KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:52 2014 Check: 00 .. Name: BACU005319/1-480 Len: 615 Check: 2211 Weight: 1.00 Name: ENSP00000337088/1-615 Len: 615 Check: 1682 Weight: 1.00 Name: ENSBTAP00000002705/1-610 Len: 615 Check: 3346 Weight: 1.00 Name: bmy_10188T0/1-588 Len: 615 Check: 8611 Weight: 1.00 Name: ENSTTRP00000008416/1-615 Len: 615 Check: 8819 Weight: 1.00 // 1 50 BACU005319/1-480 MGLKAAQKTL FPLRSIDDVV RLFAAELGRE EPDLVLLSLV LGFVEHFLAV ENSP00000337088/1-615 MGLKAAQKTL FPLRSIDDVV RLFAAELGRE EPDLVLLSLV LGFVEHFLAV ENSBTAP00000002705/1-610 MGLKAAQKTL FPLRSIDDVV RLFAAELGRE EPDLVLLSLV LGFVEHFLAV bmy_10188T0/1-588 MGLKAAQKTL FPLRSIDDVV RLFAAELGRE EPDLVLLSLV LGFVEHFLAV ENSTTRP00000008416/1-615 MGLKAAQKTL FPLRSIDDVV RLFAAELGRE EPDLVLLSLV LGFVEHFLAV 51 100 BACU005319/1-480 NRVIPTNVPE LTFQPSPAPD PPGGLTYFPV ADLSIIAALY ARFTAQIRGA ENSP00000337088/1-615 NRVIPTNVPE LTFQPSPAPD PPGGLTYFPV ADLSIIAALY ARFTAQIRGA ENSBTAP00000002705/1-610 NRVIPTNVPE LTFQPSPAPD PPGGLTYFPV ADLSIIAALY ARFTAQIRGA bmy_10188T0/1-588 NRVIPTNVPE LTFQPSPAPD PPGGLTYFPV ADLSIIAALY ARFTAQIRGA ENSTTRP00000008416/1-615 NRVIPTNVPE LTFQPSPAPD PPGGLTYFPV ADLSIIAALY ARFTAQIRGA 101 150 BACU005319/1-480 VDLSLYPREG GVSSRELVKK VSDVIWNSLS RSYFKDRAHI QSLFSFI--- ENSP00000337088/1-615 VDLSLYPREG GVSSRELVKK VSDVIWNSLS RSYFKDRAHI QSLFSFITGW ENSBTAP00000002705/1-610 VDLSLYPREG GVSSRELVKK VSDVIWNSLS RSYFKDRAHI QSLFSFI--- bmy_10188T0/1-588 VDLSLYPREG GVSSRELVKK VSDVIWNSLS RSYFKDRAHI QSLFSFI--- ENSTTRP00000008416/1-615 VDLSLYPREG GVSSRELVKK VSDVIWNSLS RSYFKDRAHI QSLFSFITGW 151 200 BACU005319/1-480 --TGTKLDSS GVAFAVVGAC QALGLRDVHL ALSEDHAWVV FGPNGEQTAE ENSP00000337088/1-615 SPVGTKLDSS GVAFAVVGAC QALGLRDVHL ALSEDHAWVV FGPNGEQTAE ENSBTAP00000002705/1-610 --TGTKLDSS GVAFAVVGAC QALGLRDVHL ALSEDHAWVV FGPNGEQTAE bmy_10188T0/1-588 --TGTKLDSS GVAFAVVGAC QALGLRDVHL ALSEDHAWVV FGPNGEQTAE ENSTTRP00000008416/1-615 SPTGTKLDSS GVAFAVVGAC QALGLRDVHL ALSEDHAWVV FGPNGEQTAE 201 250 BACU005319/1-480 VTWHGKGNED RRGQTVNAGV AERSWLYLKG SYMRCDRKME VAFMVCAINP ENSP00000337088/1-615 VTWHGKGNED RRGQTVNAGV AERSWLYLKG SYMRCDRKME VAFMVCAINP ENSBTAP00000002705/1-610 VTWHGKGNED RRGQTVNAGV AERSWLYLKG SYMRCDRKME VAFMVCAINP bmy_10188T0/1-588 VTWHGKGNED RRGQTVNAGV AERSWLYLKG SYMRCDRKME VAFM------ ENSTTRP00000008416/1-615 VTWHGKGNED RRGQTVNAGV AERSWLYLKG SYMRCDRKME VAFMVCAINP 251 300 BACU005319/1-480 SIDLHTDSLE LLQLQQKLLW LLYDLGHLER YPMALGNLAD LEELEPTPGR ENSP00000337088/1-615 SIDLHTDSLE LLQLQQKLLW LLYDLGHLER YPMALGNLAD LEELEPTPGR ENSBTAP00000002705/1-610 SIDLHTDSLE LLQLQQKLLW LLYDLGHLER YPMALGNLAD LEELEPTPGR bmy_10188T0/1-588 ---------- ------KLLW LLYDLGHLER YPMALGNLAD LEELEPTPGR ENSTTRP00000008416/1-615 SIDLHTDSLE LLQLQQKLLW LLYDLGHLER YPMALGNLAD LEELEPTPGR 301 350 BACU005319/1-480 PDPLTLYHKG IASAKTYYRD EHIYPYMYLA GYHCRNRNVR EALQAWADTA ENSP00000337088/1-615 PDPLTLYHKG IASAKTYYRD EHIYPYMYLA GYHCRNRNVR EALQAWADTA ENSBTAP00000002705/1-610 PDPLTLYHKG IASAKTYYRD EHIYPYMYLA GYHCRNRNVR EALQAWADTA bmy_10188T0/1-588 PDPLTLYHKG IASAKTYYRD EHIYPYMYLA GYHCRNRNVR EALQAWADTA ENSTTRP00000008416/1-615 PDPLTLYHKG IASAKTYYRD EHIYPYMYLA GYHCRNRNVR EALQAWADTA 351 400 BACU005319/1-480 TVIQDYNYCR EDEEIYKEFF EVANDVIPNL LKEAASLLEA GEERPGEQTQ ENSP00000337088/1-615 TVIQDYNYCR EDEEIYKEFF EVANDVIPNL LKEAASLLEA GEERPGEQSQ ENSBTAP00000002705/1-610 TVIQDYNYCR EDEEIYKEFF EVANDVIPNL LKEAASLLEA GEERPGEQTQ bmy_10188T0/1-588 TVIQDYNYCR EDEEIYKEFF EVANDVIPNL LKEAASLLEA GEERPGEQTQ ENSTTRP00000008416/1-615 TVIQDYNYCR EDEEIYKEFF EVANDVIPNL LKEAASLLEA GEERPGEQTQ 401 450 BACU005319/1-480 GTQSQGSALQ DPECFAHLLR FYDGICKWEE GSPTPVLHVG WATFLVQSLG ENSP00000337088/1-615 GTQSQGSALQ DPECFAHLLR FYDGICKWEE GSPTPVLHVG WATFLVQSLG ENSBTAP00000002705/1-610 GTQSQGSALQ DPECFAHLLR FYDGICKWEE GSPTPVLHVG WATFLVQSLG bmy_10188T0/1-588 GTQSQGSALQ DPECFAHLLR FYDGICKWEE GSPTPVLHVG WATFLVQSLG ENSTTRP00000008416/1-615 GTQSQGSALQ DPECFAHLLR FYDGICKWEE GSPTPVLHVG WATFLVQSLG 451 500 BACU005319/1-480 RFEGQVQL-- ----REAQA- ---------- ---------- ---------- ENSP00000337088/1-615 RFEGQVRQKV RIVSREAEAA EAEEPWGEEA REGRRRGPRR ESKPEEPPPP ENSBTAP00000002705/1-610 RFEGQVRQKV RIVSREAEAA EAEEPWGEEA REGRRRGPRR ESKPEEPPPP bmy_10188T0/1-588 RFEGQVRQKV RIVSREAEAA EAEEPWGEEA REGRRRGPRR ESKPEEPPPP ENSTTRP00000008416/1-615 RFEGQVRQKV RIVSREAEAA EAEEPWGEEA REGRRRGPRR ESKPEEPPPP 501 550 BACU005319/1-480 ---------- ---------- -------PSQ NRGSNLRPNQ CWLRVASSP- ENSP00000337088/1-615 KKPALDKGLG TGQGAVSGPP RKPPGTVAGT ARGPEGGSTA QVPAPTASPP ENSBTAP00000002705/1-610 KKPALDKGPG AGQGAVPGPP RKPPGTVPGT ARGAEGGSAA PVPAPAASPP bmy_10188T0/1-588 KKPALDKGTG AGQGAVPGPP RKPPGTVPST ARGPEGGSAA PALAPAASPP ENSTTRP00000008416/1-615 KKPALDKGPG AGQGAVPGPP RKPPGTVPST ARGPEGGSAA AALAPAASPP 551 600 BACU005319/1-480 ---------- ---------- ---------- ---------- ---------- ENSP00000337088/1-615 PEGPVLTFQS EKMKGMKELL VATKINSSAI KLQLTAQSQV QMKKQKVSTP ENSBTAP00000002705/1-610 PEGPVLTFQS EKMKGMKELL VATKINSSAI KLQLTAQSQV QMKKQKVSTP bmy_10188T0/1-588 PEGPVLTFQS EKMKGMKELL VATKINSSAI KLQLTAQSQV QMKKQKVSTP ENSTTRP00000008416/1-615 PEGPVLTFQS EKMKGMKELL VATKINSSAI KLQLTAQSQV QMKKQKVSPP 601 650 BACU005319/1-480 ---------- ----- ENSP00000337088/1-615 SDYTLSFLKR QRKGL ENSBTAP00000002705/1-610 SDYTLSFLKR QRKGL bmy_10188T0/1-588 SDYTLSFLKR QRKGL ENSTTRP00000008416/1-615 SDYTLSFLKR QRKGL