KEY:
    ENSP* - Homo sapiens (Human)
    ENSBTA* - Bos taurus (Cow)
    ENSTTR* - Tursiops truncatus (Dolphin)
    bmy_* - Balaena mysticetus (Bowhead whale)
    BACU* - Balaenoptera acutorostrata (Minke whale)

Copy from below the line for a valid .msf file.

----------------------------------------------------------------------------------
                
NoName   MSF: 5  Type: P  Thu May 15 16:18:56 2014  Check: 00 ..

 Name: bmy_07841T0/1-134         Len:    194  Check:  8538  Weight:  1.00
 Name: BACU014462/1-180          Len:    194  Check:  1683  Weight:  1.00
 Name: ENSTTRP00000012588/1-117  Len:    194  Check:  2496  Weight:  1.00
 Name: ENSP00000301488/1-126     Len:    194  Check:  8834  Weight:  1.00
 Name: ENSBTAP00000002738/1-127  Len:    194  Check:  9496  Weight:  1.00

//


                          1                                                   50
bmy_07841T0/1-134         --MKPFGGNR ANLVQGLERR GEASLPRADL LLAHVAAGSV PSPSGSVPGA 
BACU014462/1-180          MSYKPIALAP SSTPG----- PSTPVP---- -----TAGSV PSPSGSVPGA 
ENSTTRP00000012588/1-117  ---------P SSTPGSSTRG PGTPVP---- -----T-GSV PSPSGSVPGA 
ENSP00000301488/1-126     MSYKPIAPAP SSTPGSSTPG PGTPVP---- -----T-GSV PSPSGSVPGA 
ENSBTAP00000002738/1-127  MSYKPIAPAP SSTPGSSTPG PGTPVP---- -----TAGSV PSPSGSVPGA 


                          51                                                 100
bmy_07841T0/1-134         AAPFRPLFND FGPPSMGYVQ AMKPPGAQGS QSTYTDLLSV IEEMGKEIRP 
BACU014462/1-180          AAPFRPLFND FGPPSMGYVQ AVKPPGAQGS QSTYTDLLSV IEEMGKEIRP 
ENSTTRP00000012588/1-117  AAPFRPLFND FGPPSMGYVQ AMKPPGAQGS QSTYTDLLSV IEEMGKEIRP 
ENSP00000301488/1-126     GAPFRPLFND FGPPSMGYVQ AMKPPGAQGS QSTYTDLLSV IEEMGKEIRP 
ENSBTAP00000002738/1-127  AGPFRPLFND FGPPSMGYVQ AMKPPGAQGS QSTYTDLLSV IEEMGKEIRP 


                          101                                                150
bmy_07841T0/1-134         TYAGSKSAME RLKRGIIHAR ALVRECLAET ERNART---- ---------- 
BACU014462/1-180          TYAGSKSAME RLKRGINHAQ ALGRECLAET EWNARMQQDS TPSQHLDLSW 
ENSTTRP00000012588/1-117  TYAGSKSAME RLKRGIIHAR ALVRECLAET ERNART---- ---------- 
ENSP00000301488/1-126     TYAGSKSAME RLKRGIIHAR ALVRECLAET ERNART---- ---------- 
ENSBTAP00000002738/1-127  TYAGSKSAME RLKRGIIHAR ALVRECLAET ERNART---- ---------- 


                          151                                                200
bmy_07841T0/1-134         ---------- ---------- ---------- ---------- ---- 
BACU014462/1-180          PLQSTCFSLA FTLSCTSHPG LPVLCPLVGA LQEPVGGSHS SRQH 
ENSTTRP00000012588/1-117  ---------- ---------- ---------- ---------- ---- 
ENSP00000301488/1-126     ---------- ---------- ---------- ---------- ---- 
ENSBTAP00000002738/1-127  ---------- ---------- ---------- ---------- ----