDPRL bmy_00396T0/1-837 SGIPPMI--P PTGPFGSLQG AFQPKTSNPI DVAARPGTVP HTLLQKDPRL ENSP00000344087/1-1259 SGIPPMI--P PTGPFGSLQG AFQPKTSNPI DVAARPGTVP HTLLQKDPRL ENSBTAP00000002697/1-1016 SGIPPMI--P PTGPFGSLQG AFQPKTSNPI DVATRPGTVP HTLLQKDPRL 801 850 BACU011994/1-711 --------RK PGKWCAMHVH IAWQIYHHQQ KVKKQMQSDP HKLDFGLKPE ENSTTRP00000013293/1-1260 TDPFRPMLRK PGKWCAMHVH IAWQIYHHQQ KVKKQMQSDP HKLDFGLKPE bmy_00396T0/1-837 TDPFRPMLRK PGKWCAMHVH IAWQIYHHQQ KVKKQMQSDP HKLDFGLKPE ENSP00000344087/1-1259 TDPFRPMLRK PGKWCAMHVH IAWQIYHHQQ KVKKQMQSDP HKLDFGLKPE ENSBTAP00000002697/1-1016 TDPFRPMLRK PGKWCAMHVH IAWQIYHHQQ KVKKQMQSDP HKLDFGLKPE 851 900 BACU011994/1-711 FLSRPPGPSL FGAIHHPHDL ARPSTLFSAA GAAHPTGTPF GPPPHHSNFL ENSTTRP00000013293/1-1260 FLSRPPGPSL FGAIHHPHDL ARPSTLFSAA GAAHPTGTPF GPPPHHSNFL bmy_00396T0/1-837 FLSRPPGPSL FGAIHHPHDL ARPSTLFSAA GAAHPAGTPF GPPPHHSNFL ENSP00000344087/1-1259 FLSRPPGPSL FGAIHHPHDL ARPSTLFSAA GAAHPTGTPF GPPPHHSNFL ENSBTAP00000002697/1-1016 FLSRPPGPSL FGAIHHPHDL ARPSTLFSAA GAAHPTGTPF GPPPHHSNFL 901 950 BACU011994/1-711 NPAAHLEPFN RPSTFTGLAA VGGNAFGGLG NPSVTPNSVF GHKDGPSVQN ENSTTRP00000013293/1-1260 NPAAHLEPFN RPSTFTGLAA VGGNAFGGLG NPSVTPNSVF GHKDGPSVQN bmy_00396T0/1-837 NPAAHLEPFN RPSTFTGLAA VGGNAFGGLG NPSVTPNSVF GHKDGPSVQN ENSP00000344087/1-1259 NPAAHLEPFN RPSTFTGLAA VGGNAFGGLG NPSVTPNSMF GHKDGPSVQN ENSBTAP00000002697/1-1016 TPAAHLEPFN RPSTFTGLAA VGGNAFGGLG NPSVTPNSVF GHKDGPSVQS 951 1000 BACU011994/1-711 FSNPHEPWNR LHRTPPSFPT PPPWLKPGEL ERSASAAAHD RDRDVDKRDS ENSTTRP00000013293/1-1260 FSNPHEPWNR LHRTPPSFPT PPPWLKPGEL ERSASAAAHD RDRDVDKRDS bmy_00396T0/1-837 FSNPHEPWNR LHRTPPSFPT PPPWLKPGEL ERSASAAAHD RDRDVDKRDS ENSP00000344087/1-1259 FSNPHEPWNR LHRTPPSFPT PPPWLKPGEL ERSASAAAHD RDRDVDKRDS ENSBTAP00000002697/1-1016 FSNPHEPWNR LHRTPPSFPT PPPWLKPGEL ERSASAAAHD RDRDVDKRDS 1001 1050 BACU011994/1-711 SVSKDDKERE SVEKRHSSHP SPAPVLPGST LGHGRSSTEQ IRGHLSTEAR ENSTTRP00000013293/1-1260 SVSKDDKERE SVEKRHSSHP SPAPVLPGST LGHGRSSTEQ IRAHLSTEAR bmy_00396T0/1-837 SVSKDDKERE SVEKRHSSHP SPAPVLPGST LGHGRSSTEQ IRGHLSTEAR ENSP00000344087/1-1259 SVSKDDKERE SVEKRHSSHP SPAPVLPVNA LGHTRSSTEQ IRAHLNTEAR ENSBTAP00000002697/1-1016 SVSKDDKERE SVEKRHSSHP SPAPVLPVST LGHGRSSSEQ IRGHLSTEAR 1051 1100 BACU011994/1-711 EKDKSKDRER EHAESRKDLG TDEHKAKEGP LPEKDGHGHG HEGRGAGEEA ENSTTRP00000013293/1-1260 EKDKSKDRER EHSESRKDLG ADEHKAKEGP LPEKDGHGHG HEGRGAGEEA bmy_00396T0/1-837 EKDKSKDRER EHSESRKDLG ADEHKAKEGP LPEKDGHGHG HEGRGAGEEA ENSP00000344087/1-1259 EKDKPKERER DHSESRKDLA ADEHKAKEGH LPEKD--GHG HEGRAAGEEA ENSBTAP00000002697/1-1016 EKDKCKDRER EHSESRKDLG TDEHKAKEGP LAEKD--GHG HEGRTAGEEA 1101 1150 BACU011994/1-711 KQLARVPSPY ARVPASDSAR PGSAASREAE PRKGEPAYEN PKKSAEGKVX ENSTTRP00000013293/1-1260 KQLARVPSPY ARVPASDSAR PGSAASREAE PRKGEPAYEN PKKSAEVKV- bmy_00396T0/1-837 KQLARVPSPY ARVPASDSAR PGSAASREAE PRKGEPAYEN PKKSAEVKV- ENSP00000344087/1-1259 KQLARVPSPY VRTPVVESAR PNSTSSREAE PRKGEPAYEN PKKSSEVKV- ENSBTAP00000002697/1-1016 KQLARVPSPY ARAPAADSAR PGSAASRDAE PRKGEPAYEN PKKSAEVKV- 1151 1200 BACU011994/1-711 XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX ENSTTRP00000013293/1-1260 ---------- --KEERKEDH DLPAEAPQSH RSSEPPPPPP PPSSSASVHP bmy_00396T0/1-837 ---------- --KEERKEDH DLPAEAPQTH RSSE--PPPP PPSSSASVHP ENSP00000344087/1-1259 ---------- --KEERKEDH DLPPEAPQTH RASE----PP PPNSSSSVHP ENSBTAP00000002697/1-1016 ---------- --KEERKEDH DLPPEAPPTH RSSEPPPPPP PPSSSAGVHP 1201 1250 BACU011994/1-711 XXXXXXXXXX XXXXXXXXXX XXXLGRGWMM KTFMGISPIP GGERFPYPPF ENSTTRP00000013293/1-1260 GPLASMPMTV GVTGIHPMNS ISSLDRTRMM TPFMGISPIP GGERFPYPPF bmy_00396T0/1-837 GPLASMPMTV GVTGIHPMNS ISSLDRTRMM TPFMGISPIP GGERFPYPPF ENSP00000344087/1-1259 GPLASMPMTV GVTGIHPMNS ISSLDRTRMM TPFMGISPLP GGERFPYPSF ENSBTAP00000002697/1-1016 GPLASMPVAV GMPGIHPMNS ISGLDRTRMM TPFMGLSPIP GGERFPYPSF 1251 1300 BACU011994/1-711 HWDPIRDPLR DPYRELDIHR RAPLGRDFLL RSDPLHRLSA PRLYEADRSF ENSTTRP00000013293/1-1260 HWDPIRDPLR DPYRELDIHR RDPLGRDFLL RSDPLHRLSA PRLYEADRSF bmy_00396T0/1-837 HWDPIRDPLR DPYRELDIHR RDPLGRDFLL RSDPLHRLSA PRLYEADRSF ENSP00000344087/1-1259 HWDPIRDPLR DPYRELDIHR RDPLGRDFLL RNDPLHRLST PRLYEADRSF ENSBTAP00000002697/1-1016 HWDPIRDPLR DPYRELDIHR RDPLGRDFLL RNDPLHRLST PRLYEADRSF 1301 1350 BACU011994/1-711 RDREPHDY-- -HHHHHHHPL SVDARREHER GAHLDERERL HMLREDFEHP ENSTTRP00000013293/1-1260 RDREPHDY-- -HHHHHHHPL SVDARREHER GAHLDERERL HVLREDYEHP bmy_00396T0/1-837 RDREPHDY-- -HHHHHHHPL SVDARREHER GAHLDERERL HMLREDFEHP ENSP00000344087/1-1259 RDREPHDYS- HHHHHHHHPL SVDPRREHER GGHLDERERL HMLREDYEHT ENSBTAP00000002697/1-1016 RDREPHDYNH HHHHHHHHPL AVDPRREHER GAHLDERERL HVLREDYEHP 1351 1400 BACU011994/1-711 RLHPVHPASL DGHLPHPGLI APGLPSMHYP RISPTAGHQN GLLNKTPPTA ENSTTRP00000013293/1-1260 RLHAVHPASL DGHLPHPGLI APGLPSMHYP RISPTAGHQN GLLNKTPPTA bmy_00396T0/1-837 RLHPVHPASL DGHLPHPGLI APGLPSMHYP RISPTAGHQN GLLNKTPPTA ENSP00000344087/1-1259 RLHSVHPASL DGHLPHPSLI TPGLPSMHYP RISPTAGNQN GLLNKTPPTA ENSBTAP00000002697/1-1016 RLHPVHPASL DGHLPHPGLL TPGLPSMHYP RISPTAGHQN GLLNKTPPTA 1401 1450 BACU011994/1-711 ALSAPPPLIS TLGGRPVSPR RTTPLSAEIR ERPPSHTLKD IEAR ENSTTRP00000013293/1-1260 ALSAPPPLIS TLGGRPVSPR RTTPLSAEIR ERPPSHTLKD IEAR bmy_00396T0/1-837 ALSAPPPLIS TLGGRPVSPR RTTPLSAEIR ERPPSHTLKD IEAR ENSP00000344087/1-1259 ALSAPPPLIS TLGGRPVSPR RTTPLSAEIR ERPPSHTLKD IEAR ENSBTAP00000002697/1-1016 ALSAPPPLIS TLGGRPVSPR RTTPLSAEIR ERPPSHTLKD IEAR