KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:18:53 2014 Check: 00 .. Name: ENSP00000264553/1-257 Len: 264 Check: 9839 Weight: 1.00 Name: ENSBTAP00000002709/1-258 Len: 264 Check: 5667 Weight: 1.00 Name: bmy_06633T0/1-250 Len: 264 Check: 3009 Weight: 1.00 Name: BACU006549/1-250 Len: 264 Check: 2437 Weight: 1.00 // 1 50 ENSP00000264553/1-257 MEACVSSLLV LALGALSVGS S-FGTQIIGG REVIPHSRPY MASLQR-NGS ENSBTAP00000002709/1-258 -----MLLLL VVLEALWAGG NTFETHIIGG RDAVPHSRPY MVSLQKSSGS bmy_06633T0/1-250 -----MLLLL AVLGALWAGG NTFETHIIGG REAAPNSHPY MVSLQK-SGS BACU006549/1-250 -----MLPLL AVLGALWAGG NTFETHIIGG REAAPNSHPY MVSLQK-SGS 51 100 ENSP00000264553/1-257 HLCGGVLVHP KWVLTAAHCL AQRMAQLRLV LGLHTLDSPG LTFHIKAAIQ ENSBTAP00000002709/1-258 HQCGGVLLHQ NWVLTAAHCL TQPTQQLRLV LGLHVLGEIS PIYRIRKVVR bmy_06633T0/1-250 HLCGGVLVHR QWVLTAAHCL THPTQLLRLV LGLHVLGDPG LTCRIREVVL BACU006549/1-250 HLCGGVLVHR QWVLTAAHCL THPTQLLRLV LGLHVLGDPG LTCRIREVVL 101 150 ENSP00000264553/1-257 HPRYKPVPAL ENDLALLQLD GKVKPSRTIR PLALPSKRQV VAAGTRCSMA ENSBTAP00000002709/1-258 HPEYKPVPHL ENDLALLKLD GKVKPSRTIQ PLALPRGRQM VATGTRCSLA bmy_06633T0/1-250 HPEYKPAPHL KNDLALVKLD GKVKPSKTIR PLALPRGRQA VAAGARCSVA BACU006549/1-250 HPEYKPAPHL ENDLALVKLD GKVKPSKTIR PLALPRGCQA VAAGARCSVA 151 200 ENSP00000264553/1-257 GWGLTHQGGR LSRVLRELDL QVLDTRMCNN SRFWNGSLSP SMVCLAADSK ENSBTAP00000002709/1-258 GWGLTHQPGN LARVLQELDV HVLDTRMCNN SRFWHGNISS HMICLAADSK bmy_06633T0/1-250 GWGLTHQGGQ LARALQELDM HVLDAKMCNN SRFWHGGISP RMICLAAHSK BACU006549/1-250 GWGLTHQGGQ LARALQKLDM HVLDAKMCNN SRFWHGGISP RMICLAAHSK 201 250 ENSP00000264553/1-257 DQAPCKGDSG GPLVCGKGRV LARVLSFSSR VCTDIFKPPV ATAVAPYVSW ENSBTAP00000002709/1-258 NQAPCKGDSG GPVVCKRGQV -AGILSFSSE NCTDIFKPPV AVAVAPYMPW bmy_06633T0/1-250 NQAPCKGDSG GPVMCSRGQV -AGILSFSSK VCTDIFKPPV ATAVAPYTSW BACU006549/1-250 NQAPCKGDSG GPVMCSRGQV -AGILSFSSE VCTDIFRPPV ATAVAPYTSW 251 300 ENSP00000264553/1-257 IRKVTGRSA- ---- ENSBTAP00000002709/1-258 IKKVLRHNGS PPSP bmy_06633T0/1-250 IKKIIGH--- ---- BACU006549/1-250 IKKIIGH--- ----