KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 5 Type: P Thu May 15 16:18:56 2014 Check: 00 .. Name: ENSP00000287934/1-647 Len: 652 Check: 774 Weight: 1.00 Name: ENSTTRP00000011498/1-644 Len: 652 Check: 8301 Weight: 1.00 Name: ENSBTAP00000002720/1-645 Len: 652 Check: 6669 Weight: 1.00 Name: bmy_14989T0/1-644 Len: 652 Check: 5279 Weight: 1.00 Name: BACU016867/1-514 Len: 652 Check: 3459 Weight: 1.00 // 1 50 ENSP00000287934/1-647 MAEEEAPKKS RAA---GGGA SWELCAGALS ARLAEEGSGD AGGRRRP-PV ENSTTRP00000011498/1-644 MAEEEAPKKS RAA--AASGA SWELCAGTLR TGPVAEGSGD VGSRRRPPRV ENSBTAP00000002720/1-645 MAEEEAPKKS RAAGGGGGGG SWELCAGALR TVPAAEGSGD AGSRRRP-PA bmy_14989T0/1-644 MAEEEAPKKS RAA--AGSGA SWELCAGALR TGPVAEGSGD AGSCRRTLPV BACU016867/1-514 ---------- ---------- ---------- ---------- ---------- 51 100 ENSP00000287934/1-647 DPRRLARQLL LLLWLLEAPL LLGVRAQAAG QGPGQGPGPG QQPPPPPQQQ ENSTTRP00000011498/1-644 DSGRLARGVL LLIWLLEAPL LLGVRAQAAG QGPGPG---- -QQPPPPQQQ ENSBTAP00000002720/1-645 DSRRLARRLL LLLWLLEAPL LLGVRAQAAG QGPGPG---- -QQPPPPQQQ bmy_14989T0/1-644 DSGRLARGLL LLLWLLEAPL LLGVRAQAAG QGPGPG---- -QQPPPPQQQ BACU016867/1-514 ---------- ---------- ---------- ---------- ---------- 101 150 ENSP00000287934/1-647 QSGQQYNGER GISVPDHGYC QPISIPLCTD IAYNQTIMPN LLGHTNQEDA ENSTTRP00000011498/1-644 QSGQQYNGER GISIPDHGYC QPISIPLCTD IAYNQTIMPN LLGHTNQEDA ENSBTAP00000002720/1-645 QSGQQYNGER GISIPDHGYC QPISIPLCTD IAYNQTIMPN LLGHTNQEDA bmy_14989T0/1-644 QSGQQYNGER GISIPDHGYC QPISIPLCTD IAYNQTIMPN LLGHTNQEDA BACU016867/1-514 ---------- ---------- ---------- -------MPN LLGHTNQEDA 151 200 ENSP00000287934/1-647 GLEVHQFYPL VKVQCSAELK FFLCSMYAPV CTVLEQALPP CRSLCERARQ ENSTTRP00000011498/1-644 GLEVHQFYPL VKVQCSAELK FFLCSMYAPV CTVLEQALPP CRSLCERARQ ENSBTAP00000002720/1-645 GLEVHQFYPL VKVQCSAELK FFLCSMYAPV CTVLEQALPP CRSLCERARQ bmy_14989T0/1-644 GLEVHQFYPL VKVQCSAELK FFLCSMYAPV CTVLEQALPP CRSLCERARQ BACU016867/1-514 GLEVHQFYPL VKVQCSAELK FFLCSMYAPV CTVLEQALPP CRSLCERARQ 201 250 ENSP00000287934/1-647 GCEALMNKFG FQWPDTLKCE KFPVHGAGEL CVGQNTSDKG TPTPSLLPEF ENSTTRP00000011498/1-644 GCEALMNKFG FQWPDTLKCE KFPVHGAGEL CVGQNTSDKG TPTPSLLPEF ENSBTAP00000002720/1-645 GCEALMNKFG FQWPDTLKCE KFPVHGAGEL CVGQNTSDKG TPTPSLLPEF bmy_14989T0/1-644 GCEALMNKFG FQWPDTLKCE KFPVHGAGEL CVGQNTSDKG TPTPSLLPEF BACU016867/1-514 GCEALMNKFG FQWPDTLKCE KFPVHGAGEL CVGQNTSDKG TPTPSLLPEF 251 300 ENSP00000287934/1-647 WTSNPQHGGG GHR-GGFPGG AGASERGKFS CPRALKVPSY LNYHFLGEKD ENSTTRP00000011498/1-644 WTSNPQHGGG GYRGGGFAGG AGASERGKFS CPRALKVPSY LNYHFLGEKD ENSBTAP00000002720/1-645 WTSNPQHGGG GHRGGGFAGG AGASERGKFS CPRALKVPSY LNYHFLGEKD bmy_14989T0/1-644 WTSNPQHGGG GFRGGGFAGG AGASERGKFS CPRALKVPSY LNYHFLGEKD BACU016867/1-514 WTSNPQHGGG GFRGGGFAGG AGASERGKFS CPRALKVPSY LNYHFLGEKD 301 350 ENSP00000287934/1-647 CGAPCEPTKV YGLMYFGPEE LRFSRTWIGI WSVLCCASTL FTVLTYLVDM ENSTTRP00000011498/1-644 CGAPCEPTKV YGLMYFGPEE LRFSRTWIGI WSVLCCASTL FTVLTYLVDM ENSBTAP00000002720/1-645 CGAPCEPTKV YGLMYFGPEE LRFSRTWIGI WSVLCCASTL FTVLTYLVDM bmy_14989T0/1-644 CGAPCEPTKV YGLMYFGPEE LRFSRTWIGI WSVLCCASTL FTVLTYLVDM BACU016867/1-514 CGAPCEPTKV YGLMYFGPEE LRFSRTWIGI WSVLCCASTL FTVLTYLVDM 351 400 ENSP00000287934/1-647 RRFSYPERPI IFLSGCYTAV AVAYIAGFLL EDRVVCNDKF AEDGARTVAQ ENSTTRP00000011498/1-644 RRFSYPERPI IFLSGCYTAV AVAYIAGFLL EDRVVCNDKF AEDGARTVAQ ENSBTAP00000002720/1-645 RRFSYPERPI IFLSGCYTAV AVAYIAGFLL EDRVVCNDKF AEDGARTVAQ bmy_14989T0/1-644 RRFSYPERPI IFLSGCYTAV AVAYIAGFLL EDRVVCNDKF AEDGARTVAQ BACU016867/1-514 RRFSYPERPI IFLSGCYTAV AVAYIAGFLL EDRVVCNDKF AEDGARTVAQ 401 450 ENSP00000287934/1-647 GTKKEGCTIL FMMLYFFSMA SSIWWVILSL TWFLAAGMKW GHEAIEANSQ ENSTTRP00000011498/1-644 GTKKEGCTIL FMMLYFFSMA SSIWWVILSL TWFLAAGMKW GHEAIEANSQ ENSBTAP00000002720/1-645 GTKKEGCTIL FMMLYFFSMA SSIWWVILSL TWFLAAGMKW GHEAIEANSQ bmy_14989T0/1-644 GTKKEGCTIL FMMLYFFSMA SSIWWVILSL TWFLAAGMKW GHEAIEANSQ BACU016867/1-514 GTKKEGCTIL FMMLYFFSMA SSIWWVILSL TWFLAAGMKW GHEAIEANSQ 451 500 ENSP00000287934/1-647 YFHLAAWAVP AIKTITILAL GQVDGDVLSG VCFVGLNNVD ALRGFVLAPL ENSTTRP00000011498/1-644 YFHLAAWAVP AIKTITILAL GQVDGDVLSG VCFVGLNNVD ALRGFVLAPL ENSBTAP00000002720/1-645 YFHLAAWAVP AIKTITILAL GQVDGDVLSG VCFVGLNNVD ALRGFVLAPL bmy_14989T0/1-644 YFHLAAWAVP AIKTITILAL GQVDGDVLSG VCFVGLNNVD ALRGFVLAPL BACU016867/1-514 YFHLAAWAVP AIKTITILAL GQVDGDVLSG VCFVGLNNVD ALRGFVLAPL 501 550 ENSP00000287934/1-647 FVYLFIGTSF LLAGFVSLFR IRTIMKHDGT KTEKLEKLMV RIGVFSVLYT ENSTTRP00000011498/1-644 FVYLFIGTSF LLAGFVSLFR IRTIMKHDGT KTEKLEKLMV RIGVFSVLYT ENSBTAP00000002720/1-645 FVYLFIGTSF LLAGFVSLFR IRTIMKHDGT KTEKLEKLMV RIGVFSVLYT bmy_14989T0/1-644 FVYLFIGTSF LLAGFVSLFR IRTIMKHDGT KTEKLEKLMV RIGVFSVLYT BACU016867/1-514 FVYLFIGTSF LLAGFVSLFR IRTIMKHDGT KTEKLEKLMV RIGVFSVLYT 551 600 ENSP00000287934/1-647 VPATIVIACY FYEQAFRDQW ERSWVAQSCK SYAIPCPHLQ AGGGAPPHPP ENSTTRP00000011498/1-644 VPATIVIACY FYEQAFRDQW ERSWVAQSCK SYAIPCPHLQ A-GGAPPHPP ENSBTAP00000002720/1-645 VPATIVIACY FYEQAFRDQW ERSWVAQSCK SYAIPCPHLQ A-GGAPPHPP bmy_14989T0/1-644 VPATIVIACY FYEQAFRDQW ERSWVAQSCK SYAIPCPHLQ A-GGAPPHPP BACU016867/1-514 VPATIVIACY FYEQAFRDQW ERSWVAQSCK SYAIPCPHLQ A-GGAPPHPP 601 650 ENSP00000287934/1-647 MSPDFTVFMI KYLMTLIVGI TSGFWIWSGK TLNSWRKFYT RLTNSKQGET ENSTTRP00000011498/1-644 MSPDFTVFMI KYLMTLIVGI TSGFWIWSGK TLNSWRKFYT RLTNSKQGET ENSBTAP00000002720/1-645 MSPDFTVFMI KYLMTLIVGI TSGFWIWSGK TLNSWRKFYT RLTNSKQGET bmy_14989T0/1-644 MSPDFTVFMI KYLMTLIVGI TSGFWIWSGK TLNSWRKFYT RLTNSKQGET BACU016867/1-514 MSPDFTVFMI KYLMTLIVGI TSGFWIWSGK TLNSWRKFYT RLTNSKQGET 651 700 ENSP00000287934/1-647 TV ENSTTRP00000011498/1-644 TV ENSBTAP00000002720/1-645 TV bmy_14989T0/1-644 TV BACU016867/1-514 TV