KEY: ENSP* - Homo sapiens (Human) ENSBTA* - Bos taurus (Cow) ENSTTR* - Tursiops truncatus (Dolphin) bmy_* - Balaena mysticetus (Bowhead whale) BACU* - Balaenoptera acutorostrata (Minke whale) Copy from below the line for a valid .msf file. ---------------------------------------------------------------------------------- NoName MSF: 4 Type: P Thu May 15 16:18:56 2014 Check: 00 .. Name: ENSP00000371789/1-404 Len: 407 Check: 7539 Weight: 1.00 Name: ENSBTAP00000002733/1-404 Len: 407 Check: 42 Weight: 1.00 Name: bmy_08925T0/1-356 Len: 407 Check: 240 Weight: 1.00 Name: ENSTTRP00000008040/1-404 Len: 407 Check: 8784 Weight: 1.00 // 1 50 ENSP00000371789/1-404 MATGGGAEEE RKRGRPQLLP PARPAARGEE ADGGREKMGW AQVVKNLAEK ENSBTAP00000002733/1-404 MATGGGAEEE RKRGRPQLLG PARPSTRAEE AEGGREKMGW AQVVKNLAEK bmy_08925T0/1-356 MATGGGAEEE RKRGRTQLLS LARPAARAEE AEGGHEKMGW AQVVKNLAEK ENSTTRP00000008040/1-404 MATGGGAEEE RKRGRTQLLS LARPAARAEE AEGGREKMGW AQVVKNLAEK 51 100 ENSP00000371789/1-404 KGEFREPRPP RREEESGGGG GSAGLGGPAG LAAPDLGDFP PAGRGDPKGR ENSBTAP00000002733/1-404 KGEFRESRPP RREEE-SGSG AGGGLGAPAG LATPSLGDFP PAGRGDPKGR bmy_08925T0/1-356 KGEFRESRPP RREEE-GGNG ARGGLSAPAG LAAPGLGDFP PAGRGDPKGR ENSTTRP00000008040/1-404 KGEFRESRPP RREEE-GGNG ARGGLSVPAG LAAPGLGDFP PAGRGDPKGR 101 150 ENSP00000371789/1-404 RRDPAGEAVD PRKKKGAAEA GRRKKAEAAA AAMATPARPG EAEDAAERPL ENSBTAP00000002733/1-404 RRDPAGEAAD SRKKKGAAEA GRRKKAE--A AAMTTPARPD AAEDAADRPP bmy_08925T0/1-356 RRDPAGEATD ARKKKGAAEA GRRKKAE--A AAMAAPAKPD AAEDAAERPP ENSTTRP00000008040/1-404 RRDPAGEATD ARKKKGAAEA GRRKKAE--V AAMAAPAKPD AAEDAAERPP 151 200 ENSP00000371789/1-404 QDE---PAAA AAGPGKGRFL VRICFQGDEG ACPTRDFVVG ALILRSIGMD ENSBTAP00000002733/1-404 QDEQATAAGS AAGPGKGRFL VRICFQGDEG ACPTRDFVVG ALILRSIGMD bmy_08925T0/1-356 QDEQATAAGP AAGPGKGRFL VRICFQGDEG ACPTRDFVVG ALILRSIGMD ENSTTRP00000008040/1-404 QDEQATPAGP AAGPGKGRFL VRICFQGDEG ACPTRDFVVG ALILRSIGMD 201 250 ENSP00000371789/1-404 PSDIYAVIQI PGSREFDVSF RSAEKLALFL RVYEEKREQE DCWENFVVLG ENSBTAP00000002733/1-404 PSDIYAVIQI PGSREFDVSF RSAEKLALFL RVYEEKREQE DCWENFVVLG bmy_08925T0/1-356 PSDIYAVIQI PGSREFDVSF RSAEKLALFL RVYEEKREQE DCWENFVVLG ENSTTRP00000008040/1-404 PSDIYAVIQI PGSREFDVSF RSAEKLALFL RVYEEKREQE DCWENFVVLG 251 300 ENSP00000371789/1-404 RSKSSLKTLF ILFRNETVDV EDIVTWLKRH CDVLAVPVKV TDRFGIWTGE ENSBTAP00000002733/1-404 RSKSSLKTLF ILFRNETVDV EDIVTWLKRH CDVLAVPVKV TDRFGIWTGE bmy_08925T0/1-356 RSKSSLKTLF ILFRNETVDV EDIVTWLKRH CDVLAVPVKV TDRFGIWTGE ENSTTRP00000008040/1-404 RSKSSLKTLF ILFRNETVDV EDIVTWLKRH CDVLAVPVKV TDRFGIWTGE 301 350 ENSP00000371789/1-404 YKCEIELRQG EGGVRHLPGA FFLGAERGYS WYKGQPKTCF KCGSRTHMSG ENSBTAP00000002733/1-404 YKCEIELRQG EGGVRHLPGA FFLGAERGYS WYKGQPKTCF KCGSRTHMSG bmy_08925T0/1-356 YKCEIELRQG EGGVRHLPGA FFLGAERGYS WYKGQPKTCF KCGSRTHMSG ENSTTRP00000008040/1-404 YKCEIELRQG EGGVRHLPGA FFLGAERGYS WYKGQPKTCF KCGSRTHMSG 351 400 ENSP00000371789/1-404 SCTQDRCFRC GEEGHLSPYC RKGIVCNLCG KRGHAFAQCP KAVHNSVAAQ ENSBTAP00000002733/1-404 SCTQDRCFRC GEEGHLSPYC RKGIVCNLCG KRGHAFAQCP KAVHNSVGAQ bmy_08925T0/1-356 SCTQDR---- -ESA------ ---------- ---------- ---------- ENSTTRP00000008040/1-404 SCTQDRCFRC GEEGHLSPYC RKGIVCNLCG KRGHAFAQCP KAVHNSVAAQ 401 450 ENSP00000371789/1-404 LTGVAGH ENSBTAP00000002733/1-404 LTGVAGH bmy_08925T0/1-356 ------- ENSTTRP00000008040/1-404 LTGVAGH